Clone LD24749 Report

Search the DGRC for LD24749

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:247
Well:49
Vector:pOT2
Associated Gene/Transcriptjumu-RA
Protein status:LD24749.pep: gold
Preliminary Size:3887
Sequenced Size:2828

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4029 2001-01-01 Release 2 assignment
CG4029 2001-10-10 Blastp of sequenced clone
CG4029 2003-01-01 Sim4 clustering to Release 3
jumu 2008-04-29 Release 5.5 accounting
jumu 2008-08-15 Release 5.9 accounting
jumu 2008-12-18 5.12 accounting

Clone Sequence Records

LD24749.complete Sequence

2828 bp (2828 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061327

> LD24749.complete
ACCGGGCGGGTTTATTTTATCATTGCTCCGCGACTTCGAATACGAGACCG
GTGTTGTGCGCTCCTGATAACTGCGATATATTGAGCGCGAGCGCCATGTC
CTTTTGCTGGAAGTAGAATTTGAAAAGTGCAGAGATCACGGCTTGGATTG
CCAAGGAACAACGGTGTTGAGACTGAATATATTTTTTGTGCGCTGTTTCG
AAATAGAACCGTTAATTGGAATTGGCAGTAAGAAGCAGAGAGGCGGACGA
TATTCCGGTGAAATCTTCGCCAGGCGGAAACATCGATCAAAACAAAGTGC
ATGCTAAAAACATAAAAGATTCAACATGTTCGAACTAGAGGATTATTCGA
GCGGCATACATGAGGGATTCTTCAGCAAATATGCGGATGCGGCTGGACCC
TCGCTAGACTTTTATGTATCCGACTCGATGCAGGAGATGCTGAACGTGGA
CATCCGCGCAGAGATCGCCAATGTGGTGGGCAGTTCCAGCAGCGACTTGA
CCTCGTCCCTGGACCAAACACTGGAAGCTATATCCGCGATAAACAACAAC
CAGAGCAATGGAAACAGCAGCCAGTCAGCTTCTTACAATGCGAATGCGAA
TTTTCTGACCAGCAGCGGACTCCACGCCTCACCCACAGCGAAATGGATGG
GCTCGTCGGCCAATTTTTGGTCCAACAGCGATTACTATGCGGATCTGGGG
GCATGTGTGAACCCCATTTCCGTAATGCCACTGATAAATTCGACTTCTGC
AGGAATGTTCTCGCCAAAAAAAAACAAGACAGCCTCAAGTACGCAGGGAA
GATCGGGAGCGGTGCCCTCGTCGCCCAGCGCCGAAAGGGATCAGCACAAA
TCGCACCTGACATTTTCGCCGGCTCAGATGAAGGTCAGTGCAGGATCCAT
GCGGCGGGACCAGGTGATGGCACACATTCCCAAGCAAATATCCGTGGTCA
CGGGCACCGGAACCACAGCGCCCGCCACAATGGCCACCAATTCGGTGCTT
CAACGGCGTAATTCCTCGGCCGTGGATGCTGTACGTAAGGATTTGGTCAC
AGAGCTGCGTAAAGCACAATCCAGTCCAGTGCCCAATTCCTTGGAGGAGC
TGGGCAAGGGAAAAGGATCAACACTGCTAAATGCCAGTGTTGGGGCGACC
AACACCATTAAACTGGCGCCCGGTATCGGTGGGTTAACCTTTGCCAACAG
TGCAGCCTACCAGAAGCTGAAGCAAACATCCTTGGTTAAGTCACCAGGCG
GTATTTCGCCAGGAGCAGGATCCAATATGGGTCTCAAGCGGGAGGACTCA
AACAAGCGAGGACTGCAGGCCAGCACCACGCCAAAGAGCATTGCTTCGGC
GGCAAACTCGCCGCATCATCAAATGCAGAGCAACTACAGCCTGGGATCAC
CTTCATCACTGTCCTCCTCATCTGCATCCTCTCCCCTAGGGAATGTGAGC
AACCTGGTCAACATAGCGAATAACAATACAAGCGGAGCTGGATCCGGCTT
GGTGAAGCCTCTGCAGCAAAAGGTTAAACTGCCACCCGTGGGCAGTCCAT
TTCCCAAACCAGCATACTCGTACTCCTGCCTCATCGCTTTGGCCCTCAAG
AATTCGCGAGCAGGATCCCTTCCGGTCTCGGAAATATATAGTTTCCTATG
CCAGCATTTCCCTTACTTCGAGAATGCCCCCAGCGGCTGGAAGAACAGTG
TGCGTCACAACCTGTCTTTAAACAAATGCTTTGAGAAGATCGAAAGACCA
GCGACGAATGGCAACCAGAGAAAGGGCTGCCGTTGGGCCATGAATCCCGA
TCGTATCAACAAGATGGACGAGGAGGTGCAAAAGTGGTCGCGCAAGGATC
CGGCTGCCATACGTGGAGCCATGGTATATCCTCAGCATCTGGAGTCCCTG
GAAAGGGGAGAGATGAAGCACGGATCGGCAGACTCGGATGTAGAGCTGGA
CTCGCAATCGGAAATTGAGGAGTCTTCGGATCTGGAGGAACACGAATTCG
AGGACACTATGGTGGATGCAATGCTGGTAGAAGAGGAAGACGAGGAGGAG
GACGGGGATGATGATGAGCAAATAATCAACGATTTTGATGCGGAAGATGA
GCGTCATGCCAACGGAAACCAGGCAAACAACCTACCCATCAACCATCCAC
TACTTGGTCAGAAAAGTAACGACTTCGATATAGAGGTCGGGGATCTATAC
GACGCAATCGACATAGAGGATGATAAGGAGTCAGTGCGTCGAATTATCTC
GAATGACCAGCACATCATTGAGTTGAACCCTGCCGATCTGAATGCCACCG
ATGGCTACAACCAGCAGCCGGCATTGAAACGGGCTCGCGTCGACATTAAC
TATGCAATTGGTCCTGCTGGCGAGTTGGAACAGCAATACGGCCAGAAAGT
GAAGGTGCAGCAAGTCATACAGCCGCAGCAGCATCCGCCCACCTACAACA
GGCGCAAGATGCCGCTGGTCAACCGCGTCATCTAGAGCGGGGCACAGCCC
AAAAACCCATTACATTAATCAATTAGTTTTAGACCTTTGGCATTTAAGAA
ACCCATGCTACGCTTAAACGTAATCCTAGAAGCCCCATCATTCAATATCG
AATATCAGTTTTCAGTTTCGTGTGCAAAACCCAAATTGTTATTAAATCTC
CCTTCCTATTTGTAGTTCAGTTTGGCTGCTGTTTGATTTTAAATCTCGAT
TAGAGCCTGTGCCAACTGAAAAAGAGAGATAACTTGTGCCCTTTTGTTTT
TGCTTAATTTAAATCTTTCTATAGTCGCTTCTCGAATAAATCTGTATTAT
ATTGTTCGAAAAAAAAAAAAAAAAAAAA

