BDGP Sequence Production Resources |
Search the DGRC for LD24842
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 248 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | fws-RA |
Protein status: | LD24842.pep: gold |
Sequenced Size: | 2451 |
Gene | Date | Evidence |
---|---|---|
CG6549 | 2002-12-10 | Blastp of sequenced clone |
CG6549 | 2003-01-01 | Sim4 clustering to Release 3 |
fws | 2008-04-29 | Release 5.5 accounting |
fws | 2008-08-15 | Release 5.9 accounting |
fws | 2008-12-18 | 5.12 accounting |
2451 bp (2451 high quality bases) assembled on 2002-12-10
GenBank Submission: BT003257
> LD24842.complete TAAAATTGCTGCAAGTAATGGAAATAAAAGTGTAATACCAGCTTATAATT CGTATTACCATAGATTAAAACCTTCTGCATCATGGTGACTGGAGACCCGG TAGCGACAAAGACCCCAAACGCAGCGGATTCGGATGATAATGACTTTACC GCATCCATGTCGCACCTGACCATTGGCCAGCAAATCCAGGAGCTGTCCAA GCAACTGCAGAACACGAAGGAGGAGCTGCACCAGCAGGTGCGCGACAAGC ACGGAGCTCTACTGCAGCAGGCCACCCACGCTGGGCGCTTCGATGCGGCT TTAAACGCGCTCGCCGAGGATGTGCAGCGGGTCAGGGAAACTGGGCACCG GCTGAAGAACCAGGTGGACACGCAGTACCAGCAGGTGGAGAACCAAACGC AAGTGCTAGGGCGTCTGCACGATGTCAGTCACCTACTCCGCTCGGCTGGA ACATTGCTGAGCCTCACGGCCAAACTAAAAGCGACCAAGGATGTCCTACG CCTGGCCGAAATCCACTTTGAGTTGGGCCAACTCATCGAAGATAAGGAGC TAAAGGACATTGATTTTATCCAGCAGGAGCGAGCTTATGTGATCAGCTCT GCTCAGAAGATAAGGAACCTCACGCAGATGCAGTTGGTCACTGGGCTCCA GGAGCGCAATGAAAACCAAGTGGTTAATGCCTTGAAGATCTTTATGAATT TCAATACGCTGGAAAAATCGCTGGATAACCTATTGGCCACCTTTATTGCC GACATGGAGCAATCTCTGAAAGAGTGCTTTGCTGGCAACGATATATCTGT GCTGAACAAGTCCCCGACGCACAATGTGAGCAAACCTGCTCCCTCGAGGG GACCAGGAAAAACTCCCCAGTTGACAACCACTCAAAACTTCCGTGCCAAG TTCTGGAAGTCTCTTCATTGGCTGCTCTATGATGAACTTTTTGAGACTTG CACGCAAATCAAGCTGCTGAAAACGGCTCTCGAGCAGATCAACCAGTTTG GCTATACATCAGAATCATCGGATCAGTGCATTCCGCAGCGTTTTTGGCAG CAGGTGCAGCAGCTCCTGCGAAAATCCTTTGACGAATGCCCCCAGCATGT TACGCAGACCCTTCAGGAGGGGCTCTCAAAGCTCCTGACCTCCGCTCGTG GCTTGGAGCAGCGTCTGCATGGCGAGTTTCAGTTTGACAACGAACTATTT GCTCCCCTGGAAGTGGGTTACGTTAGCAAGTGTGCTGCCAACTTTAAGGC ATGTCTGGCGGGAGTCGATTTGCCCGGCAACGAAACGGTGGACAACTTTA TTCGTGTGGCATCAACGGAGCTCAGTGCTGCTTTGATCGATTCCCGTCTC ACGAATGCCATAGCAAATGTATTTGCGGCCTGTGGAAAAGAGTTGTGCAC AAAACTAGAGGCTCAAATCAAGCTGGGAGCTGATTCCAAGCAGGTCGTGG ATCTGCCCAATCTGCAGCAGCAGCAAAACACCCAGCTGGCGAATGTTCTG TTCTACTATAAGGATTCAGTGCGTCGCATGCTCAGTGATCTTCATGTGCA CTTTGAAAAGACACCGGGAACAGCTAGGGAGATTATATCCCGATCCTTGG AACAGGCTGATTTACTGATCGGCACCATTCTACAGCAGATAATGGAGTCG ATTATCACGACCATTAGCATCATTGTATTGAGTATGCACAGGGAGCCGGG ATTGAATTCGGAGAGGATGTCTACCACAGGTCCGTCGATGTACATGAAGG AACTGCAGGAGTTCGTCAACCGATCCTGGTCGCATCACATCGCCCTGTTC GATGACAAGCAGATGACGAAAAAGTGCGGACACGAGTTGGCCAAACGTTG CATTGAGCTCTTCCTGCACAATGTGTGCATTCTGCGACCTTTAAGCTCCT GCGGAAGGCAGCGTTTGAAGCAAGACTGTCAACACATGGAACAGGCGTTG AAACCTCTTTGCCCAAATCTCGCCGAGCTGGGAAAGCCGTCGCGTCTGCT AAGAGCCATGTCCTTGCTGATCGTCCAAACGGCCGAGGAGCTGGTCAAGC AGACAATCGGCGAGGACTCTCTAGTGCCCAGTTACATAGTGCTGTTGCTG CTCTTCGGACACGCTGGAGCAGATCTGCAGTCGCCACACACGACGGCCAA CTGGTCCAATGAGCGGCTGATCGAATGGCTGGATGGGCACACGGCTGAAC GGGAGAAACTAGAGCTGATCTCGGGGGCACTGCAACGGTATCGGGACAAT GCCAGGCGAAAGAACATTCAGCAGTACGACGAAGTTTACCCCATGATGGT AGATTATTTTGAACAGGCCTTAAAGGCACTTCCATAAATGTCTAATGTAT TATGTATCTAGAACTATGTATGTATGTATGTAAGAGCACGAATATGTTTG GAATAAACATATGCATGGCATCCTTCTATTAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 17477778..17478851 | 1759..686 | 5370 | 100 | Minus |
