BDGP Sequence Production Resources |
Search the DGRC for LD24661
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 246 |
Well: | 61 |
Vector: | pOT2 |
Associated Gene/Transcript | Sec6-RA |
Protein status: | LD24661.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2401 |
Gene | Date | Evidence |
---|---|---|
CG5341 | 2001-01-01 | Release 2 assignment |
CG5341 | 2001-09-19 | Blastp of sequenced clone |
CG5341 | 2003-01-01 | Sim4 clustering to Release 3 |
sec6 | 2008-04-29 | Release 5.5 accounting |
sec6 | 2008-08-15 | Release 5.9 accounting |
sec6 | 2008-12-18 | 5.12 accounting |
2401 bp (2401 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058549
> LD24661.complete AGCACTTCCACTGCTGACGAAGATTGACCAAAACAGAGACTGAAAGTGAT CCAAATAAATTGAAGATGGATTTACAGCAGCTGGAGGAGCAGGCTCGCCA GGCAGCGCTCAAGGACATACAGAACATGTTGCAGCGACCAGGTCAACTGG AGAAGGTGGAACAATATCGCCACCGAATCGCCCGGAAGAAGGCATCCGTT GAGGCGCTCCTTAAGACCGGAATGCAAGGACAGCTGGACGGGGTCAGGGT GGGACTTAAGCAGTTGGAGACCTGCATGCAGGACGTGCGCGAGGTAAGGC GTCGAATGGACGAGGTGGAGCGCCTGCTGAGGGGCGTTCCCGAAGTCTAC GACGCTTTGGAAGTTGTGCGGGAGGAAAACACAAAGCACTCCCAGTACGC CACCGCCATGGAGAATCTGAAGCACATCTTCAACGTAGATGCCAGCGTAC AAAAGACGATGGCGCTGATCGAGGATGATAAGCTGCTTAATGCCCATCAG TGCCTGGCGGATCTGGAGAATTCGCGGGATGATCTTCTCTACGAACTGCA CAAGCAGCCCAAGCAGCATGCGTCCGACAAGATCACCCTAAAGCGTCACT TCGAGAAGGTTGACACGGTATCCCAAGAGCTGGAGAAAAAGCTGCGACTC ATTCTTAGCCGCACGCTGAACACTCTGCGCAAGAAGCCCACCATCATCGT TACCGCCCTACGCATCATAGAGCGGGAAGAGAAAAACGACCAGTTCGCGT TGCAGCAGCAAAAGGTCACAGGATTCCTGCCGCCTGGAAGACCAAAGGCT TGGCGCCGCATGATCATGGACGTGCTACAACAGTCGGTGATAACGCGCAT AGAGGGATCCAAGCTAGAGGAGCGGGCCGATAACAAGATGTGGTTAGTAC GAGACCTGGAGATATTGCGTCAAATCATTCTCGAGGATCTGCGCGTTGTG AAGTCCCTTTGTGTGCCCTGCTTCCCGCCGCACTACGACATTTTCGGCGA ATATGTCAAGTTCTATCACGAAGGACTTTCTAGCTATCTTGACAACATTG TGCGCTCGGGCTTGGAGGGCAATGAATATGTATCAATGATGGCTTGGGTT ACACACACCTATCCTGGCGTCGAGCTGATGTCCCATCCGGATCTTAATGT GGATGTACACCGACAGATAGGTACTCTGCTGCGTCCGGAACATCTCAAAG CGCTGGAAGATGAATATCTGCAAAATATGCAGAGAAACTTCCAGGAATGG ATGACCAAGGCCGCAGAAACGGAGAAGCAGGAGTGGTTTACTGAGACGGT GCCCGATCAGGATGAGGAGTACTACCACACTTCAGCGCCTGTCATCATAT TCCAGATGATCGACCAGCATCTGCAGGTGACCAACACAATTCATCAGGAA CTGACGTTCAAGGCGTTGGTAATGAGCATTCAGCAGGTGGAGATCTTTGG CCAGACATATCTTAAGAACGTAATCGAGCTGAAGGAACACCATTTTCGCA ATCGGGACCAGATCAAATACTTCACTCACTACATCATCACCATCGTGAAT AACAGTCAGCAAATGGTTGAACTGGCGCAGCAGATGAAACAACTCTACTG GCCCAAGTCACGTACTGAGCATTATGAGGATTTCGAACGTTTGCTTGCCA CATTCCAGCGGATCCGGGCTCATGCCGCAAGTTACTTGCTGGAGGAAGCC TTCCTGGACATGGAGTGTCACTTTAACGACCTATTCACTGCCAAGTGGCT GGCCAGTAACATTGCCGTGGACACCATTTGTGTAACGCTGGACGATTACT TCCAGGACTATAATCACCTGCGACCCAATAACTTCGAGATGGTCATCAAC GAGGCCCAGAAGCTGCTGGCCAAGCGCTACATTAGGGCACTGCTATCCAA GCGACTGTCTAAGCCACGGGCCGAGTGCGATGCCATTACGCGAAAAATCA AGACCGAAGCCAAGCGGTTTAAGCTCTTCTTTGAGAAAATCGCGCCGAAG ATTTCCCTCAGCGACTCTCCATTGGATCTTATATCCACGCTATCGGCACT GCTTAGCTCGGATATCGAACTGCTCGTCTTGGACCTGCACACCTTGCTGG GCAGCTATCCGTCTCTGAACGAGGACCACCTGGTACGGCTCTTTTACATT CGCAACGATGTGAAGGCGGCCGAGGTGCGCGAGAAGGTGCAGGATGCCAT GAAGTCGAAGAAGGCAATGGTCAGCATCGCCAAGCAGGATTGCATCTTCA AGGAGATCGTGTTCAGCGACAAACTGTGGTAGACCTTGGAGTATAGTTCC CAACCCATTCCGCATGTCCCTTTCTGTTCAGTATCGTATTTACTCTTAAG CTGCGATTGTAATATTATTGTGCTTTAAAAAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sec6-RA | 2502 | sec6-RA | 78..2454 | 1..2377 | 11885 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G6 | 2042 | G6 G6_DM 2042bp | 512..578 | 673..742 | 127 | 69 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14512398..14513434 | 1..1037 | 99 | -> | Plus |
chr2R | 14513500..14514838 | 1038..2376 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec6-RA | 1..2217 | 66..2282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec6-RA | 1..2217 | 66..2282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec6-RA | 1..2217 | 66..2282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec6-RA | 1..2217 | 66..2282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec6-RA | 1..2217 | 66..2282 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec6-RA | 12..2387 | 1..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec6-RA | 12..2387 | 1..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec6-RA | 30..2405 | 1..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec6-RA | 12..2387 | 1..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec6-RA | 30..2405 | 1..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18625278..18626314 | 1..1037 | 100 | -> | Plus |