LD24749.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:11:10
Subject Length Description Subject Range Query Range Score Percent Strand
jumu-RA 4029 jumu-RA 77..2888 1..2812 14060 100 Plus
jumu.a 3562 jumu.a 95..2521 386..2812 12135 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:56:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 6183838..6185640 385..2187 9015 100 Plus
chr3R 27901430 chr3R 6185697..6186321 2184..2808 3125 100 Plus
chr3R 27901430 chr3R 6175950..6176335 1..386 1915 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:16:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10358098..10359900 385..2187 9015 100 Plus
3R 32079331 3R 10359957..10360585 2184..2812 3145 100 Plus
3R 32079331 3R 10350203..10350588 1..386 1930 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 10098929..10100731 385..2187 9015 100 Plus
3R 31820162 3R 10100788..10101416 2184..2812 3145 100 Plus
3R 31820162 3R 10091034..10091419 1..386 1930 100 Plus
Blast to na_te.dros performed on 2019-03-15 15:56:36 has no hits.

LD24749.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:57:33 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 6175950..6176334 1..385 99 -> Plus
chr3R 6183839..6185638 386..2185 100 -> Plus
chr3R 6185699..6186321 2186..2808 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:35:54 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 1..2160 326..2485 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:49:56 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 1..2160 326..2485 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:46:36 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 1..2160 326..2485 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:18:45 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 1..2160 326..2485 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:21:25 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 1..2160 326..2485 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:35:53 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 20..2827 1..2808 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:49:56 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 20..2827 1..2808 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:36 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 22..2829 1..2808 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:18:45 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 20..2827 1..2808 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:21:25 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
jumu-RA 22..2829 1..2808 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:57:33 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10350203..10350587 1..385 100 -> Plus
3R 10358099..10359898 386..2185 100 -> Plus
3R 10359959..10360581 2186..2808 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:57:33 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10350203..10350587 1..385 100 -> Plus
3R 10358099..10359898 386..2185 100 -> Plus
3R 10359959..10360581 2186..2808 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:57:33 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10350203..10350587 1..385 100 -> Plus
3R 10358099..10359898 386..2185 100 -> Plus
3R 10359959..10360581 2186..2808 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:36 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6175925..6176309 1..385 100 -> Plus
arm_3R 6183821..6185620 386..2185 100 -> Plus
arm_3R 6185681..6186303 2186..2808 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:55:39 Download gff for LD24749.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10091034..10091418 1..385 100 -> Plus
3R 10098930..10100729 386..2185 100 -> Plus
3R 10100790..10101412 2186..2808 100   Plus

LD24749.pep Sequence

Translation from 325 to 2484

> LD24749.pep
MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANV
VGSSSSDLTSSLDQTLEAISAINNNQSNGNSSQSASYNANANFLTSSGLH
ASPTAKWMGSSANFWSNSDYYADLGACVNPISVMPLINSTSAGMFSPKKN
KTASSTQGRSGAVPSSPSAERDQHKSHLTFSPAQMKVSAGSMRRDQVMAH
IPKQISVVTGTGTTAPATMATNSVLQRRNSSAVDAVRKDLVTELRKAQSS
PVPNSLEELGKGKGSTLLNASVGATNTIKLAPGIGGLTFANSAAYQKLKQ
TSLVKSPGGISPGAGSNMGLKREDSNKRGLQASTTPKSIASAANSPHHQM
QSNYSLGSPSSLSSSSASSPLGNVSNLVNIANNNTSGAGSGLVKPLQQKV
KLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFEN
APSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMDEE
VQKWSRKDPAAIRGAMVYPQHLESLERGEMKHGSADSDVELDSQSEIEES
SDLEEHEFEDTMVDAMLVEEEDEEEDGDDDEQIINDFDAEDERHANGNQA
NNLPINHPLLGQKSNDFDIEVGDLYDAIDIEDDKESVRRIISNDQHIIEL
NPADLNATDGYNQQPALKRARVDINYAIGPAGELEQQYGQKVKVQQVIQP
QQHPPTYNRRKMPLVNRVI*

