BDGP Sequence Production Resources |
Search the DGRC for LD24653
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 246 |
Well: | 53 |
Vector: | pOT2 |
Associated Gene/Transcript | VhaAC39-1-RA |
Protein status: | LD24653.pep: gold |
Preliminary Size: | 1907 |
Sequenced Size: | 1808 |
Gene | Date | Evidence |
---|---|---|
CG2934 | 2001-01-01 | Release 2 assignment |
CG2934 | 2001-11-29 | Blastp of sequenced clone |
CG2934 | 2003-01-01 | Sim4 clustering to Release 3 |
VhaAC39 | 2008-04-29 | Release 5.5 accounting |
VhaAC39 | 2008-08-15 | Release 5.9 accounting |
VhaAC39 | 2008-12-18 | 5.12 accounting |
1808 bp (1808 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069530
> LD24653.complete AAAATATAAGAAGAGGAAGAGTTGAAAATCATATGACTTGTCGATCGATA GAGAAAAAAGGTTGAATTTTCACCGTCGCTCCGTATCGAACTGCACGCCC TTCGCCACACAATTCGCGCAACTTTCGGTCGAGCGAGAGCAGTCCCATAG AAAGGAATCCAGCGCAATTCGCCACCTCTTCAACTTCCAGTCAGCTCCTC TGCGTGTGTGTGTGTGCGTGTGTCATCAAGATGAACAGCTCGGGCTTTAT GTTTAACATCGATAATGGATATCTGGAGGGTCTGTGCCGCGGCTTCAAGT GCGGCATCCTGAAGCAGGCTGACTATCTCAACCTGGTGCAGTGCGAGACC TTGGAGGATCTCAAGCTGCATCTGCAGGGAACGGACTATGGCAGCTTCCT GGCCAACGAGCCCTCGCCCTTGTCGGTGTCCGTCATTGACGACAAGTTGC GCGAAAAGCTGGTCATCGAGTTCCAGCACATGAGGAACCATGCTGTGGAG CCGCTGTCCAACTTTCTGGACTTCATTACCTACGGTTATATGATCGACAA CATCATTCTGCTGATCACTGGCACGCTGCACCAGCGACCCATCTCGGAGC TGATCCCCAAGTGCCACCCTCTGGGCAGCTTTGAGCAGATGGAAGCCATC CATGTGGCGTCCACTCCCGCTGAGCTCTACAACGCCGTCCTCGTGGACAC GCCACTGGCGCCCTTCTTCGTCGACTGCATCTCCGAGCAGGATCTGGATG AGATGAACATCGAGATCATTCGTAACACCCTTTACAAGGCCTACCTGGAG GCGTTCTACAACTTTTGCAAGAACATGGGTGGTGCCACCGCCGACGTCAT GTGCGAGATCCTGGCTTTTGAGGCCGATCGTCGTGCAATTATCATTACCA TCAACTCCTTCGGCACCGAGCTGTCCAAGGACGACCGTGCCAAGCTGTAT CCCAACTGCGGCAAAATGTACCCCGATGGCCTAGCCGCTTTGGCGCGAGC CGACGACTACGAGCAGGTGAAGACCGTGGCCGAGTATTATGCGGAGTACG CCGCTTTGTTTGACGGATCCGGCAACAATCCCGGCGACAAGACGCTGGAG GACAAGTTCTTCGAGCACGAGGTGAAGCTGGACGTGTACGCCTTTTTGCA GCAGTTCCACTTCGGTGTCTTCTACGCATACCTCAAGCTGAAGGAGCAGG AGTGCCGTAACATCGTCTGGATCGCCGAGTGCGTTGCCCAGAAGCACCGC GCAAAGATCGACAACTACATACCCATTTTCTAAGCGCGCTAGATGATCGC TAAGCATTTGGCATACAAATAATATTACACGTTTTTTTTTCCTGCCTTTC GATATGCGTTTTTTTTTGTTGTCCCTCTACCCTTGTTATTGAATTGTTTA ATGTATATTATATTATGATACCGAGTCTGTATGTTTGTATGTAGCGAGTA TTATTGCCGGTCCAGGCAAATTTTTGTCAAGTGTTCAGACCCAAGCCTAG ATTTCTCAGTTTCCGCGGCTCCTCCTCCAATTGTTATCAGCATTGGCCCA ATAGATAACTATATAATATGTATTCGGGAGACCCATAGTGTCCCTTCAGG GCTTCGTGTTTGTGTACATATGTATAATTATCGAACGGAACGAAAACAGT TCAAATTGAATGTAGAGAAAAGAAACATCAGCACCATATGTTAACTACTA TATAGAAAATGCATACTTATACAAGAACTACATATGTGAATGATAAATCA ATTATTAAAACATGTTTTCAAACATTCCCTTAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 3775384..3776300 | 867..1781 | 4490 | 99.6 | Plus |
chrX | 22417052 | chrX | 3774784..3775293 | 357..866 | 2520 | 99.6 | Plus |
chrX | 22417052 | chrX | 3774090..3774446 | 1..357 | 1785 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 3774785..3775293 | 358..866 | 99 | -> | Plus |
chrX | 3774090..3774446 | 1..357 | 100 | -> | Plus |
chrX | 3775384..3776300 | 867..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-RA | 1..1053 | 231..1283 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-1-RA | 1..1053 | 231..1283 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-1-RA | 1..1053 | 231..1283 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-RA | 1..1053 | 231..1283 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-1-RA | 1..1053 | 231..1283 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-RA | 20..1800 | 1..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-1-RA | 20..1800 | 1..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-1-RA | 12..1792 | 1..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-RA | 20..1800 | 1..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaAC39-1-RA | 12..1792 | 1..1781 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3880759..3881115 | 1..357 | 100 | -> | Plus |
