BDGP Sequence Production Resources |
Search the DGRC for LD24910
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 249 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8010-RA |
Protein status: | LD24910.pep: gold |
Preliminary Size: | 3700 |
Sequenced Size: | 1579 |
Gene | Date | Evidence |
---|---|---|
CG8010 | 2001-01-01 | Release 2 assignment |
CG8010 | 2001-09-19 | Blastp of sequenced clone |
CG8010 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8010 | 2008-04-29 | Release 5.5 accounting |
CG8010 | 2008-08-15 | Release 5.9 accounting |
CG8010 | 2008-12-18 | 5.12 accounting |
1579 bp (1579 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058559
> LD24910.complete ACTCGCTGTGTATTTTCGGAATTTAATTTGGCAACTTCCCCCCTCCGAAT TCAGCGACTTGGCCTGCTCGCACCGCCTGGACACCTGCTACTGCAGTGCT CGCAACATGGACCACCACACGTACGCCAAGAGCGGATCCAAGAAGTGGTC CGCGGAAGAGAAGCGCAACCTGGTGGTGCAGCGGATCGCGGCGGACGAGC TCTTCTCCCGCTACTCACCGAAGCACGCGGAGCCATGGAAAAAATTCAAG GAAATGGCCAAGATCGGCGATTTCAGCGAGATTGCGCTACGCAAGCAGTG GTTCTCCATGGTGCAGCGGTACCGCATCCACAAGGCCAACACACTGGGCG TCCCACTCAACAAGCAGAGCATCGAGGAGCTGAACAAGGAATGGGAGTTT TTCGGCCTCATCCACGCCTACATGAACCAGAAGACCGCCGACCTGCACTC GTACGCGCTCAAGGAGCCGAATGTGGAGCAGCCGAACAATAACCTGGCCA TCGCCAGTGTCTACTCCTGCGACGAGGCGCAACTCTCGCCACTCATGCTG GGCGTGCTCAATGACCACAACTTTGGCGAACGCTCGCCGCCCAACGGATG CGACACCGATGACATGGACGAGTCCAACACGTCGCCCTGCCACGGGAACA GTGGCCACAGCAACAACGATGAGCTGGACAGGCTGCTGGCCGAGGCGACG GCGCGCAAGGATGCGGCAGTTGGCGACGGCGAGGATGTGTGCATGCTGAG CAACACCAACTGCCACGAAATGGAATGCGGCCCGGTGATGATTGGCGGCG AGGTGTCGCTATCCAACAGCAGATACAACGACTTCGAGGAGGCGACAGTG CCCACGGCAACGGCTGTGAAGAGCGAGAAGCCGGAGAAGCCTATCCCGAA GGCGCGTAAATTGTTAAGGAAACACCATCGCAAAGGTCTCAGCGAAAAGG AGAAGTATTACAGGCACCGCCGTCGCTACGAGCAGCGAATGGAGAAGCGT CTGATGGGACTGTGCACCGTGGTGGGACAACTGCTGAAGCAGTTTGCTCC CGACATGGATGTCCAGCCACTGTTGGCCCTGGGCAGCGATGTGACGCTCA GCTCGCCAGCGCCAAGCAGCAGTGACGAGGAGAGGAGCGAGGTTCTGGAG GAGACGGAGGAGGATCAAGAGCTCCAGCAGGAGCAGCAGCAGATGCAGCT GGAGCTGGAGCAACAGAAGCTGGGAGTCGAGGCCGATGCCATGACACTCA GAGTCTGAGCGAACGCATCCGAGTGCTTCTCTGGTCGGTCGCCTGCTTGT TTCAGGGTTCAAGTGCAAGTTCCTAGCTGTGTTGCTTCACAATCAACAAA CAAAATATCGTGTGGGCTCTCAAATGACTCCCACCACTGCGCTTCGTCGT CATTACGCGGACAACCGTCCACAGTGATTTTCCGCTAAAGAATAGGGCGT GCACAGCGCCGCATAGATAGACACGTACGTTCGTTCAGTGATAACGAAAG CATAATACGTTAATCGAAAGAACGAATGTAAACGCATTAGATAAACCAGA AAGCAAACCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19156212..19156935 | 964..241 | 3575 | 99.6 | Minus |
chrX | 22417052 | chrX | 19155551..19156149 | 1559..961 | 2995 | 100 | Minus |
chrX | 22417052 | chrX | 19157589..19157735 | 147..1 | 735 | 100 | Minus |
chrX | 22417052 | chrX | 19157418..19157511 | 240..147 | 470 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19267317..19268040 | 964..241 | 3620 | 100 | Minus |
X | 23542271 | X | 19266653..19267254 | 1562..961 | 3010 | 100 | Minus |
X | 23542271 | X | 19268676..19268822 | 147..1 | 735 | 100 | Minus |
X | 23542271 | X | 19268505..19268598 | 240..147 | 470 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19275415..19276138 | 964..241 | 3620 | 100 | Minus |
X | 23527363 | X | 19274751..19275352 | 1562..961 | 3010 | 100 | Minus |
X | 23527363 | X | 19276774..19276920 | 147..1 | 735 | 100 | Minus |
X | 23527363 | X | 19276603..19276696 | 240..147 | 470 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19155551..19156146 | 964..1559 | 92 | <- | Minus |
chrX | 19156213..19156935 | 241..963 | 99 | <- | Minus |
chrX | 19157418..19157511 | 147..240 | 100 | <- | Minus |
chrX | 19157590..19157735 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 1..1152 | 107..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 1..1152 | 107..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 1..1152 | 107..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 1..1152 | 107..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 1..1152 | 107..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 63..1621 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 63..1621 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 75..1633 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 63..1621 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8010-RA | 75..1633 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19266656..19267251 | 964..1559 | 100 | <- | Minus |