LD24749.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17528-PA 725 GF17528-PA 1..725 1..719 2692 77.7 Plus
Dana\GF21122-PA 1236 GF21122-PA 660..749 411..503 256 48.4 Plus
Dana\GF15038-PA 350 GF15038-PA 131..232 411..513 214 43.3 Plus
Dana\GF23559-PA 508 GF23559-PA 70..155 411..498 214 42 Plus
Dana\GF10343-PA 601 GF10343-PA 128..224 410..507 206 44.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17529-PA 723 GG17529-PA 1..723 1..719 3341 95.4 Plus
Dere\GG17614-PA 1274 GG17614-PA 646..777 373..503 272 41.5 Plus
Dere\GG24971-PA 323 GG24971-PA 115..226 405..517 217 41.2 Plus
Dere\GG13233-PA 507 GG13233-PA 70..155 411..498 213 42 Plus
Dere\GG12065-PA 511 GG12065-PA 138..337 358..532 208 31.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19127-PA 775 GH19127-PA 1..775 1..719 2164 63.6 Plus
Dgri\GH12836-PA 1346 GH12836-PA 744..833 411..503 254 48.4 Plus
Dgri\GH15375-PA 508 GH15375-PA 53..155 386..498 214 38.1 Plus
Dgri\GH11193-PA 340 GH11193-PA 126..227 411..513 212 43.3 Plus
Dgri\GH24005-PA 572 GH24005-PA 134..230 410..507 208 45.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:35
Subject Length Description Subject Range Query Range Score Percent Strand
jumu-PA 719 CG4029-PA 1..719 1..719 3691 100 Plus
CHES-1-like-PC 1267 CG12690-PC 338..779 50..493 310 28 Plus
CHES-1-like-PD 1268 CG12690-PD 338..779 50..493 310 28 Plus
CHES-1-like-PB 1268 CG12690-PB 338..779 50..493 310 28 Plus
CHES-1-like-PA 1268 CG12690-PA 338..779 50..493 310 28 Plus
fkh-PD 510 CG10002-PD 44..336 251..532 236 28.2 Plus
fkh-PB 510 CG10002-PB 44..336 251..532 236 28.2 Plus
fkh-PA 510 CG10002-PA 44..336 251..532 236 28.2 Plus
fkh-PE 518 CG10002-PE 44..336 251..532 236 28.2 Plus
fkh-PC 692 CG10002-PC 44..336 251..532 236 28.2 Plus
bin-PA 676 CG18647-PA 74..400 163..500 230 29.2 Plus
croc-PA 508 CG5069-PA 14..193 348..531 221 29.5 Plus
slp1-PA 322 CG16738-PA 20..221 327..513 218 32.4 Plus
fd59A-PA 456 CG3668-PA 4..163 343..491 198 32.5 Plus
FoxK-PP 745 CG11799-PP 391..628 346..562 198 25.9 Plus
FoxK-PJ 746 CG11799-PJ 391..628 346..562 198 25.9 Plus
FoxK-PI 746 CG11799-PI 391..628 346..562 198 25.9 Plus
FoxK-PH 746 CG11799-PH 391..628 346..562 198 25.9 Plus
FoxK-PG 746 CG11799-PG 391..628 346..562 198 25.9 Plus
FoxK-PN 760 CG11799-PN 391..628 346..562 198 25.9 Plus
fd102C-PA 599 CG11152-PA 128..224 410..507 194 44.6 Plus
FoxK-PO 745 CG11799-PO 391..627 346..562 191 26.1 Plus
FoxK-PK 740 CG11799-PK 384..622 352..562 189 26.2 Plus
fd96Ca-PB 372 CG11921-PB 13..98 411..498 188 42.7 Plus
fd96Ca-PA 372 CG11921-PA 13..98 411..498 188 42.7 Plus
fd96Cb-PA 271 CG11922-PA 13..91 411..491 186 44.4 Plus
FoxL1-PB 365 CG1132-PB 91..247 411..564 186 31.7 Plus
FoxL1-PA 365 CG1132-PA 91..247 411..564 186 31.7 Plus
slp2-PA 451 CG2939-PA 180..294 411..519 185 34.2 Plus
fd3F-PC 744 CG44123-PC 292..646 333..648 183 24 Plus
fd19B-PA 260 CG9571-PA 18..136 338..491 163 29.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:16:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23584-PA 758 GI23584-PA 1..758 1..719 2273 65.9 Plus
