BDGP Sequence Production Resources |
Search the DGRC for LD25271
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 252 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6617-RA |
Protein status: | LD25271.pep: gold |
Preliminary Size: | 1075 |
Sequenced Size: | 980 |
Gene | Date | Evidence |
---|---|---|
CG6617 | 2001-01-01 | Release 2 assignment |
CG6617 | 2002-04-04 | Blastp of sequenced clone |
CG6617 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6617 | 2008-04-29 | Release 5.5 accounting |
CG6617 | 2008-08-15 | Release 5.9 accounting |
CG6617 | 2008-12-18 | 5.12 accounting |
980 bp (980 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095034
> LD25271.complete TTTGTGCATTGCAAGTTAGTAAACAATAAAAGCGCATAAACAGGGCTAGG AAAAGCGGGAAGACGATTAGGTAAACAGAATTCGACGCAAATCGGTTGGA AAAACGGCCTCAAGATTGGCAAGATACGCAAGAGCAAGAAAATGAGCTAC AACGAGAAATCGGAGGCCATCATCAAGGAGGAGTGGCTGCAGCGCCTGGA GCAGTTTCCCTTCAAGCAGGCGGACATGAATCGCCTGATCATGAACTACT TGGTCACAGAGGGCTTCAAGGAGGCCGCCGAGAAGTTCCAGCACGAGGCG GATCTGGAGCCCAGCGTGGAGCTGAGCAGCCTCGATGGGCGCATACTCAT CCGCGAAGCCGTGCAGGCGGGCCGCATCGAGGAGGCCACCCAGCTGGTGA ACCAGCTGCATCCTGAGCTGCTCGGCAGCGATCGCTATCTGTTCTTCCAC CTGCAGCAGCTGCAGCTCATCGAGCTGATACGCGCCGGCAAGGTGGAGGA GGCCCTGTCCTTTGCCCAAAGCAAGCTGTCCGAGTCCGGCGAGGAGGCCA TGTTTGAGCTGGAGCGCACCCTGGCCCTGCTCGCCTTCGAGAAGCCGCAG GAGAGCCCCTTCGCCGACCTGCTGGAGCAGTCGTACCGCCAGAAGATCGC TAGCGAGCTCAACTCGGCCATCCTGCGCTGCGAGCAGAGCGAGGACTCCA CGCCCAAAATGATGTTCCTGCTCAAGCTGATCTTGTGGGCCCAGTCCAAG CTGGACAGCCGCTCCATTAGCTATCCCAAGATGAAGAACCTAGAGACGGC GCACCTGGAGCCCAAGTAGAAGGGCAGCGCCACCCCCTTCGACTTCTTTT GCTAATGCTATTGCTAATATATCTCCATTTAATAAGTATGTATATGTATG TATGCTGGATGTAGGCAGTGAATTATTAAATAAGTAGCCGGAAACTCCAT CACTCCAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6617-RA | 1137 | CG6617-RA | 141..1097 | 1..957 | 4785 | 100 | Plus |
CG6540-RA | 1301 | CG6540-RA | 1161..1301 | 957..817 | 705 | 100 | Minus |
CG18467-RA | 1185 | CG18467-RA | 325..388 | 216..279 | 155 | 82.8 | Plus |
CG18467-RA | 1185 | CG18467-RA | 844..891 | 708..755 | 150 | 87.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18538563..18539259 | 260..956 | 100 | <- | Minus |
chrX | 18539320..18539578 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 1..678 | 142..819 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 1..678 | 142..819 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 1..678 | 142..819 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 1..678 | 142..819 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 1..678 | 142..819 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 30..985 | 1..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 36..991 | 1..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 34..989 | 1..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 30..985 | 1..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6617-RA | 34..989 | 1..956 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18649396..18650092 | 260..956 | 100 | <- | Minus |
X | 18650153..18650411 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18649396..18650092 | 260..956 | 100 | <- | Minus |
