BDGP Sequence Production Resources |
Search the DGRC for LD24704
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 247 |
Well: | 4 |
Vector: | pOT2 |
Associated Gene/Transcript | CG16903-RA |
Protein status: | LD24704.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1932 |
Gene | Date | Evidence |
---|---|---|
CG16903 | 2001-09-19 | Blastp of sequenced clone |
CG16903 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16903 | 2008-04-29 | Release 5.5 accounting |
CG16903 | 2008-08-15 | Release 5.9 accounting |
CG16903 | 2008-12-18 | 5.12 accounting |
1932 bp (1932 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058550
> LD24704.complete TTATCGGCTAAATTTACAAAAAAAAAGGGAAAATTAAAAAATTAAAACAC TTAAATAAACGCTTTCCTGGGTTAACCGCGCACGAATGGCCACCCGTGGG GCCGGCTCGACTGTGGTCCACACGACGGTGACAGCGCTGACGGTGGAGAC GATCACCAATGTCCTGACCACGGTGACTTCGTTCCATTCGAACAGCGTCA ACATTTCGAACAACAACAGCAGCAGTGGAGCGGCCCCGGGGGCGGATGCA GCTGGCGGCGATGCAGGGGGCGTGGCAGCGGCTCAGGCGGACGCCAACAA GCCTATCTATCCTCGGCTCTTTAACCGCATCGTGCTGACGCTGGAGAACA GCCTCATTCCGGAGGGCAAAATCGATGTGACGCCATCCAGCCAGGATGGA CTGGACCATGAGACGGAGAAGGACCTGCGCATACTGGGCTGCGAGCTTAT TCAGACAGCCGGAATTTTGCTGCGCTTGCCGCAGGTTGCCATGGCCACCG GCCAGGTGCTGTTCCAGCGCTTCTTCTACTCGAAGAGCTTTGTGCGGCAC AACATGGAGACTGTGGCCATGAGCTGCGTGTGCCTGGCGTCCAAGATCGA GGAGGCGCCGCGCCGCATTAGAGACGTGATCAATGTGTTCCATCACATCA AGCAAGTGCGGGCCCAAAAGGAAATCTCGCCCATGGTGCTAGATCCTTAC TACACGAACCTCAAGATGCAGGTGATCAAGGCCGAGCGGCGCGTCCTCAA GGAACTGGGCTTCTGTGTACACGTGAAGCATCCGCACAAGCTGATCGTGA TGTATCTGCAGGTGCTTCAGTACGAGAAGCACGAGAAGCTGATGCAGCTC TCCTGGAACTTCATGAATGACTCGCTGAGGACGGACGTTTTTATGCGCTA CACACCAGAGGCGATTGCATGCGCCTGCATCTACCTGAGTGCCCGCAAGC TCAACATACCTCTGCCCAACAGCCCGCCGTGGTTCGGCATTTTTCGGGTG CCCATGGCGGACATTACGGATATCTGCTACCGTGTGATGGAGCTGTACAT GCGTTCCAAGCCGGTGGTGGAGAAACTGGAGGCGGCCGTGGACGAGCTGA AAAAGCGGTACATTGATGCGCGCAACAAAACGAAGGAGGCAAACACACCG CCGGCTGTAATCACCGTGGATCGGAACAATGGCTCGCACAATGCGTGGGG TGGCTTCATCCAGCGTGCTATCCCACTGCCCTTGCCATCGGAAAAGTCGC CGCAAAAGGATTCGAGGTCACGCTCGCGATCCAGGACGCGCACCCATTCG CGGACACCTCGCTCCCGATCACCCAGGTCCAGGTCGCCTAGTCGCGAGCG CACTAAGAAGACCCACCGCAGTCGATCCTCCCGCTCGCGCTCCCGTTCGC CGCCGAAGCATAAGAAAAAGTCACGTCACTACTCGAGGTCGCCCACGCGC TCCAATTCGCCGCACAGCAAGCACAGGAAGTCGAAATCCTCGCGAGAACG CTCTGAATACTACTCCAAGAAAGATCGGTCTGGAAACCCAGGCAGTAGCA ATAATCTAGGTGATGGCGACAAGTATCGCAACTCCGTCTCCAATTCCGGC AAGCACAGTCGGTACTCCTCCTCCTCGTCGCGTCGGAACAGCGGTGGTGG TGGAGACGGAAGAAGCGGAGGAGGAGGTGGTGGCGGCGGTGGAGGCAACG GGAACCACGGCAGCCGAGGGGGGCACAAGCATCGGGATGGCGATCGCTCC AGGGATCGCAAGCGCTAGTGATTGATAGACAAGCGAGACAAACACTCCCT TATATTTAATTGCTCTTTATTTTACAAATTTACAGATTATTTCTACCGAT TTAGTAATGCTAATGTGTATTGAAAAAACGAACGCGGGTAAACAATAAAT GTAACTCTTCAATCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1972745..1973558 | 1483..670 | 4055 | 99.9 | Minus |
chrX | 22417052 | chrX | 1973628..1974297 | 670..1 | 3350 | 100 | Minus |
chrX | 22417052 | chrX | 1972257..1972688 | 1914..1483 | 2115 | 99.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1972257..1972450 | 1721..1914 | 99 | == | Minus |
chrX | 1972533..1972688 | 1483..1638 | 100 | <- | Minus |
chrX | 1972746..1973558 | 670..1482 | 99 | <- | Minus |
