Clone LD24835 Report

Search the DGRC for LD24835

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:248
Well:35
Vector:pOT2
Associated Gene/TranscriptRhoBTB-RA
Protein status:LD24835.pep: gold
Preliminary Size:2200
Sequenced Size:3242

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5701 2001-01-01 Release 2 assignment
CG5701 2001-07-04 Blastp of sequenced clone
CG5701 2003-01-01 Sim4 clustering to Release 3
RhoBTB 2008-04-29 Release 5.5 accounting
RhoBTB 2008-08-15 Release 5.9 accounting
RhoBTB 2008-12-18 5.12 accounting

Clone Sequence Records

LD24835.complete Sequence

3242 bp (3242 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051710

> LD24835.complete
CGCGTAGAAGAATTGCGGGCTGTAACTGCAATTTATTATTTTTTAATTTC
ATTTATAGTGCACCTGGTCAGCGAGCACTGGCTCATCCGCAGCCATCCGT
CGGCAACCAGCTCGCAGCGATGTTAAACTTGTGCCAGCCGTAAAGATTTC
GCGTGTTTGCGAACCACAAACTGCGTCGCCATCGGTGTGTGGGTGCAGAA
ATAAATGCAAATTGTTGTAAAATGCCGTGCTTTGGTGTGCGTGTTGATAA
GTGCAATACGCAAAAGTAAGAACATTGAGGCAAATCCGTGCAATTCGTGC
AATCCGTGGGATCAGGCGTTTTCAGAGATTCCATAAGCTGGTTCTGCTAT
TTGTGCATGCCCAAAATGGACAACGAGCAGCCGCATCAAGAGCTAGTGAA
GTGCGTCCTGGTGGGGGACACGGCCGTGGGCAAGACGCGACTGATCTGCG
CGAGGGCCTGCAACAAACACGTCTCGCTATCTCAGCTCCTCTCTACGCAC
GTGCCGACCGTGTGGGCCATTGACCAGTATCGCATATATAAGGATGTACT
CGAGCGATCATGGGAGGTGGTCGATGGAGTGAATGTCTCACTTCGCCTAT
GGGACACATTTGGTGACCACGACAAGGATCGGCGCTTCGCATACGGCAGA
TCCGATGTGGTGCTGCTGTGCTTTTCCATTGCCAGTCCGATTTCCCTGCG
CAACTGCAAGATGATGTGGTATCCGGAAATTCGCCGCTTTTGTCCGGATG
TTCCCGTCATTCTAGTTGGCTGCAAGAACGACCTGCGCTACATGTATCGC
GACGAGAACTATCTCTCGTATTTCGGCGAGAAGGGAACCTTTGTTCGAGC
CGCGTTGAAGAGTGACCTGGTTATGCCGGATGAGGCGCGTGCCGTCGCCA
AAGAGCTAGGAGTGGCGTACTACGAGACCAGTGTTTTCACATACTTTGGG
GTGAACGAGGTGTTTGAAAACGCCATCCGATCCGCGTTGATTGCACGCCG
ACAGCAGCGCTTCTGGATGACAAACCTGAAGAAGGTGCAGAAGCCCCTGC
TGCAGGCGCCGTTCCGGCCACCGAAGCCACCACCACCGGAGGTCACCGTC
ATGGTCGGCAACTATCGGCAGGACATCTACAACATGTTCCTGTCGCAGGC
CTACACCGACCTCGTCCTGGTCGGGGCGGGTGGCACCAAGTTCGCCGTGC
ACAGGTTCATGCTAGCCGCCGCGTCCAGCATCTTCCAGCGCCTGCTTAGC
ACTGAGCTGACTGATATGGGCGGGCGGAGCAGCAGCGAATCTAGCATGGT
