BDGP Sequence Production Resources |
Search the DGRC for LD25118
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 251 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | mRpL37-RB |
Protein status: | LD25118.pep: gold |
Sequenced Size: | 1377 |
Gene | Date | Evidence |
---|---|---|
mRpL37 | 2008-04-29 | Release 5.5 accounting |
mRpL37 | 2008-04-29 | Picked prior to 5.5 |
mRpL37 | 2008-08-15 | Release 5.9 accounting |
mRpL37 | 2008-12-18 | 5.12 accounting |
1377 bp assembled on 2007-09-19
GenBank Submission: BT030992
> LD25118.complete TTTCATAACCAGTCCGCCGGGCTTCATTTCATTGAACGAAAACATAAGCA AATCCTAACTTAAATGAGGCTGACGAACACTCTCTGTGCCCAGCACATCG GCTGGCATTTCAAGAAGCACTGGCTGGTCCAGGGTAGGCGAGTCCCCAAG GAAACTGGCGCCGCGGCGGAGCTCCTGAAGCTAGGTGTTCTGGTGAAGAA TCCCGAGGATCTCTTGAACGCCAAAGTTGAAAAAAAACTAGTGGACATTG TTGGCGCACGCGAAAAACCCGTTCCCGAGGACAGCAGGCACCCTGACTGG CACCCCACAGTTTGCAACACTTACTCCGACAACAGCGTGCTAATTGGTGG ATTGCCGCAGGCCCAGGTGCTGACCAACTCCATTGTGATCCAAACATTTC CCAAGCACATCGAGGATGCCATTGCAAGTCAGCAGTTGCCAAATTCCGTA GACAAGAGTGTCCGGCATGCGATTCTGGCATCCCACGTGCTTGATGCAGA GCAAGTCAAGCTGCCCAAGGTGAGGCTACCGGAGAGGCCGGCCTTTAACC TGCCCCGCTCCTACGGAATATCACACGAAAGGGTCAACCGACTGTTGGTA AACAAACTCCTGCATGAAAGTGAAAAACTGGCTGGCCGTTCAGTCTCTGT TCGAAGGAAGCTGATAGACAACGCGTCTTTTAAGACTTTTTTAAGCAAAG ACGGGGATCTGCTAGGATTCTCAATCAATGCTGAAAAAGTGGTATTTGCC AACCGAGCCATCGAAGGTGTTAAGGGAAAATTCGAAGGAGATCTGCCTGA TCTTTACCCCATGAAGAGTACTATATCGATTCCGAAGTACCACATTTACC AAGCTAAGAACTTGTATCCTTTGCGCTCGGACATCACCTGCTCCCACCCG CACACCATCTTTACGGTGTTTAACAAACACCAAGTCAAAAACTCCCACGG ATCCGAGGTCACAACTTCTCAGCTTCAGGCGAGGACACTGGTCAAAGCTT TCGTTGTGGCAGCCGCTCGAGCAAAGCAACTGCATGGGGATTCCGTAGGA GCTCTTCCCAAACCAATTGTTGTGCAGAGCGTCCAGACTGACGGTAGGAC GTTCCACTTCGGAGTGTTGCAGCTGAATACCCTCGATCTTGGTGCCAATA GCACTGCCAAGAACTATTGGTTCCATAGGCAAAACTACAATCTGTTTGCT GAATGCTCTTATGAAGGAGGGCGAACGCATTTGGATAATTACAATGGCGA GGTCTTCCGCATATTTAATGCTTTCTATAACAATTCCTAAAATAGAAATC TTACTGAATAATAAAATATGTTTTTGTTATGTCTGTAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL37-RB | 1464 | mRpL37-RB | 129..1464 | 1..1336 | 6680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 6608083..6608550 | 1336..869 | 2250 | 98.7 | Minus |
chr3R | 27901430 | chr3R | 6608944..6609291 | 587..240 | 1740 | 100 | Minus |
chr3R | 27901430 | chr3R | 6608606..6608890 | 868..584 | 1395 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 6609354..6609592 | 239..1 | 1180 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10782562..10783030 | 1337..869 | 2345 | 100 | Minus |
3R | 32079331 | 3R | 10783424..10783771 | 587..240 | 1740 | 100 | Minus |
3R | 32079331 | 3R | 10783086..10783370 | 868..584 | 1410 | 99.6 | Minus |
3R | 32079331 | 3R | 10783834..10784072 | 239..1 | 1195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10523393..10523861 | 1337..869 | 2345 | 100 | Minus |
3R | 31820162 | 3R | 10524255..10524602 | 587..240 | 1740 | 100 | Minus |
3R | 31820162 | 3R | 10523917..10524201 | 868..584 | 1410 | 99.6 | Minus |
3R | 31820162 | 3R | 10524665..10524903 | 239..1 | 1195 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 6608083..6608550 | 869..1336 | 98 | <- | Minus |
chr3R | 6608606..6608886 | 588..868 | 99 | <- | Minus |
chr3R | 6608944..6609291 | 240..587 | 100 | <- | Minus |
chr3R | 6609354..6609592 | 1..239 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RA | 1..1131 | 64..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RB | 1..1227 | 64..1290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RB | 1..1227 | 64..1290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RA | 1..1131 | 64..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RB | 1..1227 | 64..1290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RA | 63..1256 | 1..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RB | 1..1336 | 1..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RB | 21..1356 | 1..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RA | 63..1256 | 1..1194 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpL37-RB | 21..1356 | 1..1336 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10783834..10784072 | 1..239 | 100 | Minus | |