chr2L | 23010047 | chr2L | 17478903..17479589 | 687..1 | 3435 | 100 | Minus |
chr2L | 23010047 | chr2L | 17477049..17477722 | 2430..1757 | 3370 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 17479171..17480244 | 1759..686 | 5370 | 100 | Minus |
2L | 23513712 | 2L | 17480296..17480982 | 687..1 | 3435 | 100 | Minus |
2L | 23513712 | 2L | 17478439..17479115 | 2433..1757 | 3385 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 17479171..17480244 | 1759..686 | 5370 | 100 | Minus |
2L | 23513712 | 2L | 17480296..17480982 | 687..1 | 3435 | 100 | Minus |
2L | 23513712 | 2L | 17478439..17479115 | 2433..1757 | 3385 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 17477049..17477720 | 1759..2430 | 100 | <- | Minus |
chr2L | 17477779..17478849 | 688..1758 | 100 | <- | Minus |
chr2L | 17478903..17479589 | 1..687 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RA | 1..2256 | 82..2337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RA | 1..2256 | 82..2337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RC | 1..2256 | 82..2337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RA | 1..2256 | 82..2337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RD | 1..2256 | 82..2337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RA | 31..2460 | 1..2430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RA | 31..2460 | 1..2430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RA | 48..2477 | 1..2430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RA | 31..2460 | 1..2430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fws-RA | 48..2477 | 1..2430 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17478442..17479113 | 1759..2430 | 100 | <- | Minus |
2L | 17479172..17480242 | 688..1758 | 100 | <- | Minus |
2L | 17480296..17480982 | 1..687 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17478442..17479113 | 1759..2430 | 100 | <- | Minus |
2L | 17479172..17480242 | 688..1758 | 100 | <- | Minus |
2L | 17480296..17480982 | 1..687 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17478442..17479113 | 1759..2430 | 100 | <- | Minus |
2L | 17479172..17480242 | 688..1758 | 100 | <- | Minus |
2L | 17480296..17480982 | 1..687 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 17478442..17479113 | 1759..2430 | 100 | <- | Minus |
arm_2L | 17479172..17480242 | 688..1758 | 100 | <- | Minus |
arm_2L | 17480296..17480982 | 1..687 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17478442..17479113 | 1759..2430 | 100 | <- | Minus |
2L | 17479172..17480242 | 688..1758 | 100 | <- | Minus |
2L | 17480296..17480982 | 1..687 | 100 | Minus |
Translation from 81 to 2336