CAGCTCAACATTCGGGGAGGCCACCATTGCGGACTTTAACGATGACACGG
AGGCCCTGATCCGCTACGAATCACGCACACAACGAATGTGGGAACACTTG
AAGCGCCGCTCCAGCTACCAGGCGTTGCCTCTCATGGAGTCTAAGCGGTC
CAACGATTTGTACAGGGAGCTGCATCATCCGGTCCTGCAGAGCATTCGCC
TGGTGCACGTGGAAAACCATCGGGGTGTAAATGGTCTGCAGACGATTGTC
ACCCTTAGCAAACTTATCTCTCCGCAAGCTCTGCACCAGTGCCTGAGATT
TATTTATACCGGTACCATTGACAAGGATTGCGATAATATCGAGGAAATTC
GAGAAGCTGCCGATCTATTAGAACTGCCGCAACTGACTCAGCTACTTTCC
AGGCCTCAAACCGTTATGGAGAACTCCAGCGATGAGCCAAATCCGCACAT
TTGCCTGCGCATCAAAGAAAGCATGGAACGGCATTGCATTGGTGACGGGT
GCTTCAGTGATGTCACCTTTGAATTGGACGATGGCTTAATGAAGGCACAC
CGCGCTGTGTTGGTTGGTCGTTGTGATGTCATGCGCGCAATGTTGTTAGG
CGACTTTCGCGAGGCTCATTCCAATGTGATCGTATTCCCTGGCGTTACCA
TTTACACATTCCACAAGCTGCTGTGCTATTTGTACACAGACCAGATTCCG
CCAATCTCGGCCGTCAAGTGCCTCAATCTGCTGGAGCTGGCCAATAGACT
CTGCCTGCCGCGGCTGCTCAACCTGGTTGAATGCCGCGTTATTGAAGATC
TCACTCTGATTTCTCAGAACGAAACCAATGAAACGGTGGATCACTGTCTA
AAGCTGCTCGAGCCAGTGAAGCTGCACAACGCACATCAATTGGCCGAGTG
GTGCATGTCATACCTGTGCGTCAATTACAACCTTATTTGTAAGTTTTCAC
TCAAGGGCCTAAAGGCGCTACACCAGGATAATCAGGAGTACTTGCGCGAG
CACCGATGGCCTCCAGTCTGGTATCTGAAAGACTATGATTACTATCAGCG
ATGCCTGAACGAGCTGAACAAGGAGCTTAAGCTAAAGACTTCGAGGCGGG
AATCGCCTAGCGATGACGAGGGCTGTCTGTGCTTTACGGGCGTATTCTCT
TGCTGGCTGTTAGGTAAATCGAAGCGAAGCGCTGATGTGAGTGGAACCAC
GGATAACAGCAACGCAGATAATCAGATCTTCAACAGCGCCGGCAACTCGC
TCAACCACATTGATCTGGAGGCGGACATGGACCTGAATCTCTGACACCCA
GCCCTAGGGCAAGGAAGATCACTGCGCTTCATTGTGATCCTGCCGGTCCT
GATCTGTTTTATCTGTACGATTTTAAGTATTTTGATACTTTTCCAAATCC
ATACATAACAAACCTCAAGGGCACGATTTAGAGTGGTCGGGGAGATAAGG
GTTGGAAATGGAGGGGGCGTGGCGCGTCTGCTTTTGACATTACGCAATAT
ATAGAGCGCAAATTTGCCTTAGTGATTAACGATTAATAAGTCCAACGTAG
CTCGACCCAGAACAAGGGAGCATACTGCAGAGTGCTTCGGATTTCTTATA
TTTATACGCCTATATAAAACGCAAAGCATAGACGAGTATGTATGCACATG
CACCTCGGCGCTGCGAAGCATTTCGCTGTATTGCCTTACGATATATCGGT
GTACACTCAACTTGTTCTGCACGATCCCTCCCATGGAATGTGGACAGCCG
AAGGACGCAGACATGTGTATATCCATATATTTGTACCTTTACCTAAGACA
TGTATGTATGTATATTTTTGAATTCCTACTTACGGAAACATTTGTCTAGC
CATAGCTCTAAGCAATTCTCTACGATAAGGACGCATTTTGTACAGAATGA
TAGAATAAAAAAGCAATTACGAACAAAAAAAAAAAAAAAAAA

