BDGP Sequence Production Resources |
Search the DGRC for LD24944
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 249 |
Well: | 44 |
Vector: | pOT2 |
Associated Gene/Transcript | osk-RC |
Protein status: | LD24944.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 2261 |
Gene | Date | Evidence |
---|---|---|
CG10901 | 2001-01-01 | Release 2 assignment |
CG10901 | 2001-09-19 | Blastp of sequenced clone |
osk | 2008-04-29 | Release 5.5 accounting |
osk | 2008-04-29 | Picked prior to 5.5 |
osk | 2008-08-15 | Release 5.9 accounting |
osk | 2008-12-18 | 5.12 accounting |
2261 bp (2261 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058560
> LD24944.complete CCGCAGTCACAAGTGAATTCCCCAGCAAACCGATCAGTTATACCAGCACC AATACTTCCGCCAAAACCTATTATCTTAAGTCCGTGAAAAAGCGGGTGAC CACGTGTTTCCAGCAGTTGCGCGATAAACTCCAGTCATCCGGTTCCTTTC GCAAGAGTTCCTCCAGCTGCCTCAACCAGATCTTCGTAAGGTCCGATTTC TCCGCATGCGGCGAACGCTTTCGGAAGATCTTCAAATCGGCGCGAAAAAC CGAATTGCCGGAGTTGTGGAAGGTGCCATTGGTGGCCCATGAACTCACCA GCCGGCAGAGCAGCCAGCAGTTGCAAGTCGTAGCCAGACTCTTCTCGTCC ACTCAGATTTCCACCAAGGAAATCACCTACAACAGCAACAGCAACACCAG CGAGAACAACATGACCATCATCGAGAGCAACTATATATCCGTGCGCGAGG AATATCCCGATATAGATAGTGAGGTGCGCGCCATATTGCTGAGCCACGCC CAGAATGGAATCACGATATCGAGCATCAAGAGTGAATATCGAAAACTGAC GGGCAATCCATTTCCACTGCACGACAACGTGACGGATTTCCTGCTGACCA TTCCCAATGTGACCGCTGAGTGCAGCGAGTCCGGTAAGCGGATCTTCAAC CTGAAAGCGAGCCTGAAGAACGGTCACCTCCTGGATATGGTGCTCAACCA GAAAGAGCGCACCAGCGACTACAGCAGCGGAGCTCCGTCCCTGGAGAACA TACCACGAGCACCTCCACGCTACTGGAAGAATCCCTTCAAACGGAGGGCT CTGTCCCAGCTGAACACCAGCCCGAGGACCGTGCCCAAGATAACGGATGA AAAGACCAAGGATATCGCCACCAGGCCGGTTTCGCTGCATCAAATGGCCA ATGAGGCAGCGGAGTCGAACTGGTGCTACCAGGATAATTGGAAGCATCTC AACAATTTCTACCAGCAAGCCAGCGTAAATGCGCCAAAAATGCCAGTACC CATCAACATCTACAGCCCCGATGCCCCAGAGGAACCAATCAATTTGGCTC CACCTGGGCATCAGCCAAGCTGCAGAACCCAAAGCCAGAAAACCGAACCG ACTGAAAACCGCCATTTGGGCATCTTTGTGCATCCATTTAACGGCATGAA CATAATGAAGAGACGCCACGAAATGACGCCCACGCCAACGATTTTAACCA GTGGAACCTACAACGATTCTCTGCTGACGATTAACTCGGATTACGATGCC TATCTGCTGGACTTTCCGCTTATGGGCGATGATTTTATGCTATATCTCGC CCGAATGGAGCTAAAATGCCGATTTAGGCGTCACGAACGCGTCCTGCAGT CAGGACTTTGTGTATCCGGACTGACGATCAATGGCGCCCGAAATCGTTTA AAAAGAGTCCAATTACCCGAGGGTACTCAGATCATCGTCAATATCGGATC GGTGGACATTATGCGCGGCAAGCCTTTGGTTCAGATCGAGCACGATTTTC GGCTACTGATCAAGGAGATGCACAATATGCGATTGGTGCCGATTCTAACA AATCTTGCACCGCTGGGCAACTATTGTCACGATAAGGTATTATGTGACAA AATCTACCGATTCAACAAGTTTATCCGAAGCGAATGCTGTCACCTAAAGG TCATCGACATACACTCCTGTCTAATCAACGAAAGGGGCGTGGTGCGATTT GATTGCTTTCAGGCCTCACCACGCCAAGTCACCGGTTCCAAGGAACCCTA TCTGTTCTGGAACAAAATCGGTCGGCAGCGCGTACTGCAAGTTATTGAAA CGAGTCTGGAGTATTAAGTTGGGTTCTTAATCAAGATACATATATGCAAA TTTTGACTGGGCTGGCACCGGAACCGACAAAATCAACGCCGCGGCTGATT TATTATTGATGTGCTCAAGCAAATTCAAGTGAAGCATTTGCGCGATTTTC GTCTTTCTGTTTCCGTTTGCAAAAAAGTTTATAAAATGCTTACACTCTGC TGCAGACACGCCAACCGGAAGTGCGCACTAAGCGCTTGTTTGTAGCACAG TGTAGAATTCTGGCGTAATTTACAGCTCTACTTTAAAGTCTTCTAGATAG CTATCTACTATTTATAAACTTATTTATTGTCTTGAATGTATGTTAATTGT ATGTATTGATGGTGATCACGTTTTTTTTGTCCTATAACAAGCTGCAATGT AAAATCCAAAAAAAAAATGAAAAAATAAAATAAAAGGGAAATCAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