2R | 18626380..18627718 | 1038..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18625278..18626314 | 1..1037 | 100 | -> | Plus |
2R | 18626380..18627718 | 1038..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18625278..18626314 | 1..1037 | 100 | -> | Plus |
2R | 18626380..18627718 | 1038..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14512783..14513819 | 1..1037 | 100 | -> | Plus |
arm_2R | 14513885..14515223 | 1038..2376 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18626477..18627513 | 1..1037 | 100 | -> | Plus |
2R | 18627579..18628917 | 1038..2376 | 100 | Plus |
Translation from 65 to 2281
> LD24661.pep MDLQQLEEQARQAALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLK TGMQGQLDGVRVGLKQLETCMQDVREVRRRMDEVERLLRGVPEVYDALEV VREENTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNAHQCLADL ENSRDDLLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRT LNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMI MDVLQQSVITRIEGSKLEERADNKMWLVRDLEILRQIILEDLRVVKSLCV PCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAWVTHTYP GVELMSHPDLNVDVHRQIGTLLRPEHLKALEDEYLQNMQRNFQEWMTKAA ETEKQEWFTETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKA LVMSIQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQM VELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHAASYLLEEAFLDME CHFNDLFTAKWLASNIAVDTICVTLDDYFQDYNHLRPNNFEMVINEAQKL LAKRYIRALLSKRLSKPRAECDAITRKIKTEAKRFKLFFEKIAPKISLSD SPLDLISTLSALLSSDIELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVK AAEVREKVQDAMKSKKAMVSIAKQDCIFKEIVFSDKLW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11977-PA | 738 | GF11977-PA | 1..738 | 1..738 | 3837 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21912-PA | 738 | GG21912-PA | 1..738 | 1..738 | 3954 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19933-PA | 738 | GH19933-PA | 1..738 | 1..738 | 3501 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sec6-PA | 738 | CG5341-PA | 1..738 | 1..738 | 3789 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19891-PA | 738 | GI19891-PA | 1..738 | 1..738 | 3518 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17031-PA | 738 | GL17031-PA | 1..738 | 1..738 | 3717 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18815-PA | 738 | GA18815-PA | 1..738 | 1..738 | 3709 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21903-PA | 738 | GM21903-PA | 1..738 | 1..738 | 3949 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11399-PA | 738 | GD11399-PA | 1..738 | 1..738 | 3957 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15060-PA | 738 | GJ15060-PA | 1..738 | 1..738 | 3501 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21967-PA | 738 | GK21967-PA | 1..738 | 1..738 | 3675 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11986-PA | 738 | GE11986-PA | 1..738 | 1..738 | 3954 | 99.7 | Plus |
Translation from 65 to 2281
> LD24661.hyp MDLQQLEEQARQAALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLK TGMQGQLDGVRVGLKQLETCMQDVREVRRRMDEVERLLRGVPEVYDALEV VREENTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNAHQCLADL ENSRDDLLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRT LNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMI MDVLQQSVITRIEGSKLEERADNKMWLVRDLEILRQIILEDLRVVKSLCV PCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAWVTHTYP GVELMSHPDLNVDVHRQIGTLLRPEHLKALEDEYLQNMQRNFQEWMTKAA ETEKQEWFTETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKA LVMSIQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQM VELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHAASYLLEEAFLDME CHFNDLFTAKWLASNIAVDTICVTLDDYFQDYNHLRPNNFEMVINEAQKL LAKRYIRALLSKRLSKPRAECDAITRKIKTEAKRFKLFFEKIAPKISLSD SPLDLISTLSALLSSDIELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVK AAEVREKVQDAMKSKKAMVSIAKQDCIFKEIVFSDKLW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sec6-PA | 738 | CG5341-PA | 1..738 | 1..738 | 3789 | 100 | Plus |