BDGP Sequence Production Resources |
Search the DGRC for LD25005
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 250 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | CTPsyn-RA |
Protein status: | LD25005.pep: gold |
Preliminary Size: | 2426 |
Sequenced Size: | 2397 |
Gene | Date | Evidence |
---|---|---|
CG6854 | 2002-12-10 | Blastp of sequenced clone |
CG6854 | 2008-04-29 | Release 5.5 accounting |
CG6854 | 2008-08-15 | Release 5.9 accounting |
CG6854 | 2008-12-18 | 5.12 accounting |
2397 bp (2397 high quality bases) assembled on 2002-12-10
GenBank Submission: BT003255
> LD25005.complete GTGGTCATACCATAAATACGTATGAGATATTAAACGAATCCAATTTCTAA AACCACGTGCAGCAAAGGCAAATAAACAATAAATTGTGGCTCGGATTGCC TCAGATTGAGTGTCCACCGCGAATTGAACCGATAACACGATAATCCTCCA CATTTGGTGATCCCAAAGATTGACATTCGAGACGAAAGGATGAAATACAT CCTGGTAACTGGTGGCGTCATTAGTGGCGTGGGAAAAGGAGTGATTGCCT CCTCGTTCGGAACGCTTTTGAAATCCTGTGGTCTGGATGTAACCTCGATC AAGATTGACCCCTATATCAATATAGATGCTGGAACCTTTTCGCCTTATGA GCATGGCGAGGTTTACGTTTTGGACGATGGCGCCGAGGTGGATCTGGATC TGGGAAACTATGAACGGTTTTTGGATGTTACCCTGCATCGGGACAACAAC ATAACCACCGGAAAAATTTACAAGTTGGTCATTGAGAAGGAGCGCACTGG CGAGTACTTGGGCAAAACGGTTCAAGTTGTCCCACACATCACTGATGCCA TTCAGGAATGGGTGGAGCGCGTGGCCCAGACACCCGTTCAGGGATCTTCA AAGCCACAGGTGTGCATCGTGGAATTGGGAGGAACGATTGGTGACATCGA AGGCATGCCTTTCGTAGAGGCCTTCCGTCAGTTTCAGTTCCGCGTAAAGA GAGAGAACTTCTGTTTGGCCCATGTGTCGCTGGTTCCGTTGCCAAAGGCT ACCGGAGAACCCAAGACCAAGCCCACACAAAGTTCGGTCAGAGAACTGAG AGGATGTGGCCTGAGTCCCGATTTGATTGTCTGCCGATCGGAGAAACCCA TTGGACTGGAGGTCAAGGAGAAGATCAGCAACTTTTGTCATGTGGGGCCG GATCAGGTGATATGCATCCACGATTTGAACTCCATTTATCATGTTCCGCT GCTGATGGAGCAGAATGGTGTTATTGAATACCTAAATGAGCGCCTACAGC TTAATATCGACATGAGCAAGAGGACCAAATGCTTGCAGCAATGGCGAGAT TTGGCGCGTCGAACGGAGACCGTTCGCCGTGAAGTTTGCATCGCCGTCGT GGGAAAGTACACCAAGTTCACGGATTCGTACGCCTCCGTAGTTAAAGCCC TGCAACATGCCGCCCTGGCAGTGAATCGCAAACTGGAACTGGTCTTTATC GAGTCGTGCCTGCTGGAGGAGGAAACTTTGCATTCTGAGCCGAGCAAGTA CCACAAGGAGTGGCAGAAGCTATGCGATAGCCATGGCATCCTAGTCCCCG GTGGATTCGGTTCCCGTGGAATGGAGGGCAAGATTCGTGCATGCCAATGG GCGCGAGAGAATCAAAAGCCATTGCTTGGCATCTGCTTGGGTCTGCAAGC GGCGGTCATTGAATTCGCACGAAATAAACTTGGTCTCAAGGATGCAAACA CCACAGAAATCGATCCGAACACAGCTAATGCCTTGGTCATCGATATGCCA GAGCATCACACGGGTCAATTGGGCGGCACTATGCGCTTGGGCAAGCGAAT AACTGTTTTCTCTGATGGTCCTAGTGTCATTCGCCAGTTGTATGGCAATC CGAAAAGCGTGCAGGAGCGTCATCGGCATCGTTACGAGGTTAATCCCAAA TACGTGCATCTGCTGGAAGAGCAAGGCATGCGATTTGTGGGCACCGACGT CGACAAAACTAGGATGGAAATCATTGAGCTCAGCGGTCATCCCTACTTTG TTGCCACCCAATATCATCCAGAGTACTTGTCGCGGCCTCTGAAGCCGTCG CCTCCTTTCCTCGGCCTGATCCTGGCCTCAGTGGATCGATTGAACCAATA TATTCAGCGCGGTTGCCGCCTGTCGCCCCGCCAGCTATCCGACGCATCCT CGGATGAGGAGGACAGTGTTGTGGGCTTGGCCGGAGCAACAAAATCGCTG AGCTCCTTGAAAATTCCCATTACACCCACAAATGGAATATCAAAAAGTTG CAATGGTAGCATAAGCACTTCCGACAGCGAAGGTGCCTGCGGAGGCGTTG ATCCTACCAATGGCCATAAGTAAACTAGTGAACGGTATCTTATATCCTAA AGTGTTTAACATCCGATTATCAGACGTACTTTTGTTATCGCAAAACCCCA AAAGTTTGGGATAACTTAAGTATTACTGGGTGGGTATAATACGGTATTTG CGAATTGAAAATTTTGACCTTTTATGAAAGAGGCATTAATAATAAGAAAC CCTTTATAATTTCTCCTAAGCTTAAGTAAACTACGATGTTACTTTCCGTA CATTTTTAATTTATATGAAAATCTTAATTCATATATATTTTTTGGATGCG AAAAAAAAAATAACTAATGGAACAATTTCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15101736..15103085 | 1029..2379 | 6630 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 15101168..15101671 | 525..1028 | 2490 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 15088229..15088592 | 1..364 | 1790 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 15100898..15101069 | 355..526 | 860 | 100 | Plus |