LD24835.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
RhoBTB-RA 3420 RhoBTB-RA 195..3420 1..3226 16130 100 Plus
RhoBTB.b 3411 RhoBTB.b 64..2505 1..2442 12210 100 Plus
RhoBTB.a 3327 RhoBTB.a 123..2564 1..2442 12210 100 Plus
RhoBTB.b 3411 RhoBTB.b 2628..3411 2443..3226 3920 100 Plus
RhoBTB.a 3327 RhoBTB.a 2564..3327 2463..3226 3820 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20370849..20371457 2616..3224 3045 100 Plus
chr3L 24539361 chr3L 20368370..20368907 847..1384 2690 100 Plus
chr3L 24539361 chr3L 20365334..20365660 1..327 1635 100 Plus
chr3L 24539361 chr3L 20370079..20370351 2170..2442 1365 100 Plus
chr3L 24539361 chr3L 20368969..20369229 1384..1644 1305 100 Plus
chr3L 24539361 chr3L 20369773..20370023 1928..2178 1225 99.2 Plus
chr3L 24539361 chr3L 20367488..20367709 326..547 1110 100 Plus
chr3L 24539361 chr3L 20367938..20368138 647..847 1005 100 Plus
chr3L 24539361 chr3L 20370605..20370780 2442..2617 880 100 Plus
chr3L 24539361 chr3L 20369292..20369407 1642..1757 580 100 Plus
chr3L 24539361 chr3L 20367771..20367874 546..649 520 100 Plus
chr3L 24539361 chr3L 20369471..20369563 1757..1849 450 98.9 Plus
chr3L 24539361 chr3L 20369627..20369712 1843..1928 430 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:16:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20381790..20382401 2616..3227 3060 100 Plus
3L 28110227 3L 20379311..20379848 847..1384 2690 100 Plus
3L 28110227 3L 20376275..20376601 1..327 1635 100 Plus
3L 28110227 3L 20381020..20381292 2170..2442 1365 100 Plus
3L 28110227 3L 20379910..20380170 1384..1644 1305 100 Plus
3L 28110227 3L 20380714..20380964 1928..2178 1225 99.2 Plus
3L 28110227 3L 20378429..20378650 326..547 1110 100 Plus
3L 28110227 3L 20378879..20379079 647..847 1005 100 Plus
3L 28110227 3L 20381546..20381721 2442..2617 880 100 Plus
3L 28110227 3L 20380233..20380348 1642..1757 580 100 Plus
3L 28110227 3L 20378712..20378815 546..649 520 100 Plus
3L 28110227 3L 20380412..20380504 1757..1849 450 98.9 Plus
3L 28110227 3L 20380568..20380653 1843..1928 430 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:54:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20374890..20375501 2616..3227 3060 100 Plus
3L 28103327 3L 20372411..20372948 847..1384 2690 100 Plus
3L 28103327 3L 20369375..20369701 1..327 1635 100 Plus
3L 28103327 3L 20374120..20374392 2170..2442 1365 100 Plus
3L 28103327 3L 20373010..20373270 1384..1644 1305 100 Plus
3L 28103327 3L 20373814..20374064 1928..2178 1225 99.2 Plus
3L 28103327 3L 20371529..20371750 326..547 1110 100 Plus
3L 28103327 3L 20371979..20372179 647..847 1005 100 Plus
3L 28103327 3L 20374646..20374821 2442..2617 880 100 Plus
3L 28103327 3L 20373333..20373448 1642..1757 580 100 Plus
3L 28103327 3L 20371812..20371915 546..649 520 100 Plus
3L 28103327 3L 20373512..20373604 1757..1849 450 98.9 Plus
3L 28103327 3L 20373668..20373753 1843..1928 430 100 Plus
Blast to na_te.dros performed on 2019-03-16 00:50:37 has no hits.

