BDGP Sequence Production Resources |
Search the DGRC for LD24837
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 248 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | RIOK1-RA |
Protein status: | LD24837.pep: gold |
Preliminary Size: | 2257 |
Sequenced Size: | 2254 |
Gene | Date | Evidence |
---|---|---|
CG11660 | 2001-01-01 | Release 2 assignment |
CG11660 | 2001-07-04 | Blastp of sequenced clone |
CG11660 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11660 | 2008-04-29 | Release 5.5 accounting |
CG11660 | 2008-08-15 | Release 5.9 accounting |
CG11660 | 2008-12-18 | 5.12 accounting |
2254 bp (2254 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051711
> LD24837.complete AGCTGTTAAGCTAGCTGATTGCCAAAGCCAACAATTGAATTTCTTTAAAT TTTATTTCAGTTGCAACAAATTAAGATACAAATAATAGTTTTCGCACGAT ATTAAGCCCGTTTGGCAAGACAAAATCGCTTTAATATTTATCCGCACATT TGCTTACTGCATATAGCCATCTTAGGAAAATACCAAAACAATGTCGACGC TTCTTTGTGAATGGCATTCGCAACACGTGCGATTGGTTGTACAAATTTGT GAAATTTTGAGCTTTAATAGTAGTTACTGCGCATCTCGCGATGAACAACG ACAGCCACAAATATAGCGACGCCGAGGAGGACGAAGAAGACCTGCGAAGT TCCGAGTGGACAAACGACTTCAAGAACCTCACATTGAAGCACGAGATCTT TAAGGATATTAAACTGACACCCAAAGAGGACTGTGATGACCTGGCACAAG TTATAGCAACCGCCAACGAAGAGGATGAACCGGAGGACGAAGAGCCAGAG GAATACGATGAAGACGATTACGACGATATCGGAGATGACTATGATACGTA TGAGGAGGCCTATACGGGCTTTAACAAGCTTCACGTTCAGCCGCAGCTAA CAAATGCCAGTGGAGGTGGCTCCGGCGGTGGCGCTGGAGGTGCATCTGGT GGCTCACAACGCGTCAGCAGCTACCAACCAAACGAAAAGCTGTTGCGCCG CTACTCCGCCCGCATTAATGTAGAAAAGTACGATCCCACCACAAATATGA GCGCGCAGGCGGCCAACCGGCTGGTGAACTTCGATCGGCGCGATAGGACA CAGGTGCGTGACAAACACGACCGAGCCACTGCGGAACAGGTAATGGATCC ACGTACCCGGATGATACTCTTCAAGCTGCTGAATCGCGGAATGATACAGG AAATCAACGGCTGCATTTCTACGGGCAAAGAGGCTAATGTCTATCACGCC GTTTCCAAAAATGGTGAAGAGGAGTTTGCCATCAAGATCTACAAGACGTC CATTCTAGTATTTAAGGACCGCGACAAATATGTGTCAGGCGAATTCCGGT TTCGACACGGCTACTGCAAGCACAATCCGCGCAAAATGGTGCGTACCTGG GCGGAGAAGGAAATGCGAAACTACTTGCGAATGCGCAACGCTGGCGTTCC TGTACCGGAGCCAATCCTGCTACGCTCACATGTACTGGTCATGCGGTTTT GCGGTCGCGACGGATGGCCTGCGCCAAAGCTTAAGGATGTTGAGCTCAGC ACTTCAAAGGCGCGAGAGTTGTACAGGGATTGCGTAGTCATCATGTGGCG CATTTACAATCAATGCCGTCTTGTGCACGCTGATCTTTCAGAGTTTAACA TCCTGCTGCAGGATGGTCAGCTGGTCATTATCGATGTAAGCCAGTCAGTG GAGCACGATCATCCGCATTCCTTTGACTTCCTGCGCAAGGATTGCACCAA CATATCCGAGTTCTTCCGAAAACGTGCGGTGGCAACGATGACGGTGAAGG AACTTTTTGATTTCATCACCGATCAGACTATAACCACAGAGAACATGGAG GAGTGCCTGGAACGCATATCTGAGCGAATCAAGGACCGCGATTTCGATGC CATCTCGGCTCAGGAGAAGATCGATGAGGCTGTTTGGCAGAACACCTACA TTCCCAAAAGGTTGGACGAGGTGCGCCATTTTGAGAGAGATGTAGCCAAG GCCAAGCAAGGGGTGCAGCAAAATCTCATCTACGGAAAGATCACTGGTCT GACTTCGGATCTGGACGTGCAGCAAAAGCCAGACGTGCTGCAATCCTCGA CCGCCAAAGAGGATGACGGTAGTGAGGCCCAAACGAGCGGCAGTGAGGAC GAAGACAACTCGCAGGATAACGACAACGATGAAGATGCCAAGAAGTTTAA GAATTCGGCAAGACCACGAGAAGAGTCTCCGGAGAGTAAAAAGGCTCGCA AAAAGGCCGTCAAAGATGCGAAAGCCGAGCAGCGCAAGGTTAAAGTGAAA AAGCACGTGAAGAAACGCAAAGAGAAAATGGGCAGCATGAAAAAATAGGA TTGTTTCTGAATAGAGTTAATATAGCTGTGAGTTTAAGTTCTAAATATTT TATGCAAGTTTTGTAACTTGGCTCCATCGTATATAATGAAATTATATAAA AACGATGTAGCTAATCATTTTCTTATGGTATTACTATACCAAATGGCTGC GGGGAACGCCGCAGCTATAAATGAAATATTAAACACAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11637774..11639095 | 1672..351 | 6280 | 98.3 | Minus |
chr3L | 24539361 | chr3L | 11637151..11637716 | 2234..1669 | 2770 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 11639307..11639576 | 270..1 | 1350 | 100 | Minus |
chr3L | 24539361 | chr3L | 11639155..11639241 | 350..264 | 420 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11646859..11648180 | 1672..351 | 6595 | 99.9 | Minus |
