BDGP Sequence Production Resources |
Search the DGRC for LD24887
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 248 |
Well: | 87 |
Vector: | pOT2 |
Associated Gene/Transcript | Las-RC |
Protein status: | LD24887.pep: gold |
Preliminary Size: | 1196 |
Sequenced Size: | 1378 |
Gene | Date | Evidence |
---|---|---|
CG5231 | 2001-01-01 | Release 2 assignment |
CG5231 | 2001-09-19 | Blastp of sequenced clone |
Las | 2008-04-29 | Release 5.5 accounting |
Las | 2008-08-15 | Release 5.9 accounting |
Las | 2008-12-18 | 5.12 accounting |
1378 bp (1378 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058557
> LD24887.complete AAATCGTTTATATTTTAATAATTGTAAAATAATTCATATGTATGTCATGT TGCGAGCTTTAAAAACTCACGCGGAGGCCCCCATTGTAGTTGCCACCCGT GCGGCATCAACGAATGCGGAGAAGCTTGAGGAGATTCGTGAACGTCTGGC AAAGGGTCCGAATTTCCATGACTTTGTGCAGAATCCGGACAACACCAGAA ACGAGTGGGAACAGTACGATGGAAAGCTACGCCGCGAAAAGGGCGAGGAG CAGCGACTGCGATTGCCGCCTTGGTTAAAGACCACCATTCCCGTGGGCAA AAACTACGCCAAAATCAAGGCCCAGATGCGCGAGCTCAAGCTGTCCACCG TCTGCGAGGAGGCCCGGTGTCCCAACATCGGCGAGTGCTGGGGCGGCGGC GAGCATGGCACCCAGACAGCCACGATTATGCTTATGGGCGACACTTGCAC CAGAGGCTGTAGATTTTGTTCGGTGAAAACGGCACGCAAACCACCACCGC TGGATGTAAACGAACCCGTGAACACAGCCACGGCAATTGCCTCCTGGGGA TTGGATTACATTGTTCTGACCTCAGTTGATCGAGATGATTTGCCAGACGG TGGCTCGGAGCACATTGCCGAAACTGTTCGCGAAATTAAGGCGCGCAACT CAAACATCTTTGTGGAGTGCCTAGTACCTGATTTCCGAGGAAATCTGGAG TGTGTGAAGACGATCGCCAACAGCGGGCTGGATGTTTATGCGCACAACAT AGAGACGGTTGAGAAGCTCACTCCCTATGTGCGCGACCGGCGCGCCCACT ACCGCCAGACCCTGCAAGTGCTAACCGAAGCGAAGAGATTCAACCCCAAT CTCATCACCAAGAGTTCAATTATGCTGGGACTTGGCGAGACCGACGAGGA GATCGAGAACACCTTGAAGGATCTGCGGGAGGCCGGCGTAGATTGCGTGA CCCTGGGTCAGTACATGCAGCCCACGAATAAGCACCTCAAGGTCATCGAA TACGTCACGCCCGAGAAGTTCAAGCACTGGGAAGAGCGCGGCAACGAACT GGGTTTCCTGTACACAGCCAGTGGACCGCTGGTGCGCAGCTCCTACAAAG CCGGCGAGTTCTTCATCACAAGTATATTGGAGAATCGCAAGAAGAGGCAA AACGACACTGAAGTTCCCAAGAAGCAGTAAAATTTCTAAGCCTTTCCTAG TCGATCATGGATAGCTTTAGTTTAGCCTTTTATTCGCTACACACGCGCAT GTTGTGCAATGTATATATTAGACGACAAATTTACTGTTTTGAAATAAAAT CGAATTGTTTTTAGCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA CCAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Las-RC | 1411 | Las-RC | 87..1407 | 1..1321 | 6605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20419608..20420284 | 1321..645 | 3370 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 20420824..20421156 | 430..98 | 1665 | 100 | Minus |
chr3L | 24539361 | chr3L | 20420454..20420611 | 587..430 | 790 | 100 | Minus |
chr3L | 24539361 | chr3L | 20421216..20421312 | 97..1 | 485 | 100 | Minus |
chr3L | 24539361 | chr3L | 20420339..20420397 | 645..587 | 295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20430602..20431278 | 1321..645 | 3385 | 100 | Minus |
3L | 28110227 | 3L | 20431818..20432150 | 430..98 | 1665 | 100 | Minus |
3L | 28110227 | 3L | 20431448..20431605 | 587..430 | 790 | 100 | Minus |
3L | 28110227 | 3L | 20432210..20432306 | 97..1 | 485 | 100 | Minus |
3L | 28110227 | 3L | 20431333..20431391 | 645..587 | 295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20423702..20424378 | 1321..645 | 3385 | 100 | Minus |
3L | 28103327 | 3L | 20424918..20425250 | 430..98 | 1665 | 100 | Minus |
3L | 28103327 | 3L | 20424548..20424705 | 587..430 | 790 | 100 | Minus |
3L | 28103327 | 3L | 20425310..20425406 | 97..1 | 485 | 100 | Minus |
3L | 28103327 | 3L | 20424433..20424491 | 645..587 | 295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20419611..20420283 | 646..1318 | 99 | <- | Minus |
chr3L | 20420339..20420396 | 588..645 | 100 | <- | Minus |
chr3L | 20420454..20420610 | 431..587 | 100 | <- | Minus |
chr3L | 20420824..20421156 | 98..430 | 100 | <- | Minus |