osk.a | 3047 | osk.a | 197..2079 | 1..1883 | 9415 | 100 | Plus |
osk-RC | 3047 | osk-RC | 197..2079 | 1..1883 | 9415 | 100 | Plus |
osk-RA | 3047 | osk-RA | 197..2079 | 1..1883 | 9415 | 100 | Plus |
osk.a | 3047 | osk.a | 2681..3047 | 1877..2243 | 1835 | 100 | Plus |
osk-RC | 3047 | osk-RC | 2681..3047 | 1877..2243 | 1835 | 100 | Plus |
osk-RA | 3047 | osk-RA | 2681..3047 | 1877..2243 | 1835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4762370..4763134 | 950..1714 | 3810 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 4761083..4761617 | 1..535 | 2660 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 4761857..4762274 | 532..949 | 2075 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 4763963..4764329 | 1877..2243 | 1835 | 100 | Plus |
chr3R | 27901430 | chr3R | 4763193..4763361 | 1715..1883 | 845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8936442..8937206 | 950..1714 | 3825 | 100 | Plus |
3R | 32079331 | 3R | 8935150..8935684 | 1..535 | 2675 | 100 | Plus |
3R | 32079331 | 3R | 8935929..8936346 | 532..949 | 2090 | 100 | Plus |
3R | 32079331 | 3R | 8938035..8938403 | 1877..2245 | 1845 | 100 | Plus |
3R | 32079331 | 3R | 8937265..8937433 | 1715..1883 | 845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8677273..8678037 | 950..1714 | 3825 | 100 | Plus |
3R | 31820162 | 3R | 8675981..8676515 | 1..535 | 2675 | 100 | Plus |
3R | 31820162 | 3R | 8676760..8677177 | 532..949 | 2090 | 100 | Plus |
3R | 31820162 | 3R | 8678866..8679234 | 1877..2245 | 1845 | 100 | Plus |
3R | 31820162 | 3R | 8678096..8678264 | 1715..1883 | 845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2435 | 362..436 | 159 | 68 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6809 | 362..431 | 143 | 67.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..6897 | 372..435 | 142 | 71.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2379..2453 | 362..436 | 141 | 65.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2528..2649 | 314..431 | 141 | 62.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6706..6788 | 347..431 | 141 | 64.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2382 | 362..431 | 134 | 65.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2340..2409 | 362..431 | 134 | 65.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2373..2449 | 362..435 | 134 | 67.5 | Plus |
BS | 5142 | BS BS 5142bp | 5036..5138 | 2137..2241 | 132 | 62.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6829 | 362..430 | 129 | 65.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6851 | 362..431 | 125 | 64.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6860..6920 | 362..422 | 125 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2317..2376 | 372..431 | 120 | 66.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1119..1163 | 372..416 | 117 | 73.3 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7952..7983 | 371..402 | 115 | 84.4 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9396..9427 | 371..402 | 115 | 84.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4761083..4761613 | 1..531 | 99 | -> | Plus |