3R | 10782563..10783030 | 869..1336 | 100 | <- | Minus |
3R | 10783086..10783366 | 588..868 | 100 | <- | Minus |
3R | 10783424..10783771 | 240..587 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10783834..10784072 | 1..239 | 100 | Minus | |
3R | 10782563..10783030 | 869..1336 | 100 | <- | Minus |
3R | 10783086..10783366 | 588..868 | 100 | <- | Minus |
3R | 10783424..10783771 | 240..587 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10783834..10784072 | 1..239 | 100 | Minus | |
3R | 10782563..10783030 | 869..1336 | 100 | <- | Minus |
3R | 10783086..10783366 | 588..868 | 100 | <- | Minus |
3R | 10783424..10783771 | 240..587 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 6608285..6608752 | 869..1336 | 100 | <- | Minus |
arm_3R | 6608808..6609088 | 588..868 | 100 | <- | Minus |
arm_3R | 6609146..6609493 | 240..587 | 100 | <- | Minus |
arm_3R | 6609556..6609794 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10523394..10523861 | 869..1336 | 100 | <- | Minus |
3R | 10523917..10524197 | 588..868 | 100 | <- | Minus |
3R | 10524255..10524602 | 240..587 | 100 | <- | Minus |
3R | 10524665..10524903 | 1..239 | 100 | Minus |
Translation from 63 to 1289
> LD25118.pep MRLTNTLCAQHIGWHFKKHWLVQGRRVPKETGAAAELLKLGVLVKNPEDL LNAKVEKKLVDIVGAREKPVPEDSRHPDWHPTVCNTYSDNSVLIGGLPQA QVLTNSIVIQTFPKHIEDAIASQQLPNSVDKSVRHAILASHVLDAEQVKL PKVRLPERPAFNLPRSYGISHERVNRLLVNKLLHESEKLAGRSVSVRRKL IDNASFKTFLSKDGDLLGFSINAEKVVFANRAIEGVKGKFEGDLPDLYPM KSTISIPKYHIYQAKNLYPLRSDITCSHPHTIFTVFNKHQVKNSHGSEVT TSQLQARTLVKAFVVAAARAKQLHGDSVGALPKPIVVQSVQTDGRTFHFG VLQLNTLDLGANSTAKNYWFHRQNYNLFAECSYEGGRTHLDNYNGEVFRI FNAFYNNS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17089-PA | 762 | GF17089-PA | 1..388 | 1..387 | 1597 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17265-PA | 741 | GG17265-PA | 1..370 | 1..369 | 1821 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19566-PA | 723 | GH19566-PA | 1..381 | 1..380 | 1333 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL37-PB | 408 | CG42632-PB | 1..408 | 1..408 | 2129 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23861-PA | 725 | GI23861-PA | 1..397 | 1..392 | 1275 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21931-PA | 747 | GL21931-PA | 1..377 | 1..378 | 1384 | 66.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30165-PA | 407 | GA30165-PA | 1..407 | 1..408 | 1489 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26149-PA | 749 | GM26149-PA | 1..378 | 1..377 | 1923 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20703-PA | 749 | GD20703-PA | 1..378 | 1..377 | 1937 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10574-PA | 718 | GJ10574-PA | 1..382 | 1..382 | 1302 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13392-PA | 740 | GK13392-PA | 1..369 | 1..368 | 1389 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24667-PA | 752 | GE24667-PA | 1..382 | 1..381 | 1875 | 91.6 | Plus |
Translation from 63 to 1289
> LD25118.hyp MRLTNTLCAQHIGWHFKKHWLVQGRRVPKETGAAAELLKLGVLVKNPEDL LNAKVEKKLVDIVGAREKPVPEDSRHPDWHPTVCNTYSDNSVLIGGLPQA QVLTNSIVIQTFPKHIEDAIASQQLPNSVDKSVRHAILASHVLDAEQVKL PKVRLPERPAFNLPRSYGISHERVNRLLVNKLLHESEKLAGRSVSVRRKL IDNASFKTFLSKDGDLLGFSINAEKVVFANRAIEGVKGKFEGDLPDLYPM KSTISIPKYHIYQAKNLYPLRSDITCSHPHTIFTVFNKHQVKNSHGSEVT TSQLQARTLVKAFVVAAARAKQLHGDSVGALPKPIVVQSVQTDGRTFHFG VLQLNTLDLGANSTAKNYWFHRQNYNLFAECSYEGGRTHLDNYNGEVFRI FNAFYNNS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpL37-PB | 408 | CG42632-PB | 1..408 | 1..408 | 2129 | 100 | Plus |