chrX | 1973629..1974297 | 1..669 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 1..1683 | 86..1768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 1..1683 | 86..1768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 1..1683 | 86..1768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 1..1683 | 86..1768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 1..1683 | 86..1768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 1..1914 | 1..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 1..1914 | 1..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 23..1936 | 1..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 1..1914 | 1..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16903-RA | 23..1936 | 1..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2078343..2078774 | 1483..1914 | 100 | <- | Minus |
X | 2078832..2079644 | 670..1482 | 100 | <- | Minus |
X | 2079715..2080383 | 1..669 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2078343..2078774 | 1483..1914 | 100 | <- | Minus |
X | 2078832..2079644 | 670..1482 | 100 | <- | Minus |
X | 2079715..2080383 | 1..669 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2078343..2078774 | 1483..1914 | 100 | <- | Minus |
X | 2078832..2079644 | 670..1482 | 100 | <- | Minus |
X | 2079715..2080383 | 1..669 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1972376..1972807 | 1483..1914 | 100 | <- | Minus |
arm_X | 1972865..1973677 | 670..1482 | 100 | <- | Minus |
arm_X | 1973748..1974416 | 1..669 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2086441..2086872 | 1483..1914 | 100 | <- | Minus |
X | 2086930..2087742 | 670..1482 | 100 | <- | Minus |
X | 2087813..2088481 | 1..669 | 100 | Minus |
Translation from 85 to 1767
> LD24704.pep MATRGAGSTVVHTTVTALTVETITNVLTTVTSFHSNSVNISNNNSSSGAA PGADAAGGDAGGVAAAQADANKPIYPRLFNRIVLTLENSLIPEGKIDVTP SSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSK SFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPM VLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEKHE KLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNSPPWF GIFRVPMADITDICYRVMELYMRSKPVVEKLEAAVDELKKRYIDARNKTK EANTPPAVITVDRNNGSHNAWGGFIQRAIPLPLPSEKSPQKDSRSRSRSR TRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPKHKKKSRHYS RSPTRSNSPHSKHRKSKSSRERSEYYSKKDRSGNPGSSNNLGDGDKYRNS VSNSGKHSRYSSSSSRRNSGGGGDGRSGGGGGGGGGGNGNHGSRGGHKHR DGDRSRDRKR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22225-PA | 558 | GF22225-PA | 1..558 | 1..560 | 2026 | 82.8 | Plus |
Dana\GF15386-PA | 402 | GF15386-PA | 14..243 | 99..325 | 317 | 31.8 | Plus |
Dana\GF18125-PA | 267 | GF18125-PA | 19..248 | 88..330 | 185 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12651-PA | 563 | GG12651-PA | 1..563 | 1..560 | 2246 | 93.4 | Plus |
Dere\GG21466-PA | 401 | GG21466-PA | 14..243 | 99..325 | 315 | 31 | Plus |
Dere\GG15801-PA | 1097 | GG15801-PA | 55..233 | 99..287 | 240 | 30.5 | Plus |
Dere\GG21023-PA | 267 | GG21023-PA | 31..248 | 105..330 | 185 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24522-PA | 617 | GH24522-PA | 101..429 | 62..392 | 1670 | 90.6 | Plus |
Dgri\GH10982-PA | 434 | GH10982-PA | 14..243 | 99..325 | 310 | 31.8 | Plus |
Dgri\GH15353-PA | 1111 | GH15353-PA | 35..229 | 99..300 | 242 | 30.1 | Plus |
Dgri\GH19239-PA | 267 | GH19239-PA | 21..248 | 90..330 | 182 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16903-PA | 560 | CG16903-PA | 1..560 | 1..560 | 2918 | 100 | Plus |
CycK-PC | 400 | CG15218-PC | 14..243 | 99..325 | 302 | 31.4 | Plus |
