BDGP Sequence Production Resources |
Search the DGRC for LD24746
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 247 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | shu-RA |
Protein status: | LD24746.pep: gold |
Preliminary Size: | 1659 |
Sequenced Size: | 1687 |
Gene | Date | Evidence |
---|---|---|
CG4735 | 2001-01-01 | Release 2 assignment |
CG4735 | 2001-09-19 | Blastp of sequenced clone |
CG4735 | 2003-01-01 | Sim4 clustering to Release 3 |
shu | 2008-04-29 | Release 5.5 accounting |
shu | 2008-08-15 | Release 5.9 accounting |
shu | 2008-12-18 | 5.12 accounting |
1687 bp (1687 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058554
> LD24746.complete AATAGCGCCAACTCAGCGCATTCCGGAATTCGTTTCGTAAATATTCTGTA AATTTTGCGATAATGGAAGAAAACTTCGAACCGTACACCCCACAGTTGCT CAAGAATCCCTTGTCCTATTCGGATCTCGTGAAAAAGGGCGTTGAGTTCG AGGTCGACAATTCGCAGCAGAACCATGCCAGGGATCTGGGTCTCGACAGC GACAGCGACAGCGACTACGAGGATGCGCTGGACGTGGACGGCGAGGAGCT ACGTTCACCGTGGACATATTCATTCGACGAACTGCGTGCGCTGATGAGCG AGATCGACGAAAACATTTACAAGCGGATCACTCGCACCGGTCACGTGGAT CGGGAGGCGGTGCCGAACAAGGCTAGGGTCTCGGTTCGGTACAGTGGCTA CTGGGAGGGCGAGACCGCTCCCTTCGACTCCTCCCTGCTGCGGGGCAGCA AATTCGTGTTTGAAACTGGCCAGGGAACGGTGGTTGAAGGCCTGGAGGTC GCCGTCCGCAGCATGCGTCCTTACGAGCAGGCCGAGTTTATAATCTCCTA CAAGCTGCTTTTCGGAGAACTCGGTTGCCCTCCGCGGATCAAGCCCAAGG CGGATGCGCTCTTTAAAGTGGAGGTAATTGACTACTCGCTCATAGGAGAT GCGAAGGGCATCGATGCTATCCCCCAAGAAGACCGCGACAAGTTTTGTGT GGTCTATCCGAAGGCTGTCGACTTGCACCTACATGGCAAGGACTCGGTGA AGCTCGGACGCTATCAGAGTGCAGCAACTGCCTTCGAACGGGCAGTGAGC TCACTGAACTACTGCCGAATGGCCAATGACGAGGAGGAGCGCAAGCAAAC TGAACTGCTTACTACCCTGAACCAAAACCTGATGATCGTTTACAACAAGA TGAACAAGCCGAAGCGCGCCTGCATCATGATGAAGGCCTTACGGCACCTG ACCATGGGCAATCCGTCTTGCAAGGCGCTCTTCCAGGAGGGACGCGCCCT GGCCGCTCTGGGCGAGTACAACTTGGCCCGCAACGCTTACCTGCAGGCGC AGGCCAAGCAGCCGGCGAACAAGGAGATCAGCGACGAGATTATCAGCATG AACAAGAGAATCAGCAAGTATGAGGAGGCCAGTCGCGATATATGGGCACG TGCCTTCTCGTTAAAGAACTCAAAGTCAGACGTCCGCAAAACGCCTGCTC AGCTGGAGAAGGAGGCAAAGGAACAGGATTTCAATGACAAAATGGAAGAT TTGATTAGGCGGTTTAAGAACACTTCAGATCAACAAGTGAGCTTTTCACG TAAATCTTATTCGAACGCTCAGTTCGACGCGACTTGCAAATTGGCCAAGG AACACAACCTGAAGCTAACTTTGTCTCCCATCCAAGAGGATGTTCTGACA TTGTCTAAGCCGGATGTTAAGTTCGCTTGAGCTTACTAAGAAGCCCCAGT ATTTCATATTTCATATCTTACTCAAAAAAAAAAACATACCAAACATGAAG GTAATTTAGTTCCAAGTTCTAGAAGAGCAGTATCATTAGTTATTTCGATA TTAGCAACATGAATATCGTAAGCCCAGACGAATGTTAACGTTTTTTGTTA TTTAGAGCAACGTAGACCTTAAGTTGTTAAAAACCACAATAAAAGTAATG CACGGCAGCTACATAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19727550..19728340 | 1664..873 | 3910 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 19728416..19729166 | 872..122 | 3740 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 19729223..19729344 | 122..1 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23841459..23842252 | 1666..873 | 3970 | 100 | Minus |
2R | 25286936 | 2R | 23842328..23843078 | 872..122 | 3755 | 100 | Minus |
2R | 25286936 | 2R | 23843135..23843256 | 122..1 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23842658..23843451 | 1666..873 | 3970 | 100 | Minus |
2R | 25260384 | 2R | 23843527..23844277 | 872..122 | 3755 | 100 | Minus |
2R | 25260384 | 2R | 23844334..23844455 | 122..1 | 610 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19727550..19728340 | 873..1664 | 99 | <- | Minus |
chr2R | 19728416..19729166 | 122..872 | 99 | <- | Minus |
chr2R | 19729224..19729344 | 1..121 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 1..1368 | 63..1430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 1..1368 | 63..1430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 1..1368 | 63..1430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 1..1368 | 63..1430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 1..1368 | 63..1430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 24..1687 | 1..1664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 24..1687 | 1..1664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 31..1694 | 1..1664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 24..1687 | 1..1664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