chr3R | 4761857..4762274 | 532..949 | 99 | -> | Plus |
chr3R | 4762370..4763134 | 950..1714 | 99 | -> | Plus |
chr3R | 4763193..4763359 | 1715..1881 | 100 | -> | Plus |
chr3R | 4763968..4764329 | 1882..2243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RA | 5..1821 | 1..1817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RA | 5..1821 | 1..1817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RA | 5..1821 | 1..1817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RA | 5..1821 | 1..1817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RA | 5..1821 | 1..1817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RA | 20..1896 | 1..1877 | 100 | <- | Plus |
osk-RA | 2506..2870 | 1878..2243 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RA | 20..1896 | 1..1877 | 100 | <- | Plus |
osk-RA | 2506..2870 | 1878..2243 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RC | 25..1901 | 1..1877 | 100 | <- | Plus |
osk-RC | 2511..2869 | 1878..2237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RA | 20..1896 | 1..1877 | 100 | <- | Plus |
osk-RA | 2506..2870 | 1878..2243 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
osk-RC | 25..1901 | 1..1877 | 100 | <- | Plus |
osk-RC | 2511..2869 | 1878..2237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8935150..8935680 | 1..531 | 100 | -> | Plus |
3R | 8935929..8936346 | 532..949 | 100 | -> | Plus |
3R | 8936442..8937206 | 950..1714 | 100 | -> | Plus |
3R | 8937265..8937431 | 1715..1881 | 100 | -> | Plus |
3R | 8938040..8938401 | 1882..2243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8935150..8935680 | 1..531 | 100 | -> | Plus |
3R | 8935929..8936346 | 532..949 | 100 | -> | Plus |
3R | 8936442..8937206 | 950..1714 | 100 | -> | Plus |
3R | 8937265..8937431 | 1715..1881 | 100 | -> | Plus |
3R | 8938040..8938401 | 1882..2243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8935150..8935680 | 1..531 | 100 | -> | Plus |
3R | 8935929..8936346 | 532..949 | 100 | -> | Plus |
3R | 8936442..8937206 | 950..1714 | 100 | -> | Plus |
3R | 8937265..8937431 | 1715..1881 | 100 | -> | Plus |
3R | 8938040..8938401 | 1882..2243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4760872..4761402 | 1..531 | 100 | -> | Plus |
arm_3R | 4761651..4762068 | 532..949 | 100 | -> | Plus |
arm_3R | 4762164..4762928 | 950..1714 | 100 | -> | Plus |
arm_3R | 4762987..4763153 | 1715..1881 | 100 | -> | Plus |
arm_3R | 4763762..4764123 | 1882..2243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8678096..8678262 | 1715..1881 | 100 | -> | Plus |
3R | 8678871..8679232 | 1882..2243 | 100 | Plus | |
3R | 8675981..8676511 | 1..531 | 100 | -> | Plus |
3R | 8676760..8677177 | 532..949 | 100 | -> | Plus |