CycK-PB | 400 | CG15218-PB | 14..243 | 99..325 | 302 | 31.4 | Plus |
CycK-PA | 400 | CG15218-PA | 14..243 | 99..325 | 302 | 31.4 | Plus |
CycT-PC | 1097 | CG6292-PC | 5..488 | 49..554 | 282 | 24.9 | Plus |
CycT-PB | 1097 | CG6292-PB | 5..488 | 49..554 | 282 | 24.9 | Plus |
CG9915-PC | 820 | CG9915-PC | 253..437 | 385..558 | 210 | 36.2 | Plus |
CG9915-PB | 820 | CG9915-PB | 253..437 | 385..558 | 210 | 36.2 | Plus |
CycC-PA | 267 | CG7281-PA | 32..250 | 106..332 | 209 | 27.7 | Plus |
CG9915-PC | 820 | CG9915-PC | 176..349 | 385..556 | 194 | 36.2 | Plus |
CG9915-PB | 820 | CG9915-PB | 176..349 | 385..556 | 194 | 36.2 | Plus |
CG9915-PC | 820 | CG9915-PC | 148..315 | 388..558 | 193 | 36.2 | Plus |
CG9915-PB | 820 | CG9915-PB | 148..315 | 388..558 | 193 | 36.2 | Plus |
CG9915-PC | 820 | CG9915-PC | 190..377 | 385..560 | 192 | 35.1 | Plus |
CG9915-PB | 820 | CG9915-PB | 190..377 | 385..560 | 192 | 35.1 | Plus |
CG9915-PC | 820 | CG9915-PC | 149..333 | 382..554 | 188 | 34.9 | Plus |
CG9915-PB | 820 | CG9915-PB | 149..333 | 382..554 | 188 | 34.9 | Plus |
SRm160-PA | 954 | CG11274-PA | 206..401 | 393..560 | 187 | 33.8 | Plus |
CG9915-PC | 820 | CG9915-PC | 256..450 | 365..556 | 180 | 35.2 | Plus |
CG9915-PC | 820 | CG9915-PC | 60..249 | 380..560 | 180 | 32.8 | Plus |
CG9915-PC | 820 | CG9915-PC | 78..260 | 393..559 | 180 | 33.7 | Plus |
CG9915-PB | 820 | CG9915-PB | 78..260 | 393..559 | 180 | 33.7 | Plus |
CG9915-PB | 820 | CG9915-PB | 60..249 | 380..560 | 180 | 32.8 | Plus |
CG9915-PB | 820 | CG9915-PB | 256..450 | 365..556 | 180 | 35.2 | Plus |
CG9915-PC | 820 | CG9915-PC | 69..291 | 329..548 | 174 | 31.6 | Plus |
CG9915-PB | 820 | CG9915-PB | 69..291 | 329..548 | 174 | 31.6 | Plus |
Srp54-PA | 513 | CG4602-PA | 279..430 | 383..519 | 172 | 36.2 | Plus |
CG9915-PC | 820 | CG9915-PC | 222..405 | 387..560 | 170 | 34.9 | Plus |
CG9915-PB | 820 | CG9915-PB | 222..405 | 387..560 | 170 | 34.9 | Plus |
Srp54-PA | 513 | CG4602-PA | 281..420 | 391..559 | 170 | 35.3 | Plus |
SRm160-PA | 954 | CG11274-PA | 226..409 | 339..560 | 162 | 31.5 | Plus |
BOD1-PC | 1109 | CG5514-PC | 566..747 | 380..560 | 162 | 28.4 | Plus |
BOD1-PA | 1109 | CG5514-PA | 566..747 | 380..560 | 162 | 28.4 | Plus |
BOD1-PD | 1150 | CG5514-PD | 566..747 | 380..560 | 162 | 28.4 | Plus |
BOD1-PB | 1150 | CG5514-PB | 566..747 | 380..560 | 162 | 28.4 | Plus |
BOD1-PE | 1151 | CG5514-PE | 566..747 | 380..560 | 162 | 28.4 | Plus |
CG9915-PC | 820 | CG9915-PC | 315..480 | 387..560 | 158 | 34.1 | Plus |
CG9915-PB | 820 | CG9915-PB | 315..480 | 387..560 | 158 | 34.1 | Plus |
B52-PN | 350 | CG10851-PN | 135..344 | 307..527 | 158 | 28.8 | Plus |
B52-PC | 350 | CG10851-PC | 135..344 | 307..527 | 158 | 28.8 | Plus |
B52-PA | 350 | CG10851-PA | 135..344 | 307..527 | 158 | 28.8 | Plus |
B52-PO | 355 | CG10851-PO | 140..349 | 307..527 | 158 | 28.8 | Plus |
B52-PM | 355 | CG10851-PM | 140..349 | 307..527 | 158 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21601-PA | 587 | GI21601-PA | 1..394 | 1..392 | 1771 | 83.4 | Plus |
Dmoj\GI17494-PA | 415 | GI17494-PA | 14..243 | 99..325 | 319 | 32.2 | Plus |
Dmoj\GI12957-PA | 1147 | GI12957-PA | 49..295 | 95..349 | 256 | 26.8 | Plus |
Dmoj\GI24273-PA | 267 | GI24273-PA | 17..253 | 94..335 | 182 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18224-PA | 540 | GL18224-PA | 1..540 | 1..560 | 2139 | 82.7 | Plus |
