BDGP Sequence Production Resources |
Search the DGRC for LD25644
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 256 |
Well: | 44 |
Vector: | pOT2 |
Associated Gene/Transcript | tadr-RB |
Protein status: | LD25644.pep: wuzgold |
Sequenced Size: | 2672 |
Gene | Date | Evidence |
---|---|---|
CG9264 | 2002-11-12 | Blastp of sequenced clone |
CG9264 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9264 | 2008-04-29 | Release 5.5 accounting |
CG9264 | 2008-08-15 | Release 5.9 accounting |
CG9264 | 2008-12-18 | 5.12 accounting |
2672 bp (2672 high quality bases) assembled on 2002-11-12
GenBank Submission: BT001489
> LD25644.complete AAATGGTGTATGGCTGGCCGTTCTTAAAGATTTCGTCACATCTTCGGATT GCATAATAGGCAAATTTTTGTTATTTGACTTGATATCGTTTGTTTTGTAT ACGTGCGTTTTTTAGACTTCGATTTGCATTTTGAGCAAGAAGTCATGCGG GTCAAGAAACTGATAAAAATGTTTAAGGCCACTTGCGGAATTATGTGAGC ACTTTTGGGCACAAAAATAAAAAAAAAATTCTTTCACTTTCTATGCTTAT ATTAAACATACTTAACTCCACTTATTCACCGCTGGGTGTTATTACCTGCA AATACACATCCTGCTGGACGTGCTCTGCAGCGGCAGTGGCGCCCGTTTGG CCCTCGGAGCCTCGGTAATCTCCTATCTGATTGTCTACAACGAGGCTTCC GCTCCCAGCCTGCTGGTTGGCGTTGTCTTGGCCACCGTTTATGGCGCAAT GGCAGCCCGCTGTAAAACTAGCCTCCGCAGCCTGCAAATGCCGTATGTGC GGGCCACAAATAAATTCGACTTTAGCTGTTTGTTTCTGGCCATCTGGCTA GATGCTCTGGCCACCGTGTGTGCCTGCGCTGCCCTGGCGAGGACCCTCAG TGCCTGCTTGGACGCCATGACCGGAGGTCTGGCCAGGATTCTCATATTGG GCCGCAATGCACCCGCGAATGAGCCGTGGCCGGATGTTCTTGGCGTGTCG GTTGTCTTCCTCGTCACTGGGATGTTCATGCTGGGCCTGGAGCACTCGAG GGCCTTCAGCCTCATCCTGACTCTTGGCATGTTTGGCTTGAACGCCATTT TAAGCGCCGTCGGCTGGTGGCGGGGCGACATGTTGGCCTGGTCTGCGGAT AGCTACTTCCAGCCCGATGGCATTAGCAGTGTCTTCCTGGGTACTGCCCT GCTCACCTACTCCTTCCCCGGCGATTGGCCCCAACAACTTCGAGGTGGAC GATTCACGGCGACTCTAATTACGGGATTGGTCAGTACTTCGCTGCTGCTG ACGGCCATTTGTCTGTCGACGGTGGTGCATTATAGATCTCAGGAGGACTA TGTAGCCGTGCCCTTGTTCAACATTCTGGATGAAAACGGCTTCCATAAGT TGGTTCCTGCCTCGGCTTGCATGTTGCTTTTGACGAGTTCGGCGGCATTT CTGGAGCTCTTTCCGGAACTATATGGTATTGTTGTGCGACTGGCCACCTC GGAGTGGAGAATACTGTCCAAGCAGATCAGTTATGAGAGCTCGGAGAGTG GTAACCCCGTGCTGGCTGTGTTCATCGCCGGCAGCATGTGTGCCATGTTG GCCTTCGCCTGTCCACTACAGCATCTCAGTTACACATTAGCCGCTGGCCA CATGGGTGGGGTATTCCTGAGGGCCCTTTACCTCCTATACATCCCTTACA GACCCAAATATATGGCGCCCAGCAGCGAGTCTTCACTGTCGTACAGTCGC CTATCCACAGCACCGTTTGCCAAGAGCAGCAGCTACAGCAGTGCCGCAAC TTCCAGTTCGAGTCGCTTAAAGAGAAGTCTCTGGAAGATCGGTCTGCCCA AGCACAGTAACTTAAAAAAGCCGAAGACCAAGCCCAGGAACAAACAAGAG CTGGAAAAGGAGTGGCTGCTCCTGGGTGAACCCACCTCGCCCTGTCCTCA ACGAGAGGGCAGGGATGTGGAGTCCACCATTCTTTCCGATGGCGAGCCAC CGCCATCTGACTTTGAGTACCCAGATAAATTTGACAAAAGTGACTCGGAC ACCTCCACCGACATTGATGCCATTGTGGATGAGTATCGTGAAAAGATTAA GGTAACCACCGCCGGACCTTTGGAGCGCAGTGTGCGAGTGCCTACGGTGA GTTCCTGGCGCGTGACCATTTTCGCCATTGTGGTGATTGGATTGGGCATT GCCCTATGCATTGCCGGGCTCATGATGCACTGGGCTCCGGCAGCGTTGAC CGGAGGGATTGGGGTTCTTATCGTGACCATTATGATGGGTTTTATACCCA