BDGP Sequence Production Resources |
Search the DGRC for LD25288
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 252 |
Well: | 88 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10880-RA |
Protein status: | LD25288.pep: gold |
Preliminary Size: | 1448 |
Sequenced Size: | 1294 |
Gene | Date | Evidence |
---|---|---|
CG10880 | 2001-01-01 | Release 2 assignment |
CG10880 | 2001-09-19 | Blastp of sequenced clone |
CG10880 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10880 | 2008-04-29 | Release 5.5 accounting |
CG10880 | 2008-08-15 | Release 5.9 accounting |
CG10880 | 2008-12-18 | 5.12 accounting |
1294 bp (1294 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058565
> LD25288.complete CCGATTCTTAACAGCGAATCTAATCTAAGCGCAATTGCATTTTAATGGTA ATTTAATTGCCATTATTGACAGAGTTTATGGCAACGAAGACGCACACAAT GTCCGCGGGGGATGTCCCCTTGGTGGCGATGGCCAAGGTTCCGCCGACCA TTCAGTTTGAGGCCACAAAGAACTTTCACTCGCACACCGAGCAGAAGGAA TTGGACAGTGCTTTCCTGGGCTACAATCGACGTCCTTGGGTTCGCCAAAA GGCTCACAGGGACACACGCCGGGAGAGGGAGATCCTCAACGGTCTACTGT GCTCTACCAGCGTGGAAACGGACTACGCCAGCACCTGTGTGGACAAACTT ATTGCCGAGAACATTAACTATCTGGATTTGGCCTCTCTCACCGACGAAGA TTTGGAACTCTTCGGGTTCAAGTGTCGAAAGCAACGGCAACAGCTCCTGG AGATGTTCGAAAAGATTCCCAACCAGAATCCCAGTTACGAATACATTTGC AACCATCCTGAAGCCGAAAACTACAACAATCAGATTCTGGGCAATGCTGG CAACCACTTTATGTCCCTGCGCGCTTCTTTAGCGGCCACCAACTACAAGC TGCAGGTCTCCACTCCCGAGGACGTCGTGGTGGGCGACAAACGATATGCC AGCTGCTTTGCCCAGGAAACTCTAAAAAGCGTGAATCAGATCACCGAAGA GATTGCCAAGGATCTCGCGAAAATCGAAGCTAATGCCCAGAACGCAAGGA GCCAGAAGAAAGTGCAGGGCAACGAGAGTCACAAGAAGAAGAAGTGGAGC CTGGCTACTATTTTGTATTACACCACCTTGGCTGTGGGATTTTCGTGCGC CTGGTTCTGGTGGTGGACCAAGTTCCGCAGCGCTCCCCGACTGGAGCGGA TCTCCGTTCAGACTTAAAAAAAACGCACAACGATGCATTTAATAGTTACA TTCCGATTTTCTCATAGGACCTAAGTTTATAGAATTTACTTATTACTTCT TTAAGCATTCGCTTAATCTAAAGCTGTAATGAAGTTTTACTGCCCAACAT GAACATTTGATAGAAACCATATGTTGTATTAAGTTGAAAAATTGTTTAAT TTATTGCCTTAAACTGACTTCTTCGGCAAGGAGAAGAAACCCCAGATGGA CATAGGAGTCCACGTGCTCGGGAAATTCCCATAAAGTTGTGTGCGCAATG AGCTGGCTTCTTTCAGTCGAGTGAGCAATGTTACCTATAAGAAAAGTAAC ATGATTATATTTAAGATGGTAAATCGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 415..461 | 1071..1115 | 112 | 76.6 | Plus |
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 3195..3241 | 1071..1115 | 112 | 76.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2214701..2215188 | 789..1276 | 98 | <- | Minus |
chr2L | 2215244..2216031 | 1..788 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 1..840 | 78..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 1..840 | 78..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 1..840 | 78..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 1..840 | 78..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 1..840 | 78..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 1..1272 | 5..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 3..1278 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 10..1285 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 1..1272 | 5..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10880-RA | 10..1285 | 1..1276 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2214972..2215459 | 789..1276 | 100 | <- | Minus |
2L | 2215515..2216302 | 1..788 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2214972..2215459 | 789..1276 | 100 | <- | Minus |
2L | 2215515..2216302 | 1..788 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2214972..2215459 | 789..1276 | 100 | <- | Minus |
2L | 2215515..2216302 | 1..788 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2214972..2215459 | 789..1276 | 100 | <- | Minus |
arm_2L | 2215515..2216302 | 1..788 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2215515..2216302 | 1..788 | 100 | Minus | |
2L | 2214972..2215459 | 789..1276 | 100 | <- | Minus |
Translation from 77 to 916
> LD25288.hyp MATKTHTMSAGDVPLVAMAKVPPTIQFEATKNFHSHTEQKELDSAFLGYN RRPWVRQKAHRDTRREREILNGLLCSTSVETDYASTCVDKLIAENINYLD LASLTDEDLELFGFKCRKQRQQLLEMFEKIPNQNPSYEYICNHPEAENYN NQILGNAGNHFMSLRASLAATNYKLQVSTPEDVVVGDKRYASCFAQETLK SVNQITEEIAKDLAKIEANAQNARSQKKVQGNESHKKKKWSLATILYYTT LAVGFSCAWFWWWTKFRSAPRLERISVQT*
Translation from 77 to 916
> LD25288.pep MATKTHTMSAGDVPLVAMAKVPPTIQFEATKNFHSHTEQKELDSAFLGYN RRPWVRQKAHRDTRREREILNGLLCSTSVETDYASTCVDKLIAENINYLD LASLTDEDLELFGFKCRKQRQQLLEMFEKIPNQNPSYEYICNHPEAENYN NQILGNAGNHFMSLRASLAATNYKLQVSTPEDVVVGDKRYASCFAQETLK SVNQITEEIAKDLAKIEANAQNARSQKKVQGNESHKKKKWSLATILYYTT LAVGFSCAWFWWWTKFRSAPRLERISVQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15298-PA | 270 | GF15298-PA | 1..270 | 8..279 | 922 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24547-PA | 278 | GG24547-PA | 1..266 | 8..273 | 1232 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11469-PA | 264 | GH11469-PA | 1..263 | 8..278 | 581 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10880-PA | 279 | CG10880-PA | 1..279 | 1..279 | 1468 | 100 | Plus |
CG10880-PB | 278 | CG10880-PB | 1..278 | 1..279 | 1451 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16918-PA | 269 | GI16918-PA | 1..268 | 8..278 | 688 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19415-PA | 259 | GL19415-PA | 6..259 | 13..279 | 611 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10615-PA | 259 | GA10615-PA | 6..259 | 13..279 | 617 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18255-PA | 272 | GM18255-PA | 1..272 | 8..279 | 1395 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22864-PA | 272 | GD22864-PA | 1..272 | 8..279 | 1406 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17210-PA | 261 | GJ17210-PA | 1..260 | 8..278 | 771 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15142-PA | 265 | GK15142-PA | 12..257 | 21..271 | 547 | 44.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15198-PA | 272 | GE15198-PA | 1..272 | 8..279 | 1317 | 88.2 | Plus |