BDGP Sequence Production Resources |
Search the DGRC for LD25561
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 255 |
Well: | 61 |
Vector: | pOT2 |
Associated Gene/Transcript | NDUFS3-RA |
Protein status: | LD25561.pep: gold |
Preliminary Size: | 1074 |
Sequenced Size: | 950 |
Gene | Date | Evidence |
---|---|---|
CG12079 | 2001-01-01 | Release 2 assignment |
CG12079 | 2002-05-15 | Blastp of sequenced clone |
CG12079 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12079 | 2008-04-29 | Release 5.5 accounting |
CG12079 | 2008-08-15 | Release 5.9 accounting |
CG12079 | 2008-12-18 | 5.12 accounting |
950 bp (950 high quality bases) assembled on 2002-05-15
GenBank Submission: AY118532
> LD25561.complete ACATTTTAGCATTACACATTGTCAAAAACGGAGCAAATTGTTGAATTTAT ATTGAACAGTTTGTAGAATGGCGGCCTTAATCAGGAATCTGGGTGCCCGT GCCGCAGTCGCCGCTCTGTCGGCCAAACATGTGGTGCCCGCTGCTGGATC CACTGCTCTTCGGATGGCCAGTACAACGCCAGTGGAGCCTAAGAAGGCGG ATAAGCCCACTGTCCGCCAGCCGGACGCAGTCGCTCGCTCGCATCTCTCC GATTTCGGGCGCTATGTGGCCGAGTGCCTGCCCAAGTACGTGCAGAAGGT GCAGCTGACCGCCGGCGATGAGCTGGAGGTGCTTATTGCGCCAGAGGGCG TGGTGCCCGTGCTGCAGTTCCTTAAGGATCATCATCAGGCGCAGTTTACC AACCTGGTTGACATTGCCGGCGTGGATGTGCCCTGTCGCAAGAACCGATT CGAGGTGGTCTACAATTTGCTCTCGCTGCGCTACAATTCGCGCATCCGCG TTAAGACCTACACCGATGAGCTGACTCCTCTGGACTCCGCCTGCGAGGTG CATAAGGCGGCCAACTGGTACGAACGTGAGATCTGGGACATGTACGGCGT GTTCTTTGCCAACCATCCCGACTTGCGCCGCATCCTGACCGATTACGGTT TTGAGGGACATCCCCAGCGCCGCGACTTCCCGCTGTCCGGCTACGTAGAG CTGCGCTACGATGATGAGAAGAAGCGAGTCGTCTGCGAGCCCTTGGAGTT GGCCCAGGAGTTCAGGAAGTTTGACTTGTCGGCGCCTTGGGAACAGTTCC CCAACTTCCGCAACGCTAATCCCCCCGCCGAGGTAGTTCCGCCACAGGCT CCAGCCAAGAAGTAATCCGAAGTCGGTTTGTTAAATGGTAATTAGATCAA TAAAACGTGATCACTATGAGATGTTTAAACATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3157937..3158662 | 932..207 | 3615 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 3158856..3158988 | 131..1 | 585 | 97.7 | Minus |
chr3L | 24539361 | chr3L | 3158721..3158796 | 206..131 | 380 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3158721..3158795 | 132..206 | 100 | <- | Minus |
chr3L | 3158856..3158988 | 1..131 | 97 | Minus | |
chr3L | 3157937..3158662 | 207..932 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12079-RA | 1..798 | 68..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12079-RA | 1..798 | 68..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12079-RA | 1..798 | 68..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12079-RA | 1..798 | 68..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NDUFS3-RA | 1..798 | 68..865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12079-RA | 33..966 | 1..932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12079-RA | 33..966 | 1..932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12079-RA | 38..971 | 1..932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12079-RA | 33..966 | 1..932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NDUFS3-RA | 38..971 | 1..932 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3158490..3159215 | 207..932 | 100 | <- | Minus |
3L | 3159274..3159348 | 132..206 | 100 | <- | Minus |
3L | 3159409..3159541 | 1..131 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3158490..3159215 | 207..932 | 100 | <- | Minus |
3L | 3159274..3159348 | 132..206 | 100 | <- | Minus |
3L | 3159409..3159541 | 1..131 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3158490..3159215 | 207..932 | 100 | <- | Minus |
3L | 3159274..3159348 | 132..206 | 100 | <- | Minus |
3L | 3159409..3159541 | 1..131 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3158490..3159215 | 207..932 | 100 | <- | Minus |
arm_3L | 3159274..3159348 | 132..206 | 100 | <- | Minus |
arm_3L | 3159409..3159541 | 1..131 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3158490..3159215 | 207..932 | 100 | <- | Minus |
3L | 3159274..3159348 | 132..206 | 100 | <- | Minus |
3L | 3159409..3159541 | 1..131 | 97 | Minus |
Translation from 67 to 864
> LD25561.hyp MAALIRNLGARAAVAALSAKHVVPAAGSTALRMASTTPVEPKKADKPTVR QPDAVARSHLSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQ FLKDHHQAQFTNLVDIAGVDVPCRKNRFEVVYNLLSLRYNSRIRVKTYTD ELTPLDSACEVHKAANWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPQ RRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSAPWEQFPNFRNA NPPAEVVPPQAPAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NDUFS3-PA | 265 | CG12079-PA | 1..265 | 1..265 | 1394 | 100 | Plus |
Translation from 67 to 864
> LD25561.pep MAALIRNLGARAAVAALSAKHVVPAAGSTALRMASTTPVEPKKADKPTVR QPDAVARSHLSDFGRYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQ FLKDHHQAQFTNLVDIAGVDVPCRKNRFEVVYNLLSLRYNSRIRVKTYTD ELTPLDSACEVHKAANWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPQ RRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSAPWEQFPNFRNA NPPAEVVPPQAPAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10219-PA | 261 | GF10219-PA | 1..261 | 1..265 | 1259 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14478-PA | 265 | GG14478-PA | 1..265 | 1..265 | 1401 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16082-PA | 261 | GH16082-PA | 1..258 | 1..259 | 1246 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-30-PA | 265 | CG12079-PA | 1..265 | 1..265 | 1394 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12345-PA | 267 | GI12345-PA | 1..258 | 1..259 | 1266 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20750-PA | 266 | GL20750-PA | 1..266 | 1..265 | 1294 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11380-PA | 266 | GA11380-PA | 1..266 | 1..265 | 1297 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14080-PA | 265 | GM14080-PA | 1..265 | 1..265 | 1398 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13354-PA | 265 | GD13354-PA | 1..265 | 1..265 | 1402 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12236-PA | 267 | GJ12236-PA | 1..258 | 1..259 | 1268 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18031-PA | 266 | GK18031-PA | 1..266 | 1..265 | 1305 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21665-PA | 265 | GE21665-PA | 1..265 | 1..265 | 1394 | 98.5 | Plus |