AATACACGGGCAGTGTGATCAACGTGAGTCCCGTGATCTGTGGAATGTCG CTGCTGATGGGCGTGATCCTATTCAGTGGCTGTGCTATACATTCCTGGCC GGGATTGCTTATCTGGCTGATGGCTGGACTCATTCTGGTGATCAGATGCG ATAAATACTGTTGCAATTGTTTTGAGCACACCACCATAATGAATGCCCAG CTGATACCTAGTGTCTCGGGAAAGAGCAACATGGGGTCAGCGTCGGGATC GGCATCAAATTTAGCGGGTCCCTCCACCAGCATCCGGATACCCAGACCGC CCAAGGGAATGGGCGTAGTCGGCTTGCCACAGCGCATCAACGAGCACAGA TGACAGTCGGAGTCCTCGGAGGAGGAAGGCGAAGACCTGTTCCACGAGGA CTTCAATGTGCGCGACTTTGACGAGGAGGATGACGAAGATTGCTGGACTG ATTAGCTTGCGCCTTTTAAAATCCGTTTAGAAAACTATTTAATTGCTATG CGGATCCCCAGGACGATCCAGCTTCGAGCCACATATGCCTGAAATTTTCT AGCTAGCTAAATTGATTGTCGAAATTTACTTATGTATTTACAAATATATA GCTAGGCGACTCTCTGTACAACTAAGTTCAGAATAAATTAAATTTTTCAA AACGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tadr-RB | 2654 | tadr-RB | 1..2654 | 1..2654 | 13270 | 100 | Plus |
tadr-RA | 2598 | tadr-RA | 317..2149 | 310..2142 | 9150 | 99.9 | Plus |
tadr-RA | 2598 | tadr-RA | 2144..2598 | 2200..2654 | 2275 | 100 | Plus |
nc_4097.a | 165 | nc_4097.a | 23..165 | 881..1023 | 715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 21078680..21079536 | 1800..2654 | 4205 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 21077769..21078437 | 1034..1702 | 3315 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 21069490..21069798 | 1..309 | 1545 | 100 | Plus |
chr2L | 23010047 | chr2L | 21076041..21076239 | 453..651 | 995 | 100 | Plus |
chr2L | 23010047 | chr2L | 21077450..21077601 | 881..1032 | 760 | 100 | Plus |
chr2L | 23010047 | chr2L | 21075840..21075985 | 310..455 | 730 | 100 | Plus |
chr2L | 23010047 | chr2L | 21076752..21076893 | 741..882 | 710 | 100 | Plus |
chr2L | 23010047 | chr2L | 21078517..21078620 | 1702..1805 | 520 | 100 | Plus |
chr2L | 23010047 | chr2L | 21076576..21076668 | 650..742 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21080199..21081057 | 1800..2658 | 4295 | 100 | Plus |
2L | 23513712 | 2L | 21079288..21079956 | 1034..1702 | 3345 | 100 | Plus |
2L | 23513712 | 2L | 21071008..21071316 | 1..309 | 1545 | 100 | Plus |
2L | 23513712 | 2L | 21077560..21077758 | 453..651 | 995 | 100 | Plus |
2L | 23513712 | 2L | 21078967..21079121 | 881..1035 | 775 | 100 | Plus |
2L | 23513712 | 2L | 21077359..21077504 | 310..455 | 730 | 100 | Plus |
2L | 23513712 | 2L | 21078269..21078410 | 741..882 | 710 | 100 | Plus |
2L | 23513712 | 2L | 21080036..21080139 | 1702..1805 | 520 | 100 | Plus |
2L | 23513712 | 2L | 21078093..21078185 | 650..742 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21080199..21081057 | 1800..2658 | 4295 | 100 | Plus |
2L | 23513712 | 2L | 21079288..21079956 | 1034..1702 | 3345 | 100 | Plus |
2L | 23513712 | 2L | 21071008..21071316 | 1..309 | 1545 | 100 | Plus |
2L | 23513712 | 2L | 21077560..21077758 | 453..651 | 995 | 100 | Plus |