chr3L | 24539361 | chr3L | 15092315..15092549 | 2112..2347 | 690 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15111653..15113006 | 1029..2382 | 6770 | 100 | Plus |
3L | 28110227 | 3L | 15111085..15111588 | 525..1028 | 2520 | 100 | Plus |
3L | 28110227 | 3L | 15098162..15098525 | 1..364 | 1790 | 99.5 | Plus |
3L | 28110227 | 3L | 15110815..15110986 | 355..526 | 860 | 100 | Plus |
3L | 28110227 | 3L | 15102254..15102488 | 2112..2347 | 690 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15104753..15106106 | 1029..2382 | 6770 | 100 | Plus |
3L | 28103327 | 3L | 15104185..15104688 | 525..1028 | 2520 | 100 | Plus |
3L | 28103327 | 3L | 15091262..15091625 | 1..364 | 1790 | 99.4 | Plus |
3L | 28103327 | 3L | 15103915..15104086 | 355..526 | 860 | 100 | Plus |
3L | 28103327 | 3L | 15095419..15095588 | 2181..2347 | 555 | 89.4 | Plus |
3L | 28103327 | 3L | 15095354..15095423 | 2112..2181 | 245 | 90 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15088229..15088583 | 1..355 | 100 | -> | Plus |
chr3L | 15100899..15101069 | 356..526 | 100 | -> | Plus |
chr3L | 15101170..15101671 | 527..1028 | 99 | -> | Plus |
chr3L | 15101736..15103085 | 1029..2379 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RC | 1..1884 | 190..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RC | 1..1884 | 190..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RC | 1..1884 | 190..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RC | 1..1884 | 190..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RA | 1..1884 | 190..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RC | 26..2380 | 1..2355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RC | 26..2380 | 1..2355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RC | 28..2406 | 1..2379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RC | 26..2380 | 1..2355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RA | 28..2406 | 1..2379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15098162..15098516 | 1..355 | 100 | -> | Plus |
3L | 15110816..15110986 | 356..526 | 100 | -> | Plus |
3L | 15111087..15111588 | 527..1028 | 100 | -> | Plus |
3L | 15111653..15113003 | 1029..2379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15098162..15098516 | 1..355 | 100 | -> | Plus |
3L | 15110816..15110986 | 356..526 | 100 | -> | Plus |
3L | 15111087..15111588 | 527..1028 | 100 | -> | Plus |
3L | 15111653..15113003 | 1029..2379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15098162..15098516 | 1..355 | 100 | -> | Plus |
3L | 15110816..15110986 | 356..526 | 100 | -> | Plus |
3L | 15111087..15111588 | 527..1028 | 100 | -> | Plus |
3L | 15111653..15113003 | 1029..2379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15103916..15104086 | 356..526 | 100 | -> | Plus |
arm_3L | 15091262..15091616 | 1..355 | 100 | -> | Plus |
arm_3L | 15104187..15104688 | 527..1028 | 100 | -> | Plus |
arm_3L | 15104753..15106103 | 1029..2379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15091262..15091616 | 1..355 | 100 | -> | Plus |
3L | 15103916..15104086 | 356..526 | 100 | -> | Plus |
3L | 15104187..15104688 | 527..1028 | 100 | -> | Plus |
3L | 15104753..15106103 | 1029..2379 | 100 | Plus |
Translation from 189 to 2072