LD24835.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:51:27 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20369774..20370016 1929..2171 100 -> Plus
chr3L 20365334..20365660 1..327 91 -> Plus
chr3L 20367490..20367707 328..545 100 -> Plus
chr3L 20367771..20367874 546..649 100 -> Plus
chr3L 20367941..20368138 650..847 100 -> Plus
chr3L 20368371..20368907 848..1384 100 -> Plus
chr3L 20368970..20369228 1385..1643 100 -> Plus
chr3L 20369294..20369407 1644..1757 100 -> Plus
chr3L 20369472..20369558 1758..1844 100 -> Plus
chr3L 20369629..20369712 1845..1928 100 -> Plus
chr3L 20370081..20370351 2172..2442 100 -> Plus
chr3L 20370606..20370780 2443..2617 100 -> Plus
chr3L 20370851..20371457 2618..3224 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:03:33 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RA 1..2238 357..2594 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:21:40 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RA 1..2238 357..2594 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:58:57 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RB 1..2352 357..2708 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:54:16 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RA 1..2238 357..2594 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:15:16 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RB 1..2352 357..2708 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:18:35 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RA 64..3287 1..3224 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:21:39 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RA 64..3287 1..3224 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:58:57 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RA 34..3257 1..3224 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:54:16 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RA 64..3287 1..3224 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:15:16 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
RhoBTB-RA 34..3257 1..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:27 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20378712..20378815 546..649 100 -> Plus
3L 20378882..20379079 650..847 100 -> Plus
3L 20376275..20376601 1..327 100 -> Plus
3L 20378431..20378648 328..545 100 -> Plus
3L 20379312..20379848 848..1384 100 -> Plus
3L 20379911..20380169 1385..1643 100 -> Plus
3L 20380235..20380348 1644..1757 100 -> Plus
3L 20380413..20380499 1758..1844 100 -> Plus
3L 20380570..20380653 1845..1928 100 -> Plus
3L 20380715..20380957 1929..2171 100 -> Plus
3L 20381022..20381292 2172..2442 100 -> Plus
3L 20381547..20381721 2443..2617 100 -> Plus
3L 20381792..20382398 2618..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:27 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20378712..20378815 546..649 100 -> Plus
3L 20378882..20379079 650..847 100 -> Plus
3L 20376275..20376601 1..327 100 -> Plus
3L 20378431..20378648 328..545 100 -> Plus
3L 20379312..20379848 848..1384 100 -> Plus
3L 20379911..20380169 1385..1643 100 -> Plus
3L 20380235..20380348 1644..1757 100 -> Plus
3L 20380413..20380499 1758..1844 100 -> Plus
3L 20380570..20380653 1845..1928 100 -> Plus
3L 20380715..20380957 1929..2171 100 -> Plus
3L 20381022..20381292 2172..2442 100 -> Plus
3L 20381547..20381721 2443..2617 100 -> Plus
3L 20381792..20382398 2618..3224 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:27 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20378712..20378815 546..649 100 -> Plus
3L 20378882..20379079 650..847 100 -> Plus
3L 20376275..20376601 1..327 100 -> Plus
3L 20378431..20378648 328..545 100 -> Plus
3L 20379312..20379848 848..1384 100 -> Plus
3L 20379911..20380169 1385..1643 100 -> Plus
3L 20380235..20380348 1644..1757 100 -> Plus
3L 20380413..20380499 1758..1844 100 -> Plus
3L 20380570..20380653 1845..1928 100 -> Plus
3L 20380715..20380957 1929..2171 100 -> Plus
3L 20381022..20381292 2172..2442 100 -> Plus
3L 20381547..20381721 2443..2617 100 -> Plus
3L 20381792..20382398 2618..3224 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:58:57 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20371531..20371748 328..545 100 -> Plus
arm_3L 20371812..20371915 546..649 100 -> Plus
arm_3L 20371982..20372179 650..847 100 -> Plus
arm_3L 20369375..20369701 1..327 100 -> Plus
arm_3L 20372412..20372948 848..1384 100 -> Plus
arm_3L 20373011..20373269 1385..1643 100 -> Plus
arm_3L 20373335..20373448 1644..1757 100 -> Plus
arm_3L 20373513..20373599 1758..1844 100 -> Plus
arm_3L 20373670..20373753 1845..1928 100 -> Plus
arm_3L 20373815..20374057 1929..2171 100 -> Plus
arm_3L 20374122..20374392 2172..2442 100 -> Plus
arm_3L 20374647..20374821 2443..2617 100 -> Plus
arm_3L 20374892..20375498 2618..3224 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:31:56 Download gff for LD24835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20373513..20373599 1758..1844 100 -> Plus
3L 20373670..20373753 1845..1928 100 -> Plus
3L 20371531..20371748 328..545 100 -> Plus
3L 20371812..20371915 546..649 100 -> Plus
3L 20371982..20372179 650..847 100 -> Plus
3L 20373011..20373269 1385..1643 100 -> Plus
3L 20373335..20373448 1644..1757 100 -> Plus
3L 20369375..20369701 1..327 100 -> Plus
3L 20372412..20372948 848..1384 100 -> Plus
3L 20373815..20374057 1929..2171 100 -> Plus
3L 20374122..20374392 2172..2442 100 -> Plus
3L 20374647..20374821 2443..2617 100 -> Plus
3L 20374892..20375498 2618..3224 100   Plus