shu-RA | 31..1694 | 1..1664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23841461..23842252 | 873..1664 | 100 | <- | Minus |
2R | 23842328..23843078 | 122..872 | 100 | <- | Minus |
2R | 23843136..23843256 | 1..121 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23841461..23842252 | 873..1664 | 100 | <- | Minus |
2R | 23842328..23843078 | 122..872 | 100 | <- | Minus |
2R | 23843136..23843256 | 1..121 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23841461..23842252 | 873..1664 | 100 | <- | Minus |
2R | 23842328..23843078 | 122..872 | 100 | <- | Minus |
2R | 23843136..23843256 | 1..121 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19728984..19729775 | 873..1664 | 100 | <- | Minus |
arm_2R | 19729851..19730601 | 122..872 | 100 | <- | Minus |
arm_2R | 19730659..19730779 | 1..121 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23842678..23843469 | 873..1664 | 100 | <- | Minus |
2R | 23843545..23844295 | 122..872 | 100 | <- | Minus |
2R | 23844353..23844473 | 1..121 | 100 | Minus |
Translation from 62 to 1429
> LD24746.pep MEENFEPYTPQLLKNPLSYSDLVKKGVEFEVDNSQQNHARDLGLDSDSDS DYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYKRITRTGHVDREAV PNKARVSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRS MRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKVEVIDYSLIGDAKGI DAIPQEDRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFERAVSSLNY CRMANDEEERKQTELLTTLNQNLMIVYNKMNKPKRACIMMKALRHLTMGN PSCKALFQEGRALAALGEYNLARNAYLQAQAKQPANKEISDEIISMNKRI SKYEEASRDIWARAFSLKNSKSDVRKTPAQLEKEAKEQDFNDKMEDLIRR FKNTSDQQVSFSRKSYSNAQFDATCKLAKEHNLKLTLSPIQEDVLTLSKP DVKFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12456-PA | 453 | GF12456-PA | 1..452 | 1..453 | 1436 | 59.7 | Plus |
Dana\GF19503-PA | 334 | GF19503-PA | 23..301 | 70..359 | 256 | 27.3 | Plus |
Dana\GF14673-PA | 440 | GF14673-PA | 13..130 | 82..207 | 154 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19994-PA | 453 | GG19994-PA | 1..453 | 1..455 | 2095 | 85.3 | Plus |
Dere\GG20452-PA | 195 | GG20452-PA | 1..184 | 151..354 | 333 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22913-PA | 465 | GH22913-PA | 1..465 | 1..453 | 1282 | 55 | Plus |
Dgri\GH24794-PA | 176 | GH24794-PA | 1..176 | 290..453 | 365 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
shu-PA | 455 | CG4735-PA | 1..455 | 1..455 | 2339 | 100 | Plus |
CG30075-PA | 195 | CG30075-PA | 36..188 | 206..358 | 282 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18403-PA | 446 | GI18403-PA | 1..446 | 1..453 | 1297 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11067-PA | 441 | GL11067-PA | 1..437 | 1..449 | 1306 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18393-PA | 441 | GA18393-PA | 1..437 | 1..449 | 1311 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15507-PA | 453 | GM15507-PA | 1..453 | 1..455 | 2281 | 94.1 | Plus |
Dsec\GM21539-PA | 195 | GM21539-PA | 36..188 | 206..358 | 279 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25009-PA | 453 | GD25009-PA | 1..453 | 1..455 | 2280 | 93.8 | Plus |
Dsim\GD11049-PA | 195 | GD11049-PA | 35..188 | 205..358 | 285 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21483-PA | 449 | GJ21483-PA | 8..449 | 9..453 | 1275 | 56.1 | Plus |
Translation from 62 to 1429
> LD24746.hyp MEENFEPYTPQLLKNPLSYSDLVKKGVEFEVDNSQQNHARDLGLDSDSDS DYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYKRITRTGHVDREAV PNKARVSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRS MRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKVEVIDYSLIGDAKGI DAIPQEDRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFERAVSSLNY CRMANDEEERKQTELLTTLNQNLMIVYNKMNKPKRACIMMKALRHLTMGN PSCKALFQEGRALAALGEYNLARNAYLQAQAKQPANKEISDEIISMNKRI SKYEEASRDIWARAFSLKNSKSDVRKTPAQLEKEAKEQDFNDKMEDLIRR FKNTSDQQVSFSRKSYSNAQFDATCKLAKEHNLKLTLSPIQEDVLTLSKP DVKFA*