X | 19267318..19268040 | 241..963 | 100 | <- | Minus |
X | 19268505..19268598 | 147..240 | 100 | <- | Minus |
X | 19268677..19268822 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19266656..19267251 | 964..1559 | 100 | <- | Minus |
X | 19267318..19268040 | 241..963 | 100 | <- | Minus |
X | 19268505..19268598 | 147..240 | 100 | <- | Minus |
X | 19268677..19268822 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19266656..19267251 | 964..1559 | 100 | <- | Minus |
X | 19267318..19268040 | 241..963 | 100 | <- | Minus |
X | 19268505..19268598 | 147..240 | 100 | <- | Minus |
X | 19268677..19268822 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19160689..19161284 | 964..1559 | 100 | <- | Minus |
arm_X | 19161351..19162073 | 241..963 | 100 | <- | Minus |
arm_X | 19162538..19162631 | 147..240 | 100 | <- | Minus |
arm_X | 19162710..19162855 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19274754..19275349 | 964..1559 | 100 | <- | Minus |
X | 19275416..19276138 | 241..963 | 100 | <- | Minus |
X | 19276603..19276696 | 147..240 | 100 | <- | Minus |
X | 19276775..19276920 | 1..146 | 100 | Minus |
Translation from 0 to 1257
> LD24910.hyp LAVYFRNLIWQLPPSEFSDLACSHRLDTCYCSARNMDHHTYAKSGSKKWS AEEKRNLVVQRIAADELFSRYSPKHAEPWKKFKEMAKIGDFSEIALRKQW FSMVQRYRIHKANTLGVPLNKQSIEELNKEWEFFGLIHAYMNQKTADLHS YALKEPNVEQPNNNLAIASVYSCDEAQLSPLMLGVLNDHNFGERSPPNGC DTDDMDESNTSPCHGNSGHSNNDELDRLLAEATARKDAAVGDGEDVCMLS NTNCHEMECGPVMIGGEVSLSNSRYNDFEEATVPTATAVKSEKPEKPIPK ARKLLRKHHRKGLSEKEKYYRHRRRYEQRMEKRLMGLCTVVGQLLKQFAP DMDVQPLLALGSDVTLSSPAPSSSDEERSEVLEETEEDQELQQEQQQMQL ELEQQKLGVEADAMTLRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8010-PA | 383 | CG8010-PA | 1..383 | 36..418 | 2009 | 100 | Plus |
Translation from 106 to 1257
> LD24910.pep MDHHTYAKSGSKKWSAEEKRNLVVQRIAADELFSRYSPKHAEPWKKFKEM AKIGDFSEIALRKQWFSMVQRYRIHKANTLGVPLNKQSIEELNKEWEFFG LIHAYMNQKTADLHSYALKEPNVEQPNNNLAIASVYSCDEAQLSPLMLGV LNDHNFGERSPPNGCDTDDMDESNTSPCHGNSGHSNNDELDRLLAEATAR KDAAVGDGEDVCMLSNTNCHEMECGPVMIGGEVSLSNSRYNDFEEATVPT ATAVKSEKPEKPIPKARKLLRKHHRKGLSEKEKYYRHRRRYEQRMEKRLM GLCTVVGQLLKQFAPDMDVQPLLALGSDVTLSSPAPSSSDEERSEVLEET EEDQELQQEQQQMQLELEQQKLGVEADAMTLRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15952-PA | 356 | GF15952-PA | 1..340 | 1..339 | 1166 | 67 | Plus |
Dana\GF13939-PA | 169 | GF13939-PA | 1..47 | 123..169 | 219 | 85.1 | Plus |
Dana\GF23431-PA | 115 | GF23431-PA | 32..102 | 272..342 | 215 | 56.3 | Plus |
Dana\GF19626-PA | 114 | GF19626-PA | 34..101 | 275..342 | 215 | 58.8 | Plus |
Dana\GF20168-PA | 115 | GF20168-PA | 35..102 | 275..342 | 215 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18065-PA | 382 | GG18065-PA | 1..382 | 1..383 | 1757 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17716-PA | 395 | GH17716-PA | 1..360 | 1..323 | 571 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8010-PA | 383 | CG8010-PA | 1..383 | 1..383 | 2009 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15461-PA | 388 | GI15461-PA | 1..153 | 1..157 | 559 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13723-PA | 387 | GL13723-PA | 1..115 | 1..117 | 318 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27005-PA | 387 | GA27005-PA | 1..115 | 1..117 | 316 | 52.1 | Plus |
Dpse\GA23145-PA | 335 | GA23145-PA | 1..115 | 1..117 | 280 | 46.2 | Plus |
Dpse\GA23128-PA | 434 | GA23128-PA | 1..115 | 1..117 | 275 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22752-PA | 383 | GM22752-PA | 1..383 | 1..383 | 1843 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15588-PA | 383 | GD15588-PA | 1..383 | 1..383 | 1808 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19174-PA | 398 | GJ19174-PA | 1..239 | 1..263 | 570 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15536-PA | 365 | GK15536-PA | 1..363 | 1..347 | 1060 | 59 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17401-PA | 389 | GE17401-PA | 1..389 | 1..383 | 1625 | 86.5 | Plus |