2L | 23513712 | 2L | 21078967..21079121 | 881..1035 | 775 | 100 | Plus |
2L | 23513712 | 2L | 21077359..21077504 | 310..455 | 730 | 100 | Plus |
2L | 23513712 | 2L | 21078269..21078410 | 741..882 | 710 | 100 | Plus |
2L | 23513712 | 2L | 21080036..21080139 | 1702..1805 | 520 | 100 | Plus |
2L | 23513712 | 2L | 21078093..21078185 | 650..742 | 465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 21069490..21069798 | 1..309 | 100 | -> | Plus |
chr2L | 21075840..21075985 | 310..455 | 100 | -> | Plus |
chr2L | 21076044..21076238 | 456..650 | 100 | -> | Plus |
chr2L | 21076577..21076668 | 651..742 | 100 | -> | Plus |
chr2L | 21076754..21076891 | 743..880 | 100 | -> | Plus |
chr2L | 21077450..21077604 | 881..1035 | 99 | -> | Plus |
chr2L | 21077771..21078437 | 1036..1702 | 99 | -> | Plus |
chr2L | 21078518..21078616 | 1703..1801 | 100 | -> | Plus |
chr2L | 21078682..21079536 | 1802..2654 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9264-RB | 1..1905 | 449..2353 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tadr-RB | 1..1905 | 449..2353 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tadr-RD | 12..2160 | 307..2455 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9264-RB | 1..1905 | 449..2353 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tadr-RD | 12..2160 | 307..2455 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9264-RB | 1..2653 | 2..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tadr-RB | 1..2653 | 2..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tadr-RC | 309..2656 | 307..2654 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9264-RB | 1..2653 | 2..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tadr-RC | 309..2656 | 307..2654 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21071008..21071316 | 1..309 | 100 | -> | Plus |
2L | 21077359..21077504 | 310..455 | 100 | -> | Plus |
2L | 21077563..21077757 | 456..650 | 100 | -> | Plus |
2L | 21078094..21078185 | 651..742 | 100 | -> | Plus |
2L | 21078271..21078408 | 743..880 | 100 | -> | Plus |
2L | 21078967..21079121 | 881..1035 | 100 | -> | Plus |
2L | 21079290..21079956 | 1036..1702 | 100 | -> | Plus |
2L | 21080037..21080135 | 1703..1801 | 100 | -> | Plus |
2L | 21080201..21081053 | 1802..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21071008..21071316 | 1..309 | 100 | -> | Plus |
2L | 21077359..21077504 | 310..455 | 100 | -> | Plus |
2L | 21077563..21077757 | 456..650 | 100 | -> | Plus |
2L | 21078094..21078185 | 651..742 | 100 | -> | Plus |
2L | 21078271..21078408 | 743..880 | 100 | -> | Plus |
2L | 21078967..21079121 | 881..1035 | 100 | -> | Plus |
2L | 21079290..21079956 | 1036..1702 | 100 | -> | Plus |