3L | 28110227 | 3L | 11646233..11646801 | 2237..1669 | 2845 | 100 | Minus |
3L | 28110227 | 3L | 11648392..11648661 | 270..1 | 1350 | 100 | Minus |
3L | 28110227 | 3L | 11648240..11648326 | 350..264 | 420 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11639959..11641280 | 1672..351 | 6595 | 99.9 | Minus |
3L | 28103327 | 3L | 11639333..11639901 | 2237..1669 | 2845 | 100 | Minus |
3L | 28103327 | 3L | 11641492..11641761 | 270..1 | 1350 | 100 | Minus |
3L | 28103327 | 3L | 11641340..11641426 | 350..264 | 420 | 98.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11637149..11637714 | 1671..2236 | 99 | <- | Minus |
chr3L | 11637776..11639095 | 351..1670 | 98 | <- | Minus |
chr3L | 11639155..11639234 | 271..350 | 100 | <- | Minus |
chr3L | 11639307..11639576 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11660-RB | 1..1758 | 291..2048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11660-RB | 1..1758 | 291..2048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11660-RA | 1..1758 | 291..2048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11660-RB | 1..1758 | 291..2048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RIOK1-RA | 1..1758 | 291..2048 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11660-RA | 1..2236 | 1..2236 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11660-RA | 1..2236 | 1..2236 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11660-RA | 1..2049 | 188..2236 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11660-RA | 1..2236 | 1..2236 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RIOK1-RA | 1..2049 | 188..2236 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11646234..11646799 | 1671..2236 | 100 | <- | Minus |
3L | 11646861..11648180 | 351..1670 | 99 | <- | Minus |
3L | 11648240..11648319 | 271..350 | 100 | <- | Minus |
3L | 11648392..11648661 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11646234..11646799 | 1671..2236 | 100 | <- | Minus |
3L | 11646861..11648180 | 351..1670 | 99 | <- | Minus |
3L | 11648240..11648319 | 271..350 | 100 | <- | Minus |
3L | 11648392..11648661 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11646234..11646799 | 1671..2236 | 100 | <- | Minus |
3L | 11646861..11648180 | 351..1670 | 99 | <- | Minus |
3L | 11648240..11648319 | 271..350 | 100 | <- | Minus |
3L | 11648392..11648661 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11639334..11639899 | 1671..2236 | 100 | <- | Minus |
arm_3L | 11639961..11641280 | 351..1670 | 99 | <- | Minus |
arm_3L | 11641340..11641419 | 271..350 | 100 | <- | Minus |
arm_3L | 11641492..11641761 | 1..270 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11639334..11639899 | 1671..2236 | 100 | <- | Minus |
3L | 11639961..11641280 | 351..1670 | 99 | <- | Minus |
3L | 11641340..11641419 | 271..350 | 100 | <- | Minus |
3L | 11641492..11641761 | 1..270 | 100 | Minus |
Translation from 290 to 2047
> LD24837.pep MNNDSHKYSDAEEDEEDLRSSEWTNDFKNLTLKHEIFKDIKLTPKEDCDD LAQVIATANEEDEPEDEEPEEYDEDDYDDIGDDYDTYEEAYTGFNKLHVQ PQLTNASGGGSGGGAGGASGGSQRVSSYQPNEKLLRRYSARINVEKYDPT TNMSAQAANRLVNFDRRDRTQVRDKHDRATAEQVMDPRTRMILFKLLNRG MIQEINGCISTGKEANVYHAVSKNGEEEFAIKIYKTSILVFKDRDKYVSG EFRFRHGYCKHNPRKMVRTWAEKEMRNYLRMRNAGVPVPEPILLRSHVLV MRFCGRDGWPAPKLKDVELSTSKARELYRDCVVIMWRIYNQCRLVHADLS EFNILLQDGQLVIIDVSQSVEHDHPHSFDFLRKDCTNISEFFRKRAVATM TVKELFDFITDQTITTENMEECLERISERIKDRDFDAISAQEKIDEAVWQ NTYIPKRLDEVRHFERDVAKAKQGVQQNLIYGKITGLTSDLDVQQKPDVL QSSTAKEDDGSEAQTSGSEDEDNSQDNDNDEDAKKFKNSARPREESPESK KARKKAVKDAKAEQRKVKVKKHVKKRKEKMGSMKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24528-PA | 583 | GF24528-PA | 1..582 | 1..584 | 2385 | 83.3 | Plus |