X | 3881454..3881962 | 358..866 | 99 | -> | Plus |
X | 3882053..3882967 | 867..1781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3880759..3881115 | 1..357 | 100 | -> | Plus |
X | 3881454..3881962 | 358..866 | 99 | -> | Plus |
X | 3882053..3882967 | 867..1781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3880759..3881115 | 1..357 | 100 | -> | Plus |
X | 3881454..3881962 | 358..866 | 99 | -> | Plus |
X | 3882053..3882967 | 867..1781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 3774792..3775148 | 1..357 | 100 | -> | Plus |
arm_X | 3775487..3775995 | 358..866 | 99 | -> | Plus |
arm_X | 3776086..3777000 | 867..1781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3888857..3889213 | 1..357 | 100 | -> | Plus |
X | 3889552..3890060 | 358..866 | 99 | -> | Plus |
X | 3890151..3891065 | 867..1781 | 100 | Plus |
Translation from 230 to 1282
> LD24653.hyp MNSSGFMFNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQG TDYGSFLANEPSPLSVSVIDDKLREKLVIEFQHMRNHAVEPLSNFLDFIT YGYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVASTPAELY NAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYNFCKNMG GATADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPNCGKMYPDG LAALARADDYEQVKTVAEYYAEYAALFDGSGNNPGDKTLEDKFFEHEVKL DVYAFLQQFHFGVFYAYLKLKEQECRNIVWIAECVAQKHRAKIDNYIPIF *
Translation from 230 to 1282
> LD24653.pep MNSSGFMFNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQG TDYGSFLANEPSPLSVSVIDDKLREKLVIEFQHMRNHAVEPLSNFLDFIT YGYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVASTPAELY NAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYNFCKNMG GATADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPNCGKMYPDG LAALARADDYEQVKTVAEYYAEYAALFDGSGNNPGDKTLEDKFFEHEVKL DVYAFLQQFHFGVFYAYLKLKEQECRNIVWIAECVAQKHRAKIDNYIPIF *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21182-PA | 350 | GF21182-PA | 1..350 | 1..350 | 1869 | 99.7 | Plus |
Dana\GF18027-PA | 350 | GF18027-PA | 5..346 | 8..349 | 886 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18679-PA | 350 | GG18679-PA | 1..350 | 1..350 | 1869 | 99.7 | Plus |
Dere\GG12455-PA | 350 | GG12455-PA | 2..347 | 5..349 | 890 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17612-PA | 352 | GH17612-PA | 1..350 | 1..350 | 1842 | 97.7 | Plus |
Dgri\GH21449-PA | 351 | GH21449-PA | 2..348 | 3..349 | 948 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaAC39-1-PA | 350 | CG2934-PA | 1..350 | 1..350 | 1848 | 100 | Plus |
VhaAC39-2-PA | 350 | CG4624-PA | 4..347 | 7..349 | 863 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16480-PA | 350 | GI16480-PA | 1..350 | 1..350 | 1859 | 98.6 | Plus |
Dmoj\GI10510-PA | 351 | GI10510-PA | 2..348 | 3..349 | 912 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14761-PA | 350 | GL14761-PA | 1..350 | 1..350 | 1864 | 99.4 | Plus |
Dper\GL23045-PA | 348 | GL23045-PA | 2..345 | 5..349 | 910 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15530-PA | 350 | GA15530-PA | 1..350 | 1..350 | 1864 | 99.4 | Plus |
Dpse\GA18311-PA | 348 | GA18311-PA | 2..345 | 5..349 | 917 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12314-PA | 350 | GM12314-PA | 1..350 | 1..350 | 1873 | 100 | Plus |
Dsec\GM23587-PA | 350 | GM23587-PA | 2..347 | 5..349 | 890 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16660-PA | 215 | GD16660-PA | 1..212 | 1..212 | 1134 | 100 | Plus |
Dsim\GD18401-PA | 368 | GD18401-PA | 2..327 | 5..329 | 810 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16024-PA | 350 | GJ16024-PA | 1..350 | 1..350 | 1859 | 98.6 | Plus |
Dvir\GJ23190-PA | 352 | GJ23190-PA | 2..349 | 3..349 | 992 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10228-PA | 350 | GK10228-PA | 1..350 | 1..350 | 1869 | 99.7 | Plus |
Dwil\GK16475-PA | 350 | GK16475-PA | 1..350 | 1..350 | 1845 | 98 | Plus |
Dwil\GK22588-PA | 353 | GK22588-PA | 4..349 | 5..349 | 1016 | 51.4 | Plus |