BDGP Sequence Production Resources |
Search the DGRC for LD25351
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 253 |
Well: | 51 |
Vector: | pOT2 |
Associated Gene/Transcript | Papss-RA |
Protein status: | LD25351.pep: gold |
Preliminary Size: | 2368 |
Sequenced Size: | 2400 |
Gene | Date | Evidence |
---|---|---|
CG8363 | 2001-01-01 | Release 2 assignment |
CG8363 | 2001-07-04 | Blastp of sequenced clone |
CG8363 | 2003-01-01 | Sim4 clustering to Release 3 |
Paps | 2008-04-29 | Release 5.5 accounting |
Papss | 2008-08-15 | Release 5.9 accounting |
Papss | 2008-12-18 | 5.12 accounting |
2400 bp (2400 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051724
> LD25351.complete CGTATCCCAAATTTAAACGTTTGCTTGCGATATAACTAGACTTTAAGCTA TTTAGTGCAATAGTCCAGCTGCTGCGAGTGCTACACCTATTTGGAAAACA TTTTGTTTGGAATTGCTTGGCAGGAGGACGTGCTACTTTGGTGGGTCATA ATAGGCGAGCACAGTTCCCCTCGAGAAATGAGTGAAGTTCCGGAGAGCAG CAAAAAGCGTCAAAAGACGTGCCTACAGGTGGCGACGAATGTGACCGAGC AAAAGCACCATGTCACCAGGGAGACGCGCGGCAAGAATTTGGGACTCTGT CGAGGATTCCGAGGATGCACGGTGTGGCTGACTGGCCTCAGTGGAGCTGG AAAGACCTCGATTGCCTTCGAACTGGAGGCGTACCTGGTATCCCGGGGCA TTCCGGCCTACGGGTTGGACGGCGACAACATTCGCACCGGACTGAACAAG AACCTGGGCTTCACGCCCGCCGATCGCGAGGAAAACATTCGCCGCGTGGG CGAGGTGGCCAAGTTGTTTGCCGACAGCGGAGTGGTGGCCATCTGCAGCT TCGTTTCGCCCTTCGCCGACGATCGTGAGATGGCGCGCAAGATCCACAAG GATGCGGGTCTGAAGTTCTATGAGATATTCGTGGACACACCGCTGGATGT GTGCGAAACCCGGGACGTGAAGGGTCTATACAAGAAGGCGCGCGAGGGCG TAATCAAAGGATTCACGGGCATTACGCAGGAGTACGAGCGACCCCAGATG CCGGAGCTGGTGGTCAACACGCACGGCTACACGGTGCGCGAGTCCACTCA GAAGCTGGTGACGCTGCTCGAACAGGAGGGCATTATTCCGCGCTCGCTGC GCGACGTAGACCTGCTGCCGGAGCTTTATCCCAGCGAATCCATTGCCACG GAGGCACTGCGTCACGAGGCCGAGTCGCTGCAAGCCATCGAAATCAGCAC CGTGGAGCTGCAGTGGGTGCAAGTACTGGCCGAGGGATGGGCATATCCAC TGCGCGGCTTCATGCGCGAGGATGAGTACCTGCAGACGCTGCACTTCAAC ACACTTCAGAGCGGCATGGACGGTTCCTATCGCGAGAACCACTCGGTGCC CATTGTTTTGAGCGCCACGCAGGCGGACAAGGATCGTCTGGACGGCTGCT CCTCGCTGACTCTCAAATACCAAGGCAAGGCGGTAGCCATTCTGCGGCGT CCCGAGTTCTACTTTCAGCGTAAGGAGGAGCGGCTGGCCCGCCAGTTCGG CACCAGCAATCCCAATCACCCGTACAGTAAGCAGGTCTACGAGTCCGGGG ATTATTTGGTCGGTGGCGATCTGGCAGTGATCGAACGTATCCGCTGGGAG GACGGACTGGATCAGTACAGGCTGACTCCCAACGAGTTAAGGCGCCGCTT TAAGGAGCTGAATGCCGACGCCATCTTCGCCTTTCAGTTGCGCAATCCCA TCCACAACGGCCATGCCCTGCTCATGCAAGACACTCGCCGCCAGCTGCTG GAGCGCGGCTTCAAGCAGCCAGTGCTGCTGCTGCATCCTCTGGGTGGCTG GACCAAGGACGACGATGTGCCGCTGGATGTGCGCATGAAGCAGCACCAGG CCGTGCTCGACGCAGGTGTCTTGCGACGAGAGGACACAGTGCTGGCCATC TTCCCCTCGCCAATGATGTACGCCGGTCCCACGGAGGTGCAGTGGCACGC AAAGGCGCGCATGAACGCCGGTGCGAACTTCTACATTGTAGGCCGTGATC CGGCTGGCATGCCGCATCCGGCCAAGGAAACTTATCCGGATGGAAACCTA TACGATGCCACCCATGGTGCGCGAGTGCTTAAGATGGCCCAGGGACTAGA CAGCATGGAGATCCTGCCCTTCCGTGTTGCTGCCTATGACAAGAGCGCCA GTAGAATGGCCTTCTTCGAGCCCAAGAGGAAGGATGAGTTTGAGTTCATC