Dana\GF23540-PA | 612 | GF23540-PA | 239..533 | 153..429 | 549 | 42.1 | Plus |
Dana\GF17559-PA | 524 | GF17559-PA | 83..276 | 191..395 | 191 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13901-PA | 580 | GG13901-PA | 1..580 | 1..585 | 2706 | 94.7 | Plus |
Dere\GG25025-PA | 603 | GG25025-PA | 228..504 | 153..410 | 547 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16627-PA | 574 | GH16627-PA | 3..574 | 4..585 | 2379 | 79.8 | Plus |
Dgri\GH13229-PA | 599 | GH13229-PA | 235..529 | 153..429 | 569 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RIOK1-PB | 585 | CG11660-PB | 1..585 | 1..585 | 3063 | 100 | Plus |
RIOK1-PA | 585 | CG11660-PA | 1..585 | 1..585 | 3063 | 100 | Plus |
CG3008-PA | 603 | CG3008-PA | 148..602 | 66..538 | 575 | 31.9 | Plus |
RIOK2-PA | 538 | CG11859-PA | 83..276 | 191..395 | 166 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11584-PA | 578 | GI11584-PA | 3..578 | 4..585 | 2349 | 80.2 | Plus |
Dmoj\GI18109-PA | 619 | GI18109-PA | 246..540 | 153..429 | 558 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16346-PA | 556 | GL16346-PA | 1..556 | 1..585 | 2306 | 78.9 | Plus |
Dper\GL18640-PA | 618 | GL18640-PA | 246..600 | 153..525 | 511 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11126-PA | 573 | GA11126-PA | 1..573 | 1..585 | 2300 | 79 | Plus |
Dpse\GA15630-PA | 618 | GA15630-PA | 246..600 | 153..525 | 511 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24726-PA | 586 | GM24726-PA | 1..586 | 1..585 | 3092 | 98 | Plus |
Dsec\GM18498-PA | 603 | GM18498-PA | 228..504 | 153..410 | 543 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12787-PA | 585 | GD12787-PA | 1..585 | 1..585 | 3065 | 97.4 | Plus |
Dsim\GD23306-PA | 583 | GD23306-PA | 154..484 | 72..410 | 433 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11263-PA | 586 | GJ11263-PA | 3..586 | 4..585 | 2288 | 78.8 | Plus |
Dvir\GJ16296-PA | 615 | GJ16296-PA | 239..533 | 153..429 | 561 | 42.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10469-PA | 580 | GK10469-PA | 3..580 | 4..584 | 2198 | 76.7 | Plus |
Dwil\GK24469-PA | 589 | GK24469-PA | 156..530 | 66..429 | 617 | 36.4 | Plus |
Dwil\GK12926-PA | 545 | GK12926-PA | 83..276 | 191..395 | 187 | 25.7 | Plus |
Translation from 290 to 2047
> LD24837.hyp MNNDSHKYSDAEEDEEDLRSSEWTNDFKNLTLKHEIFKDIKLTPKEDCDD LAQVIATANEEDEPEDEEPEEYDEDDYDDIGDDYDTYEEAYTGFNKLHVQ PQLTNASGGGSGGGAGGASGGSQRVSSYQPNEKLLRRYSARINVEKYDPT TNMSAQAANRLVNFDRRDRTQVRDKHDRATAEQVMDPRTRMILFKLLNRG MIQEINGCISTGKEANVYHAVSKNGEEEFAIKIYKTSILVFKDRDKYVSG EFRFRHGYCKHNPRKMVRTWAEKEMRNYLRMRNAGVPVPEPILLRSHVLV MRFCGRDGWPAPKLKDVELSTSKARELYRDCVVIMWRIYNQCRLVHADLS EFNILLQDGQLVIIDVSQSVEHDHPHSFDFLRKDCTNISEFFRKRAVATM TVKELFDFITDQTITTENMEECLERISERIKDRDFDAISAQEKIDEAVWQ NTYIPKRLDEVRHFERDVAKAKQGVQQNLIYGKITGLTSDLDVQQKPDVL QSSTAKEDDGSEAQTSGSEDEDNSQDNDNDEDAKKFKNSARPREESPESK KARKKAVKDAKAEQRKVKVKKHVKKRKEKMGSMKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RIOK1-PB | 585 | CG11660-PB | 1..585 | 1..585 | 3063 | 100 | Plus |
RIOK1-PA | 585 | CG11660-PA | 1..585 | 1..585 | 3063 | 100 | Plus |
CG3008-PA | 603 | CG3008-PA | 148..602 | 66..538 | 575 | 31.9 | Plus |
RIOK2-PA | 538 | CG11859-PA | 83..276 | 191..395 | 166 | 24.3 | Plus |