chr3L | 20421216..20421275 | 38..97 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 1..1134 | 47..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 1..1134 | 47..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 1..1134 | 47..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 1..1134 | 47..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 1..1134 | 47..1180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 51..1368 | 1..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 51..1368 | 1..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 56..1373 | 1..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 51..1368 | 1..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Las-RC | 56..1373 | 1..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20430605..20431277 | 646..1318 | 100 | <- | Minus |
3L | 20431333..20431390 | 588..645 | 100 | <- | Minus |
3L | 20431448..20431604 | 431..587 | 100 | <- | Minus |
3L | 20431818..20432150 | 98..430 | 100 | <- | Minus |
3L | 20432210..20432306 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20430605..20431277 | 646..1318 | 100 | <- | Minus |
3L | 20431333..20431390 | 588..645 | 100 | <- | Minus |
3L | 20431448..20431604 | 431..587 | 100 | <- | Minus |
3L | 20431818..20432150 | 98..430 | 100 | <- | Minus |
3L | 20432210..20432306 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20430605..20431277 | 646..1318 | 100 | <- | Minus |
3L | 20431333..20431390 | 588..645 | 100 | <- | Minus |
3L | 20431448..20431604 | 431..587 | 100 | <- | Minus |
3L | 20431818..20432150 | 98..430 | 100 | <- | Minus |
3L | 20432210..20432306 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20425310..20425406 | 1..97 | 100 | Minus | |
arm_3L | 20424918..20425250 | 98..430 | 100 | <- | Minus |
arm_3L | 20423705..20424377 | 646..1318 | 100 | <- | Minus |
arm_3L | 20424433..20424490 | 588..645 | 100 | <- | Minus |
arm_3L | 20424548..20424704 | 431..587 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20424548..20424704 | 431..587 | 100 | <- | Minus |
3L | 20423705..20424377 | 646..1318 | 100 | <- | Minus |
3L | 20424433..20424490 | 588..645 | 100 | <- | Minus |
3L | 20424918..20425250 | 98..430 | 100 | <- | Minus |
3L | 20425310..20425406 | 1..97 | 100 | Minus |
Translation from 0 to 1179
> LD24887.hyp NRLYFNNCKIIHMYVMLRALKTHAEAPIVVATRAASTNAEKLEEIRERLA KGPNFHDFVQNPDNTRNEWEQYDGKLRREKGEEQRLRLPPWLKTTIPVGK NYAKIKAQMRELKLSTVCEEARCPNIGECWGGGEHGTQTATIMLMGDTCT RGCRFCSVKTARKPPPLDVNEPVNTATAIASWGLDYIVLTSVDRDDLPDG GSEHIAETVREIKARNSNIFVECLVPDFRGNLECVKTIANSGLDVYAHNI ETVEKLTPYVRDRRAHYRQTLQVLTEAKRFNPNLITKSSIMLGLGETDEE IENTLKDLREAGVDCVTLGQYMQPTNKHLKVIEYVTPEKFKHWEERGNEL GFLYTASGPLVRSSYKAGEFFITSILENRKKRQNDTEVPKKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Las-PC | 377 | CG5231-PC | 1..377 | 16..392 | 1991 | 100 | Plus |
Translation from 37 to 1179
> LD24887.pep MYVMLRALKTHAEAPIVVATRAASTNAEKLEEIRERLAKGPNFHDFVQNP DNTRNEWEQYDGKLRREKGEEQRLRLPPWLKTTIPVGKNYAKIKAQMREL KLSTVCEEARCPNIGECWGGGEHGTQTATIMLMGDTCTRGCRFCSVKTAR KPPPLDVNEPVNTATAIASWGLDYIVLTSVDRDDLPDGGSEHIAETVREI KARNSNIFVECLVPDFRGNLECVKTIANSGLDVYAHNIETVEKLTPYVRD RRAHYRQTLQVLTEAKRFNPNLITKSSIMLGLGETDEEIENTLKDLREAG VDCVTLGQYMQPTNKHLKVIEYVTPEKFKHWEERGNELGFLYTASGPLVR SSYKAGEFFITSILENRKKRQNDTEVPKKQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24134-PA | 376 | GF24134-PA | 1..376 | 4..379 | 1853 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13311-PA | 379 | GG13311-PA | 1..379 | 1..379 | 1940 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16746-PA | 364 | GH16746-PA | 1..362 | 4..369 | 1712 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Las-PC | 377 | CG5231-PC | 1..377 | 4..380 | 1991 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13471-PA | 364 | GI13471-PA | 1..362 | 4..369 | 1716 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11904-PA | 350 | GL11904-PA | 1..349 | 4..378 | 1573 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18753-PA | 374 | GA18753-PA | 1..373 | 4..378 | 1753 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22215-PA | 377 | GM22215-PA | 1..377 | 4..380 | 1992 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12187-PA | 372 | GD12187-PA | 1..372 | 1..380 | 1883 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11834-PA | 286 | GJ11834-PA | 1..284 | 86..369 | 1413 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17689-PA | 372 | GK17689-PA | 1..369 | 4..373 | 1700 | 85.7 | Plus |