LD24835.pep Sequence

Translation from 356 to 2593

> LD24835.pep
MPKMDNEQPHQELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVP
TVWAIDQYRIYKDVLERSWEVVDGVNVSLRLWDTFGDHDKDRRFAYGRSD
VVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKNDLRYMYRDE
NYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGVAYYETSVFTYFGVN
EVFENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPPPEVTVMV
GNYRQDIYNMFLSQAYTDLVLVGAGGTKFAVHRFMLAAASSIFQRLLSTE
LTDMGGRSSSESSMVSSTFGEATIADFNDDTEALIRYESRTQRMWEHLKR
RSSYQALPLMESKRSNDLYRELHHPVLQSIRLVHVENHRGVNGLQTIVTL
SKLISPQALHQCLRFIYTGTIDKDCDNIEEIREAADLLELPQLTQLLSRP
QTVMENSSDEPNPHICLRIKESMERHCIGDGCFSDVTFELDDGLMKAHRA
VLVGRCDVMRAMLLGDFREAHSNVIVFPGVTIYTFHKLLCYLYTDQIPPI
SAVKCLNLLELANRLCLPRLLNLVECRVIEDLTLISQNETNETVDHCLKL
LEPVKLHNAHQLAEWCMSYLCVNYNLICKFSLKGLKALHQDNQEYLREHR
WPPVWYLKDYDYYQRCLNELNKELKLKTSRRESPSDDEGCLCFTGVFSCW
LLGKSKRSADVSGTTDNSNADNQIFNSAGNSLNHIDLEADMDLNL*