Dmoj\GI14920-PA 1307 GI14920-PA 714..793 411..493 255 54.2 Plus
Dmoj\GI12979-PA 505 GI12979-PA 53..155 386..498 215 38.1 Plus
Dmoj\GI18113-PA 342 GI18113-PA 124..225 411..513 214 43.3 Plus
Dmoj\GI23783-PA 286 GI23783-PA 13..98 411..498 208 43.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23693-PA 563 GL23693-PA 1..461 1..463 1615 75.1 Plus
Dper\GL15651-PA 422 GL15651-PA 1..224 318..567 722 65.1 Plus
Dper\GL23693-PA 563 GL23693-PA 461..563 624..719 364 72.8 Plus
Dper\GL14605-PA 1270 GL14605-PA 683..775 411..509 260 48.5 Plus
Dper\GL15055-PA 423 GL15055-PA 53..155 386..498 214 38.1 Plus
Dper\GL18682-PA 342 GL18682-PA 132..233 411..513 211 43.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17887-PA 728 GA17887-PA 1..728 1..719 2633 75 Plus
Dpse\GA25156-PA 437 GA25156-PA 58..424 324..713 1214 68.4 Plus
Dpse\GA27773-PA 1263 GA27773-PA 674..766 411..509 260 48.5 Plus
Dpse\GA18636-PA 523 GA18636-PA 70..155 411..498 213 42 Plus
Dpse\GA14117-PA 347 GA14117-PA 137..238 411..513 212 43.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23879-PA 723 GM23879-PA 1..723 1..719 3703 96.4 Plus
Dsec\GM17463-PA 579 GM17463-PA 286..375 411..503 254 48.4 Plus
Dsec\GM18442-PA 322 GM18442-PA 114..225 405..517 217 41.2 Plus
Dsec\GM22139-PA 507 GM22139-PA 70..155 411..498 213 42 Plus
Dsec\GM16286-PA 505 GM16286-PA 132..331 358..532 205 31.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18690-PA 723 GD18690-PA 1..723 1..719 3735 97.1 Plus
Dsim\GD23260-PA 322 GD23260-PA 114..221 405..513 217 42.7 Plus
Dsim\GD12117-PA 491 GD12117-PA 53..155 386..498 213 38.1 Plus
Dsim\GD18028-PA 510 GD18028-PA 137..336 358..532 205 31.7 Plus
Dsim\GD13983-PA 680 GD13983-PA 315..415 411..513 205 39.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:17:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23559-PA 761 GJ23559-PA 1..761 1..719 2339 67.1 Plus
Dvir\GJ18953-PA 1224 GJ18953-PA 649..738 411..503 255 48.4 Plus
Dvir\GJ16300-PA 343 GJ16300-PA 128..233 411..517 215 41.7 Plus
Dvir\GJ13122-PA 508 GJ13122-PA 53..155 386..498 215 38.1 Plus
Dvir\GJ15974-PA 632 GJ15974-PA 144..240 410..507 209 45.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11545-PA 783 GK11545-PA 1..783 1..719 2268 66.1 Plus
Dwil\GK16995-PA 528 GK16995-PA 53..155 386..498 214 38.1 Plus
Dwil\GK16994-PA 686 GK16994-PA 332..458 411..536 213 36.4 Plus
Dwil\GK10997-PA 652 GK10997-PA 112..296 358..526 212 32.1 Plus
Dwil\GK15483-PA 346 GK15483-PA 140..241 411..513 211 43.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:17:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26032-PA 722 GE26032-PA 1..722 1..719 3344 94.7 Plus
Dyak\GE17515-PA 1252 GE17515-PA 641..772 373..503 278 43 Plus
Dyak\GE18262-PA 324 GE18262-PA 115..226 405..517 216 41.2 Plus
Dyak\GE22970-PA 507 GE22970-PA 70..155 411..498 213 42 Plus
Dyak\GE14501-PA 599 GE14501-PA 100..224 379..507 208 40.6 Plus