> LD25005.pep MKYILVTGGVISGVGKGVIASSFGTLLKSCGLDVTSIKIDPYINIDAGTF SPYEHGEVYVLDDGAEVDLDLGNYERFLDVTLHRDNNITTGKIYKLVIEK ERTGEYLGKTVQVVPHITDAIQEWVERVAQTPVQGSSKPQVCIVELGGTI GDIEGMPFVEAFRQFQFRVKRENFCLAHVSLVPLPKATGEPKTKPTQSSV RELRGCGLSPDLIVCRSEKPIGLEVKEKISNFCHVGPDQVICIHDLNSIY HVPLLMEQNGVIEYLNERLQLNIDMSKRTKCLQQWRDLARRTETVRREVC IAVVGKYTKFTDSYASVVKALQHAALAVNRKLELVFIESCLLEEETLHSE PSKYHKEWQKLCDSHGILVPGGFGSRGMEGKIRACQWARENQKPLLGICL GLQAAVIEFARNKLGLKDANTTEIDPNTANALVIDMPEHHTGQLGGTMRL GKRITVFSDGPSVIRQLYGNPKSVQERHRHRYEVNPKYVHLLEEQGMRFV GTDVDKTRMEIIELSGHPYFVATQYHPEYLSRPLKPSPPFLGLILASVDR LNQYIQRGCRLSPRQLSDASSDEEDSVVGLAGATKSLSSLKIPITPTNGI SKSCNGSISTSDSEGACGGVDPTNGHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23684-PA | 1010 | GF23684-PA | 440..1010 | 57..627 | 2863 | 92.5 | Plus |
Dana\GF23683-PA | 66 | GF23683-PA | 1..55 | 1..55 | 288 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15718-PA | 580 | GG15718-PA | 12..580 | 56..624 | 2862 | 93.7 | Plus |
Dere\GG15716-PA | 64 | GG15716-PA | 1..63 | 1..63 | 305 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14829-PA | 678 | GH14829-PA | 83..676 | 45..620 | 2385 | 75.9 | Plus |
Dgri\GH14828-PA | 64 | GH14828-PA | 1..55 | 1..55 | 278 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CTPsyn-PC | 627 | CG45070-PC | 1..627 | 1..627 | 3279 | 100 | Plus |
CTPsyn-PA | 627 | CG45070-PA | 1..627 | 1..627 | 3279 | 100 | Plus |
CTPsyn-PB | 623 | CG45070-PB | 53..623 | 57..627 | 2991 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13933-PA | 689 | GI13933-PA | 83..685 | 45..619 | 2475 | 77.6 | Plus |
Dmoj\GI13932-PA | 63 | GI13932-PA | 1..60 | 1..60 | 291 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24720-PA | 928 | GL24720-PA | 328..921 | 44..626 | 2721 | 87.3 | Plus |
Dper\GL24719-PA | 61 | GL24719-PA | 1..56 | 1..56 | 288 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23623-PA | 690 | GA23623-PA | 83..683 | 45..626 | 2711 | 86.8 | Plus |
Dpse\GA23622-PA | 61 | GA23622-PA | 1..56 | 1..56 | 288 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25505-PA | 585 | GM25505-PA | 5..584 | 57..626 | 2903 | 94.1 | Plus |
Dsec\GM25503-PA | 56 | GM25503-PA | 1..55 | 1..55 | 290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14523-PA | 1013 | GD14523-PA | 433..1012 | 57..626 | 2917 | 94.3 | Plus |
Dsim\GD14522-PA | 56 | GD14522-PA | 1..55 | 1..55 | 290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13723-PA | 665 | GJ13723-PA | 83..663 | 45..620 | 2505 | 80.7 | Plus |
Dvir\GJ13722-PA | 59 | GJ13722-PA | 1..56 | 1..56 | 292 | 98.2 | Plus |
Translation from 189 to 2072
> LD25005.hyp MKYILVTGGVISGVGKGVIASSFGTLLKSCGLDVTSIKIDPYINIDAGTF SPYEHGEVYVLDDGAEVDLDLGNYERFLDVTLHRDNNITTGKIYKLVIEK ERTGEYLGKTVQVVPHITDAIQEWVERVAQTPVQGSSKPQVCIVELGGTI GDIEGMPFVEAFRQFQFRVKRENFCLAHVSLVPLPKATGEPKTKPTQSSV RELRGCGLSPDLIVCRSEKPIGLEVKEKISNFCHVGPDQVICIHDLNSIY HVPLLMEQNGVIEYLNERLQLNIDMSKRTKCLQQWRDLARRTETVRREVC IAVVGKYTKFTDSYASVVKALQHAALAVNRKLELVFIESCLLEEETLHSE PSKYHKEWQKLCDSHGILVPGGFGSRGMEGKIRACQWARENQKPLLGICL GLQAAVIEFARNKLGLKDANTTEIDPNTANALVIDMPEHHTGQLGGTMRL GKRITVFSDGPSVIRQLYGNPKSVQERHRHRYEVNPKYVHLLEEQGMRFV GTDVDKTRMEIIELSGHPYFVATQYHPEYLSRPLKPSPPFLGLILASVDR LNQYIQRGCRLSPRQLSDASSDEEDSVVGLAGATKSLSSLKIPITPTNGI SKSCNGSISTSDSEGACGGVDPTNGHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CTPsyn-PC | 627 | CG45070-PC | 1..627 | 1..627 | 3279 | 100 | Plus |
CTPsyn-PA | 627 | CG45070-PA | 1..627 | 1..627 | 3279 | 100 | Plus |
CTPsyn-PB | 623 | CG45070-PB | 53..623 | 57..627 | 2991 | 100 | Plus |