X | 18650153..18650411 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18649396..18650092 | 260..956 | 100 | <- | Minus |
X | 18650153..18650411 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18543429..18544125 | 260..956 | 100 | <- | Minus |
arm_X | 18544186..18544444 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18657494..18658190 | 260..956 | 100 | <- | Minus |
X | 18658251..18658509 | 1..259 | 100 | Minus |
Translation from 141 to 818
> LD25271.hyp MSYNEKSEAIIKEEWLQRLEQFPFKQADMNRLIMNYLVTEGFKEAAEKFQ HEADLEPSVELSSLDGRILIREAVQAGRIEEATQLVNQLHPELLGSDRYL FFHLQQLQLIELIRAGKVEEALSFAQSKLSESGEEAMFELERTLALLAFE KPQESPFADLLEQSYRQKIASELNSAILRCEQSEDSTPKMMFLLKLILWA QSKLDSRSISYPKMKNLETAHLEPK*
Translation from 141 to 818
> LD25271.pep MSYNEKSEAIIKEEWLQRLEQFPFKQADMNRLIMNYLVTEGFKEAAEKFQ HEADLEPSVELSSLDGRILIREAVQAGRIEEATQLVNQLHPELLGSDRYL FFHLQQLQLIELIRAGKVEEALSFAQSKLSESGEEAMFELERTLALLAFE KPQESPFADLLEQSYRQKIASELNSAILRCEQSEDSTPKMMFLLKLILWA QSKLDSRSISYPKMKNLETAHLEPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22403-PA | 225 | GF22403-PA | 1..225 | 1..225 | 1108 | 95.1 | Plus |
Dana\GF13121-PA | 197 | GF13121-PA | 10..165 | 15..205 | 293 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18105-PA | 225 | GG18105-PA | 1..225 | 1..225 | 1143 | 98.7 | Plus |
Dere\GG20679-PA | 237 | GG20679-PA | 10..223 | 15..221 | 528 | 45.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12808-PA | 225 | GH12808-PA | 1..225 | 1..225 | 1047 | 91.6 | Plus |
Dgri\GH21398-PA | 216 | GH21398-PA | 1..193 | 1..210 | 313 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6617-PA | 225 | CG6617-PA | 1..225 | 1..225 | 1119 | 100 | Plus |
CG18467-PA | 237 | CG18467-PA | 10..209 | 15..205 | 504 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15079-PA | 225 | GI15079-PA | 1..225 | 1..225 | 1061 | 92 | Plus |
Dmoj\GI18577-PA | 202 | GI18577-PA | 10..173 | 15..205 | 273 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27019-PA | 225 | GL27019-PA | 1..225 | 1..225 | 1120 | 95.6 | Plus |
Dper\GL11425-PA | 231 | GL11425-PA | 10..221 | 15..223 | 586 | 53.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19727-PA | 225 | GA19727-PA | 1..225 | 1..225 | 1120 | 95.6 | Plus |
Dpse\GA14944-PA | 231 | GA14944-PA | 10..221 | 15..223 | 586 | 53.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22795-PA | 225 | GM22795-PA | 1..225 | 1..225 | 1160 | 100 | Plus |
Dsec\GM21774-PA | 237 | GM21774-PA | 10..214 | 15..210 | 524 | 46.3 | Plus |
Dsec\GM23079-PA | 237 | GM23079-PA | 10..214 | 15..210 | 524 | 46.3 | Plus |
Dsec\GM16180-PA | 217 | GM16180-PA | 10..194 | 15..210 | 482 | 43.1 | Plus |
Dsec\GM10398-PA | 182 | GM10398-PA | 1..159 | 61..210 | 384 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24473-PA | 225 | GD24473-PA | 1..225 | 1..225 | 1160 | 100 | Plus |
Dsim\GD11267-PA | 237 | GD11267-PA | 10..214 | 15..210 | 528 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18886-PA | 225 | GJ18886-PA | 1..225 | 1..225 | 1078 | 93.3 | Plus |
Dvir\GJ20371-PA | 211 | GJ20371-PA | 11..201 | 15..223 | 351 | 38.8 | Plus |