LD24749.hyp Sequence

Translation from 325 to 2484

> LD24749.hyp
MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANV
VGSSSSDLTSSLDQTLEAISAINNNQSNGNSSQSASYNANANFLTSSGLH
ASPTAKWMGSSANFWSNSDYYADLGACVNPISVMPLINSTSAGMFSPKKN
KTASSTQGRSGAVPSSPSAERDQHKSHLTFSPAQMKVSAGSMRRDQVMAH
IPKQISVVTGTGTTAPATMATNSVLQRRNSSAVDAVRKDLVTELRKAQSS
PVPNSLEELGKGKGSTLLNASVGATNTIKLAPGIGGLTFANSAAYQKLKQ
TSLVKSPGGISPGAGSNMGLKREDSNKRGLQASTTPKSIASAANSPHHQM
QSNYSLGSPSSLSSSSASSPLGNVSNLVNIANNNTSGAGSGLVKPLQQKV
KLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFEN
APSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMDEE
VQKWSRKDPAAIRGAMVYPQHLESLERGEMKHGSADSDVELDSQSEIEES
SDLEEHEFEDTMVDAMLVEEEDEEEDGDDDEQIINDFDAEDERHANGNQA
NNLPINHPLLGQKSNDFDIEVGDLYDAIDIEDDKESVRRIISNDQHIIEL
NPADLNATDGYNQQPALKRARVDINYAIGPAGELEQQYGQKVKVQQVIQP
QQHPPTYNRRKMPLVNRVI*

LD24749.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
jumu-PA 719 CG4029-PA 1..719 1..719 3691 100 Plus
CHES-1-like-PC 1267 CG12690-PC 338..779 50..493 310 28 Plus
CHES-1-like-PD 1268 CG12690-PD 338..779 50..493 310 28 Plus
CHES-1-like-PB 1268 CG12690-PB 338..779 50..493 310 28 Plus
CHES-1-like-PA 1268 CG12690-PA 338..779 50..493 310 28 Plus