LD24835.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:46:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10335-PA 734 GF10335-PA 1..734 4..745 3686 94.7 Plus
Dana\GF11290-PA 192 GF11290-PA 7..186 15..218 316 39.6 Plus
Dana\GF10067-PA 192 GF10067-PA 2..184 12..218 299 37.1 Plus
Dana\GF16294-PA 195 GF16294-PA 7..191 14..218 297 37.7 Plus
Dana\GF23788-PA 192 GF23788-PA 2..186 12..218 288 36.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:46:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16109-PA 735 GG16109-PA 1..735 4..745 3930 98.1 Plus
Dere\GG20566-PA 192 GG20566-PA 7..186 15..218 316 39.6 Plus
Dere\GG11563-PA 195 GG11563-PA 7..191 14..218 300 37.7 Plus
Dere\GG14611-PA 192 GG14611-PA 2..184 12..218 299 37.1 Plus
Dere\GG14963-PA 192 GG14963-PA 2..186 12..218 288 36.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16972-PA 746 GH16972-PA 1..746 4..745 3555 90.9 Plus
Dgri\GH22067-PA 192 GH22067-PA 7..186 15..218 321 40.1 Plus
Dgri\GH19274-PA 195 GH19274-PA 7..191 14..218 304 37.7 Plus
Dgri\GH16006-PA 192 GH16006-PA 2..184 12..218 300 37.1 Plus
Dgri\GH16613-PA 192 GH16613-PA 2..177 12..211 278 36.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
RhoBTB-PB 783 CG5701-PB 1..745 1..745 3941 100 Plus
RhoBTB-PA 745 CG5701-PA 1..745 1..745 3941 100 Plus
RhoBTB-PC 738 CG5701-PC 1..738 1..745 3881 99.1 Plus
Rho1-PA 192 CG8416-PA 7..186 15..218 304 39.6 Plus
Rho1-PG 192 CG8416-PG 7..186 15..218 304 39.6 Plus
Rho1-PF 192 CG8416-PF 7..186 15..218 304 39.6 Plus
Rho1-PD 192 CG8416-PD 7..186 15..218 304 39.6 Plus
Rho1-PC 192 CG8416-PC 7..186 15..218 304 39.6 Plus
Rho1-PB 192 CG8416-PB 7..186 15..218 304 39.6 Plus
Rac1-PB 192 CG2248-PB 2..177 12..211 293 37.9 Plus
Rac1-PA 192 CG2248-PA 2..177 12..211 293 37.9 Plus
Mtl-PC 195 CG5588-PC 7..191 14..218 289 37.4 Plus
Mtl-PA 195 CG5588-PA 7..191 14..218 289 37.4 Plus
Mtl-PB 195 CG5588-PB 7..191 14..218 289 37.4 Plus
Rac2-PB 192 CG8556-PB 2..177 12..211 282 36.9 Plus
Rac2-PA 192 CG8556-PA 2..177 12..211 282 36.9 Plus
Cdc42-PD 191 CG12530-PD 2..177 12..211 255 37.3 Plus
Cdc42-PC 191 CG12530-PC 2..177 12..211 255 37.3 Plus
Cdc42-PA 191 CG12530-PA 2..177 12..211 255 37.3 Plus
RhoL-PA 190 CG9366-PA 12..143 14..159 189 34.5 Plus
RhoL-PB 214 CG9366-PB 36..167 14..159 189 34.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11838-PA 745 GI11838-PA 1..745 1..745 3533 89.8 Plus
Dmoj\GI19151-PA 192 GI19151-PA 7..186 15..218 321 40.1 Plus
Dmoj\GI22015-PA 195 GI22015-PA 7..191 14..218 304 37.7 Plus
Dmoj\GI12273-PA 192 GI12273-PA 2..184 12..218 299 37.1 Plus
Dmoj\GI12458-PA 192 GI12458-PA 2..177 12..211 280 36.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11881-PA 742 GL11881-PA 1..742 4..745 3623 93.3 Plus
Dper\GL20555-PA 192 GL20555-PA 7..186 15..218 320 40.1 Plus
Dper\GL13704-PA 195 GL13704-PA 7..191 14..218 306 37.7 Plus
Dper\GL24253-PA 192 GL24253-PA 2..186 12..218 302 38.1 Plus
Dper\GL18265-PA 191 GL18265-PA 2..177 12..211 256 36.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19068-PA 742 GA19068-PA 1..742 4..745 3627 93.5 Plus
Dpse\GA25121-PA 192 GA25121-PA 7..186 15..218 320 40.1 Plus
Dpse\GA18989-PA 195 GA18989-PA 7..191 14..218 306 37.7 Plus
Dpse\GA23612-PA 192 GA23612-PA 2..186 12..218 302 38.1 Plus
Dpse\GA15321-PA 192 GA15321-PA 2..184 12..218 299 37.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:46:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22285-PA 735 GM22285-PA 1..735 4..745 3937 98.5 Plus
Dsec\GM21657-PA 192 GM21657-PA 7..186 15..218 316 39.6 Plus
Dsec\GM16346-PA 195 GM16346-PA 7..191 14..218 300 37.7 Plus
Dsec\GM11478-PA 195 GM11478-PA 7..191 14..218 300 37.7 Plus
Dsec\GM14225-PA 192 GM14225-PA 2..184 12..218 299 37.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14882-PA 735 GD14882-PA 1..735 4..745 3933 98.4 Plus
Dsim\GD11158-PA 192 GD11158-PA 7..186 15..218 316 39.6 Plus
Dsim\GD13487-PA 192 GD13487-PA 2..184 12..218 299 37.1 Plus
Dsim\GD13056-PA 192 GD13056-PA 2..186 12..218 288 36.3 Plus
Dsim\GD21343-PA 184 GD21343-PA 7..169 14..200 259 37.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13537-PA 739 GJ13537-PA 1..739 4..745 3557 90.9 Plus
Dvir\GJ22286-PA 192 GJ22286-PA 7..186 15..218 321 40.1 Plus
Dvir\GJ10465-PA 195 GJ10465-PA 7..191 14..218 305 37.7 Plus
Dvir\GJ13209-PA 192 GJ13209-PA 2..184 12..218 299 37.1 Plus
Dvir\GJ12360-PA 192 GJ12360-PA 2..177 12..211 280 36.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:46:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16960-PA 751 GK16960-PA 1..751 4..745 3665 93.1 Plus
Dwil\GK23137-PA 192 GK23137-PA 7..186 15..218 316 39.6 Plus
Dwil\GK11760-PA 195 GK11760-PA 7..191 14..218 302 37.3 Plus
Dwil\GK20502-PA 192 GK20502-PA 2..184 12..218 300 37.1 Plus
Dwil\GK16805-PA 192 GK16805-PA 2..177 12..211 290 36.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19673-PA 751 GE19673-PA 14..751 1..745 3928 97.7 Plus
Dyak\GE11751-PA 192 GE11751-PA 7..186 15..218 316 39.6 Plus
Dyak\GE23748-PA 195 GE23748-PA 7..191 14..218 300 37.7 Plus
Dyak\GE20972-PA 192 GE20972-PA 2..184 12..218 299 37.1 Plus
Dyak\GE20412-PA 192 GE20412-PA 2..186 12..218 288 36.3 Plus