3R | 8677273..8678037 | 950..1714 | 100 | -> | Plus |
Translation from 2 to 1816
> LD24944.pep AVTSEFPSKPISYTSTNTSAKTYYLKSVKKRVTTCFQQLRDKLQSSGSFR KSSSSCLNQIFVRSDFSACGERFRKIFKSARKTELPELWKVPLVAHELTS RQSSQQLQVVARLFSSTQISTKEITYNSNSNTSENNMTIIESNYISVREE YPDIDSEVRAILLSHAQNGITISSIKSEYRKLTGNPFPLHDNVTDFLLTI PNVTAECSESGKRIFNLKASLKNGHLLDMVLNQKERTSDYSSGAPSLENI PRAPPRYWKNPFKRRALSQLNTSPRTVPKITDEKTKDIATRPVSLHQMAN EAAESNWCYQDNWKHLNNFYQQASVNAPKMPVPINIYSPDAPEEPINLAP PGHQPSCRTQSQKTEPTENRHLGIFVHPFNGMNIMKRRHEMTPTPTILTS GTYNDSLLTINSDYDAYLLDFPLMGDDFMLYLARMELKCRFRRHERVLQS GLCVSGLTINGARNRLKRVQLPEGTQIIVNIGSVDIMRGKPLVQIEHDFR LLIKEMHNMRLVPILTNLAPLGNYCHDKVLCDKIYRFNKFIRSECCHLKV IDIHSCLINERGVVRFDCFQASPRQVTGSKEPYLFWNKIGRQRVLQVIET SLEY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17692-PA | 602 | GF17692-PA | 3..602 | 1..604 | 1784 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13545-PA | 625 | GG13545-PA | 3..625 | 1..604 | 2778 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23955-PA | 600 | GH23955-PA | 378..596 | 386..604 | 921 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
osk-PA | 606 | CG10901-PA | 3..606 | 1..604 | 3165 | 100 | Plus |
osk-PC | 468 | CG10901-PC | 1..468 | 137..604 | 2483 | 100 | Plus |
osk-PD | 254 | CG10901-PD | 1..254 | 330..604 | 1318 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10055-PA | 600 | GI10055-PA | 6..600 | 4..604 | 1416 | 50.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21554-PA | 619 | GL21554-PA | 28..619 | 25..604 | 1521 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10627-PA | 619 | GA10627-PA | 28..619 | 25..604 | 1520 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23770-PA | 610 | GM23770-PA | 3..610 | 1..604 | 3040 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18580-PA | 611 | GD18580-PA | 3..611 | 1..604 | 2950 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\osk-PA | 595 | GJ23790-PA | 6..594 | 4..604 | 1457 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11117-PA | 357 | GK11117-PA | 137..357 | 386..604 | 886 | 72.4 | Plus |
Dwil\GK11116-PA | 358 | GK11116-PA | 6..318 | 4..320 | 575 | 41.6 | Plus |
Dwil\GK11117-PA | 357 | GK11117-PA | 1..136 | 435..570 | 553 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25914-PA | 625 | GE25914-PA | 3..625 | 1..604 | 2836 | 85.9 | Plus |
Translation from 2 to 1816
> LD24944.hyp AVTSEFPSKPISYTSTNTSAKTYYLKSVKKRVTTCFQQLRDKLQSSGSFR KSSSSCLNQIFVRSDFSACGERFRKIFKSARKTELPELWKVPLVAHELTS RQSSQQLQVVARLFSSTQISTKEITYNSNSNTSENNMTIIESNYISVREE YPDIDSEVRAILLSHAQNGITISSIKSEYRKLTGNPFPLHDNVTDFLLTI PNVTAECSESGKRIFNLKASLKNGHLLDMVLNQKERTSDYSSGAPSLENI PRAPPRYWKNPFKRRALSQLNTSPRTVPKITDEKTKDIATRPVSLHQMAN EAAESNWCYQDNWKHLNNFYQQASVNAPKMPVPINIYSPDAPEEPINLAP PGHQPSCRTQSQKTEPTENRHLGIFVHPFNGMNIMKRRHEMTPTPTILTS GTYNDSLLTINSDYDAYLLDFPLMGDDFMLYLARMELKCRFRRHERVLQS GLCVSGLTINGARNRLKRVQLPEGTQIIVNIGSVDIMRGKPLVQIEHDFR LLIKEMHNMRLVPILTNLAPLGNYCHDKVLCDKIYRFNKFIRSECCHLKV IDIHSCLINERGVVRFDCFQASPRQVTGSKEPYLFWNKIGRQRVLQVIET SLEY*