TCGGGAACCAAGATGCGCACCCTGGCCAAAACGGGAGCCAGTCCGCCGGA TGGCTTCATGGAACCGGAGGCTTGGCGCATCCTGGCCACCTACTACCAGA ACCTGCCGCAGTCGTAACCCGCTGCTCACACTCGATCCGCAACGTGCAAT TCCTCCTAGTTATAGCTCGTGTGCTTATTATACATAAATATTTCAAGCTA AAGGCGCTTACCACTTACCACATCTTTTTTCCATTGTTCTAAGCCGAAAT CCGTGGCTGTCCCCGTGTGTGAATGTTGTGCTCCTCCTAACTAAATGTTC GTATCGTACAATCTACTTGTATCTACACTTAAGTCACCCAATTCTTTTTA TCTTAAGCAAAATATCGTGCAGCTATTTTGTGGACGGTTTTTAATACATA TATAAATAATAAAATAGAAAATTACTTATTGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Papss-RA | 2495 | Papss-RA | 111..2493 | 1..2383 | 11915 | 100 | Plus |
Papss.b | 2658 | Papss.b | 495..2658 | 219..2382 | 10820 | 100 | Plus |
Papss.c | 2643 | Papss.c | 480..2643 | 219..2382 | 10820 | 100 | Plus |
Papss.c | 2643 | Papss.c | 33..252 | 1..220 | 1100 | 100 | Plus |
Papss.b | 2658 | Papss.b | 148..267 | 101..220 | 600 | 100 | Plus |
Papss.b | 2658 | Papss.b | 33..133 | 1..101 | 505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19848178..19849704 | 334..1860 | 7590 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 19849765..19850287 | 1859..2381 | 2615 | 100 | Plus |
chr3L | 24539361 | chr3L | 19834875..19834993 | 101..219 | 595 | 100 | Plus |
chr3L | 24539361 | chr3L | 19847741..19847857 | 219..335 | 585 | 100 | Plus |
chr3L | 24539361 | chr3L | 19834692..19834791 | 1..100 | 500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19858814..19860340 | 334..1860 | 7635 | 100 | Plus |
3L | 28110227 | 3L | 19860403..19860927 | 1859..2383 | 2625 | 100 | Plus |
3L | 28110227 | 3L | 19845512..19845630 | 101..219 | 595 | 100 | Plus |
3L | 28110227 | 3L | 19858377..19858493 | 219..335 | 585 | 100 | Plus |
3L | 28110227 | 3L | 19845329..19845428 | 1..100 | 500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19851914..19853440 | 334..1860 | 7635 | 100 | Plus |
3L | 28103327 | 3L | 19853503..19854027 | 1859..2383 | 2625 | 100 | Plus |
3L | 28103327 | 3L | 19838612..19838730 | 101..219 | 595 | 100 | Plus |
3L | 28103327 | 3L | 19851477..19851593 | 219..335 | 585 | 100 | Plus |
3L | 28103327 | 3L | 19838429..19838528 | 1..100 | 500 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19834692..19834791 | 1..100 | 100 | -> | Plus |
chr3L | 19834875..19834993 | 101..219 | 100 | -> | Plus |
chr3L | 19847742..19847856 | 220..334 | 100 | -> | Plus |
chr3L | 19848179..19849704 | 335..1860 | 99 | -> | Plus |