LD24835.hyp Sequence

Translation from 356 to 2593

> LD24835.hyp
MPKMDNEQPHQELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVP
TVWAIDQYRIYKDVLERSWEVVDGVNVSLRLWDTFGDHDKDRRFAYGRSD
VVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKNDLRYMYRDE
NYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGVAYYETSVFTYFGVN
EVFENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPPPEVTVMV
GNYRQDIYNMFLSQAYTDLVLVGAGGTKFAVHRFMLAAASSIFQRLLSTE
LTDMGGRSSSESSMVSSTFGEATIADFNDDTEALIRYESRTQRMWEHLKR
RSSYQALPLMESKRSNDLYRELHHPVLQSIRLVHVENHRGVNGLQTIVTL
SKLISPQALHQCLRFIYTGTIDKDCDNIEEIREAADLLELPQLTQLLSRP
QTVMENSSDEPNPHICLRIKESMERHCIGDGCFSDVTFELDDGLMKAHRA
VLVGRCDVMRAMLLGDFREAHSNVIVFPGVTIYTFHKLLCYLYTDQIPPI
SAVKCLNLLELANRLCLPRLLNLVECRVIEDLTLISQNETNETVDHCLKL
LEPVKLHNAHQLAEWCMSYLCVNYNLICKFSLKGLKALHQDNQEYLREHR
WPPVWYLKDYDYYQRCLNELNKELKLKTSRRESPSDDEGCLCFTGVFSCW
LLGKSKRSADVSGTTDNSNADNQIFNSAGNSLNHIDLEADMDLNL*

LD24835.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:35:24
Subject Length Description Subject Range Query Range Score Percent Strand
RhoBTB-PB 783 CG5701-PB 1..745 1..745 3941 100 Plus
RhoBTB-PA 745 CG5701-PA 1..745 1..745 3941 100 Plus
RhoBTB-PC 738 CG5701-PC 1..738 1..745 3881 99.1 Plus
Rho1-PA 192 CG8416-PA 7..186 15..218 304 39.6 Plus
Rho1-PG 192 CG8416-PG 7..186 15..218 304 39.6 Plus