Dper\GL26256-PA | 411 | GL26256-PA | 15..232 | 99..325 | 286 | 30.2 | Plus |
Dper\GL25034-PA | 1130 | GL25034-PA | 51..300 | 99..356 | 245 | 26.9 | Plus |
Dper\GL23664-PA | 267 | GL23664-PA | 31..248 | 105..330 | 186 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14208-PA | 540 | GA14208-PA | 1..540 | 1..560 | 2139 | 82.7 | Plus |
Dpse\GA13578-PA | 423 | GA13578-PA | 15..244 | 99..325 | 315 | 31.4 | Plus |
Dpse\GA19492-PA | 1137 | GA19492-PA | 58..307 | 99..356 | 244 | 26.9 | Plus |
Dpse\GA20234-PA | 267 | GA20234-PA | 31..248 | 105..330 | 186 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18920-PA | 559 | GM18920-PA | 1..559 | 1..560 | 2909 | 97.7 | Plus |
Dsec\GM16115-PA | 400 | GM16115-PA | 14..243 | 99..325 | 325 | 31.8 | Plus |
Dsec\GM24323-PA | 1093 | GM24323-PA | 51..233 | 95..287 | 250 | 30.4 | Plus |
Dsec\GM25819-PA | 267 | GM25819-PA | 31..248 | 105..330 | 185 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16393-PA | 559 | GD16393-PA | 1..559 | 1..560 | 2920 | 98 | Plus |
Dsim\GD21618-PA | 400 | GD21618-PA | 14..243 | 99..325 | 322 | 31.8 | Plus |
Dsim\GD12396-PA | 1097 | GD12396-PA | 55..233 | 99..287 | 241 | 30.5 | Plus |
Dsim\GD20395-PA | 267 | GD20395-PA | 31..248 | 105..330 | 188 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16541-PA | 582 | GJ16541-PA | 1..582 | 1..560 | 2026 | 75.7 | Plus |
Dvir\GJ15154-PA | 425 | GJ15154-PA | 14..243 | 99..325 | 323 | 32.2 | Plus |
Dvir\GJ13100-PA | 1142 | GJ13100-PA | 65..307 | 99..349 | 252 | 27.2 | Plus |
Dvir\GJ10846-PA | 267 | GJ10846-PA | 31..253 | 105..335 | 183 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24907-PA | 596 | GK24907-PA | 1..548 | 1..516 | 1890 | 73.6 | Plus |
Dwil\GK15351-PA | 421 | GK15351-PA | 14..243 | 99..325 | 313 | 31.8 | Plus |
Dwil\GK13831-PA | 267 | GK13831-PA | 31..248 | 105..330 | 185 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16978-PA | 562 | GE16978-PA | 1..562 | 1..560 | 2290 | 94.8 | Plus |
Dyak\GE12968-PA | 402 | GE12968-PA | 14..243 | 99..325 | 320 | 31.8 | Plus |
Dyak\GE22136-PA | 1099 | GE22136-PA | 57..235 | 99..287 | 239 | 30.5 | Plus |
Dyak\GE26424-PA | 267 | GE26424-PA | 31..248 | 105..330 | 185 | 28.4 | Plus |
Translation from 85 to 1767
> LD24704.hyp MATRGAGSTVVHTTVTALTVETITNVLTTVTSFHSNSVNISNNNSSSGAA PGADAAGGDAGGVAAAQADANKPIYPRLFNRIVLTLENSLIPEGKIDVTP SSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSK SFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPM VLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEKHE KLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNSPPWF GIFRVPMADITDICYRVMELYMRSKPVVEKLEAAVDELKKRYIDARNKTK EANTPPAVITVDRNNGSHNAWGGFIQRAIPLPLPSEKSPQKDSRSRSRSR TRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPKHKKKSRHYS RSPTRSNSPHSKHRKSKSSRERSEYYSKKDRSGNPGSSNNLGDGDKYRNS VSNSGKHSRYSSSSSRRNSGGGGDGRSGGGGGGGGGGNGNHGSRGGHKHR DGDRSRDRKR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16903-PA | 560 | CG16903-PA | 1..560 | 1..560 | 2918 | 100 | Plus |
CycK-PC | 400 | CG15218-PC | 14..243 | 99..325 | 302 | 31.4 | Plus |
CycK-PB | 400 | CG15218-PB | 14..243 | 99..325 | 302 | 31.4 | Plus |
CycK-PA | 400 | CG15218-PA | 14..243 | 99..325 | 302 | 31.4 | Plus |
CycT-PC | 1097 | CG6292-PC | 5..488 | 49..554 | 282 | 24.9 | Plus |