chr3L | 19849767..19850242 | 1861..2336 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RB | 1..1890 | 178..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RB | 1..1890 | 178..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RA | 1..1890 | 178..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RB | 1..1890 | 178..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RA | 1..1890 | 178..2067 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RA | 33..2413 | 1..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RA | 33..2413 | 1..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RA | 37..2417 | 1..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RA | 33..2413 | 1..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Papss-RA | 37..2417 | 1..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19845329..19845428 | 1..100 | 100 | -> | Plus |
3L | 19845512..19845630 | 101..219 | 100 | -> | Plus |
3L | 19858378..19858492 | 220..334 | 100 | -> | Plus |
3L | 19858815..19860340 | 335..1860 | 100 | -> | Plus |
3L | 19860405..19860925 | 1861..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19845329..19845428 | 1..100 | 100 | -> | Plus |
3L | 19845512..19845630 | 101..219 | 100 | -> | Plus |
3L | 19858378..19858492 | 220..334 | 100 | -> | Plus |
3L | 19858815..19860340 | 335..1860 | 100 | -> | Plus |
3L | 19860405..19860925 | 1861..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19845329..19845428 | 1..100 | 100 | -> | Plus |
3L | 19845512..19845630 | 101..219 | 100 | -> | Plus |
3L | 19858378..19858492 | 220..334 | 100 | -> | Plus |
3L | 19858815..19860340 | 335..1860 | 100 | -> | Plus |
3L | 19860405..19860925 | 1861..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19838429..19838528 | 1..100 | 100 | -> | Plus |
arm_3L | 19838612..19838730 | 101..219 | 100 | -> | Plus |
arm_3L | 19851478..19851592 | 220..334 | 100 | -> | Plus |
arm_3L | 19851915..19853440 | 335..1860 | 100 | -> | Plus |
arm_3L | 19853505..19854025 | 1861..2381 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19838429..19838528 | 1..100 | 100 | -> | Plus |
3L | 19838612..19838730 | 101..219 | 100 | -> | Plus |
3L | 19851478..19851592 | 220..334 | 100 | -> | Plus |
3L | 19851915..19853440 | 335..1860 | 100 | -> | Plus |
3L | 19853505..19854025 | 1861..2381 | 100 | Plus |
Translation from 177 to 2066
> LD25351.pep MSEVPESSKKRQKTCLQVATNVTEQKHHVTRETRGKNLGLCRGFRGCTVW LTGLSGAGKTSIAFELEAYLVSRGIPAYGLDGDNIRTGLNKNLGFTPADR EENIRRVGEVAKLFADSGVVAICSFVSPFADDREMARKIHKDAGLKFYEI FVDTPLDVCETRDVKGLYKKAREGVIKGFTGITQEYERPQMPELVVNTHG YTVRESTQKLVTLLEQEGIIPRSLRDVDLLPELYPSESIATEALRHEAES LQAIEISTVELQWVQVLAEGWAYPLRGFMREDEYLQTLHFNTLQSGMDGS YRENHSVPIVLSATQADKDRLDGCSSLTLKYQGKAVAILRRPEFYFQRKE ERLARQFGTSNPNHPYSKQVYESGDYLVGGDLAVIERIRWEDGLDQYRLT PNELRRRFKELNADAIFAFQLRNPIHNGHALLMQDTRRQLLERGFKQPVL LLHPLGGWTKDDDVPLDVRMKQHQAVLDAGVLRREDTVLAIFPSPMMYAG PTEVQWHAKARMNAGANFYIVGRDPAGMPHPAKETYPDGNLYDATHGARV LKMAQGLDSMEILPFRVAAYDKSASRMAFFEPKRKDEFEFISGTKMRTLA KTGASPPDGFMEPEAWRILATYYQNLPQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23598-PA | 629 | GF23598-PA | 1..629 | 1..629 | 3291 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16064-PA | 629 | GG16064-PA | 1..628 | 1..628 | 3352 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14663-PA | 629 | GH14663-PA | 1..629 | 1..629 | 3121 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Papss-PG | 629 | CG8363-PG | 1..629 | 1..629 | 3289 | 100 | Plus |