> LD24842.hyp MVTGDPVATKTPNAADSDDNDFTASMSHLTIGQQIQELSKQLQNTKEELH QQVRDKHGALLQQATHAGRFDAALNALAEDVQRVRETGHRLKNQVDTQYQ QVENQTQVLGRLHDVSHLLRSAGTLLSLTAKLKATKDVLRLAEIHFELGQ LIEDKELKDIDFIQQERAYVISSAQKIRNLTQMQLVTGLQERNENQVVNA LKIFMNFNTLEKSLDNLLATFIADMEQSLKECFAGNDISVLNKSPTHNVS KPAPSRGPGKTPQLTTTQNFRAKFWKSLHWLLYDELFETCTQIKLLKTAL EQINQFGYTSESSDQCIPQRFWQQVQQLLRKSFDECPQHVTQTLQEGLSK LLTSARGLEQRLHGEFQFDNELFAPLEVGYVSKCAANFKACLAGVDLPGN ETVDNFIRVASTELSAALIDSRLTNAIANVFAACGKELCTKLEAQIKLGA DSKQVVDLPNLQQQQNTQLANVLFYYKDSVRRMLSDLHVHFEKTPGTARE IISRSLEQADLLIGTILQQIMESIITTISIIVLSMHREPGLNSERMSTTG PSMYMKELQEFVNRSWSHHIALFDDKQMTKKCGHELAKRCIELFLHNVCI LRPLSSCGRQRLKQDCQHMEQALKPLCPNLAELGKPSRLLRAMSLLIVQT AEELVKQTIGEDSLVPSYIVLLLLFGHAGADLQSPHTTANWSNERLIEWL DGHTAEREKLELISGALQRYRDNARRKNIQQYDEVYPMMVDYFEQALKAL P*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fws-PI | 751 | CG6549-PI | 1..751 | 1..751 | 3842 | 100 | Plus |
fws-PH | 751 | CG6549-PH | 1..751 | 1..751 | 3842 | 100 | Plus |
fws-PD | 751 | CG6549-PD | 1..751 | 1..751 | 3842 | 100 | Plus |
fws-PA | 751 | CG6549-PA | 1..751 | 1..751 | 3842 | 100 | Plus |
fws-PC | 751 | CG6549-PC | 1..751 | 1..751 | 3842 | 100 | Plus |
Translation from 81 to 2336
> LD24842.pep MVTGDPVATKTPNAADSDDNDFTASMSHLTIGQQIQELSKQLQNTKEELH QQVRDKHGALLQQATHAGRFDAALNALAEDVQRVRETGHRLKNQVDTQYQ QVENQTQVLGRLHDVSHLLRSAGTLLSLTAKLKATKDVLRLAEIHFELGQ LIEDKELKDIDFIQQERAYVISSAQKIRNLTQMQLVTGLQERNENQVVNA LKIFMNFNTLEKSLDNLLATFIADMEQSLKECFAGNDISVLNKSPTHNVS KPAPSRGPGKTPQLTTTQNFRAKFWKSLHWLLYDELFETCTQIKLLKTAL EQINQFGYTSESSDQCIPQRFWQQVQQLLRKSFDECPQHVTQTLQEGLSK LLTSARGLEQRLHGEFQFDNELFAPLEVGYVSKCAANFKACLAGVDLPGN ETVDNFIRVASTELSAALIDSRLTNAIANVFAACGKELCTKLEAQIKLGA DSKQVVDLPNLQQQQNTQLANVLFYYKDSVRRMLSDLHVHFEKTPGTARE IISRSLEQADLLIGTILQQIMESIITTISIIVLSMHREPGLNSERMSTTG PSMYMKELQEFVNRSWSHHIALFDDKQMTKKCGHELAKRCIELFLHNVCI LRPLSSCGRQRLKQDCQHMEQALKPLCPNLAELGKPSRLLRAMSLLIVQT AEELVKQTIGEDSLVPSYIVLLLLFGHAGADLQSPHTTANWSNERLIEWL DGHTAEREKLELISGALQRYRDNARRKNIQQYDEVYPMMVDYFEQALKAL P*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15100-PA | 751 | GF15100-PA | 1..751 | 1..751 | 3630 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21741-PA | 751 | GG21741-PA | 1..751 | 1..751 | 3942 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10156-PA | 763 | GH10156-PA | 9..762 | 6..750 | 3368 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fws-PI | 751 | CG6549-PI | 1..751 | 1..751 | 3842 | 100 | Plus |
fws-PH | 751 | CG6549-PH | 1..751 | 1..751 | 3842 | 100 | Plus |
fws-PD | 751 | CG6549-PD | 1..751 | 1..751 | 3842 | 100 | Plus |
fws-PA | 751 | CG6549-PA | 1..751 | 1..751 | 3842 | 100 | Plus |
fws-PC | 751 | CG6549-PC | 1..751 | 1..751 | 3842 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22420-PA | 759 | GI22420-PA | 21..757 | 22..750 | 3348 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15955-PA | 755 | GL15955-PA | 1..755 | 1..751 | 3603 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19678-PA | 755 | GA19678-PA | 1..755 | 1..751 | 3586 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17124-PA | 751 | GM17124-PA | 1..751 | 1..751 | 3986 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21865-PA | 751 | GD21865-PA | 1..751 | 1..751 | 4000 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20316-PA | 762 | GJ20316-PA | 22..761 | 19..750 | 3368 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24828-PA | 756 | GK24828-PA | 1..755 | 1..750 | 3356 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13130-PA | 751 | GE13130-PA | 1..751 | 1..751 | 3897 | 96.5 | Plus |