Papss-PB | 629 | CG8363-PB | 1..629 | 1..629 | 3289 | 100 | Plus |
Papss-PA | 629 | CG8363-PA | 1..629 | 1..629 | 3289 | 100 | Plus |
Papss-PC | 629 | CG8363-PC | 1..629 | 1..629 | 3289 | 100 | Plus |
Papss-PD | 657 | CG8363-PD | 35..657 | 7..629 | 3228 | 99 | Plus |
Papss-PH | 630 | CG8363-PH | 13..630 | 12..629 | 3223 | 99.5 | Plus |
Papss-PF | 630 | CG8363-PF | 13..630 | 12..629 | 3223 | 99.5 | Plus |
Papss-PE | 630 | CG8363-PE | 13..630 | 12..629 | 3223 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11647-PA | 629 | GI11647-PA | 1..629 | 1..629 | 3120 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15741-PA | 625 | GL15741-PA | 1..625 | 1..629 | 3111 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21020-PA | 629 | GA21020-PA | 1..629 | 1..629 | 3187 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19669-PA | 533 | GM19669-PA | 94..487 | 16..409 | 2096 | 99.5 | Plus |
Dsec\GM19674-PA | 77 | GM19674-PA | 1..77 | 553..629 | 410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14833-PA | 595 | GD14833-PA | 1..595 | 1..629 | 3145 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11328-PA | 630 | GJ11328-PA | 13..630 | 12..629 | 3064 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16974-PA | 658 | GK16974-PA | 39..658 | 10..629 | 3135 | 92.6 | Plus |
Translation from 177 to 2066
> LD25351.hyp MSEVPESSKKRQKTCLQVATNVTEQKHHVTRETRGKNLGLCRGFRGCTVW LTGLSGAGKTSIAFELEAYLVSRGIPAYGLDGDNIRTGLNKNLGFTPADR EENIRRVGEVAKLFADSGVVAICSFVSPFADDREMARKIHKDAGLKFYEI FVDTPLDVCETRDVKGLYKKAREGVIKGFTGITQEYERPQMPELVVNTHG YTVRESTQKLVTLLEQEGIIPRSLRDVDLLPELYPSESIATEALRHEAES LQAIEISTVELQWVQVLAEGWAYPLRGFMREDEYLQTLHFNTLQSGMDGS YRENHSVPIVLSATQADKDRLDGCSSLTLKYQGKAVAILRRPEFYFQRKE ERLARQFGTSNPNHPYSKQVYESGDYLVGGDLAVIERIRWEDGLDQYRLT PNELRRRFKELNADAIFAFQLRNPIHNGHALLMQDTRRQLLERGFKQPVL LLHPLGGWTKDDDVPLDVRMKQHQAVLDAGVLRREDTVLAIFPSPMMYAG PTEVQWHAKARMNAGANFYIVGRDPAGMPHPAKETYPDGNLYDATHGARV LKMAQGLDSMEILPFRVAAYDKSASRMAFFEPKRKDEFEFISGTKMRTLA KTGASPPDGFMEPEAWRILATYYQNLPQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Papss-PG | 629 | CG8363-PG | 1..629 | 1..629 | 3289 | 100 | Plus |
Papss-PB | 629 | CG8363-PB | 1..629 | 1..629 | 3289 | 100 | Plus |
Papss-PA | 629 | CG8363-PA | 1..629 | 1..629 | 3289 | 100 | Plus |
Papss-PC | 629 | CG8363-PC | 1..629 | 1..629 | 3289 | 100 | Plus |
Papss-PD | 657 | CG8363-PD | 35..657 | 7..629 | 3228 | 99 | Plus |