2L | 21080037..21080135 | 1703..1801 | 100 | -> | Plus |
2L | 21080201..21081053 | 1802..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21071008..21071316 | 1..309 | 100 | -> | Plus |
2L | 21077359..21077504 | 310..455 | 100 | -> | Plus |
2L | 21077563..21077757 | 456..650 | 100 | -> | Plus |
2L | 21078094..21078185 | 651..742 | 100 | -> | Plus |
2L | 21078271..21078408 | 743..880 | 100 | -> | Plus |
2L | 21078967..21079121 | 881..1035 | 100 | -> | Plus |
2L | 21079290..21079956 | 1036..1702 | 100 | -> | Plus |
2L | 21080037..21080135 | 1703..1801 | 100 | -> | Plus |
2L | 21080201..21081053 | 1802..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 21078967..21079121 | 881..1035 | 100 | -> | Plus |
arm_2L | 21078094..21078185 | 651..742 | 100 | -> | Plus |
arm_2L | 21078271..21078408 | 743..880 | 100 | -> | Plus |
arm_2L | 21071008..21071316 | 1..309 | 100 | -> | Plus |
arm_2L | 21077359..21077504 | 310..455 | 100 | -> | Plus |
arm_2L | 21077563..21077757 | 456..650 | 100 | -> | Plus |
arm_2L | 21079290..21079956 | 1036..1702 | 100 | -> | Plus |
arm_2L | 21080037..21080135 | 1703..1801 | 100 | -> | Plus |
arm_2L | 21080201..21081053 | 1802..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21071008..21071316 | 1..309 | 100 | -> | Plus |
2L | 21077359..21077504 | 310..455 | 100 | -> | Plus |
2L | 21077563..21077757 | 456..650 | 100 | -> | Plus |
2L | 21078094..21078185 | 651..742 | 100 | -> | Plus |
2L | 21078271..21078408 | 743..880 | 100 | -> | Plus |
2L | 21078967..21079121 | 881..1035 | 100 | -> | Plus |
2L | 21079290..21079956 | 1036..1702 | 100 | -> | Plus |
2L | 21080037..21080135 | 1703..1801 | 100 | -> | Plus |
2L | 21080201..21081053 | 1802..2654 | 100 | Plus |
Translation from 448 to 2352
> LD25644.hyp MAARCKTSLRSLQMPYVRATNKFDFSCLFLAIWLDALATVCACAALARTL SACLDAMTGGLARILILGRNAPANEPWPDVLGVSVVFLVTGMFMLGLEHS RAFSLILTLGMFGLNAILSAVGWWRGDMLAWSADSYFQPDGISSVFLGTA LLTYSFPGDWPQQLRGGRFTATLITGLVSTSLLLTAICLSTVVHYRSQED YVAVPLFNILDENGFHKLVPASACMLLLTSSAAFLELFPELYGIVVRLAT SEWRILSKQISYESSESGNPVLAVFIAGSMCAMLAFACPLQHLSYTLAAG HMGGVFLRALYLLYIPYRPKYMAPSSESSLSYSRLSTAPFAKSSSYSSAA TSSSSRLKRSLWKIGLPKHSNLKKPKTKPRNKQELEKEWLLLGEPTSPCP QREGRDVESTILSDGEPPPSDFEYPDKFDKSDSDTSTDIDAIVDEYREKI KVTTAGPLERSVRVPTVSSWRVTIFAIVVIGLGIALCIAGLMMHWAPAAL TGGIGVLIVTIMMGFIPKYTGSVINVSPVICGMSLLMGVILFSGCAIHSW PGLLIWLMAGLILVIRCDKYCCNCFEHTTIMNAQLIPSVSGKSNMGSASG SASNLAGPSTSIRIPRPPKGMGVVGLPQRINEHR*
Translation from 448 to 2352
> LD25644.pep MAARCKTSLRSLQMPYVRATNKFDFSCLFLAIWLDALATVCACAALARTL SACLDAMTGGLARILILGRNAPANEPWPDVLGVSVVFLVTGMFMLGLEHS RAFSLILTLGMFGLNAILSAVGWWRGDMLAWSADSYFQPDGISSVFLGTA LLTYSFPGDWPQQLRGGRFTATLITGLVSTSLLLTAICLSTVVHYRSQED YVAVPLFNILDENGFHKLVPASACMLLLTSSAAFLELFPELYGIVVRLAT SEWRILSKQISYESSESGNPVLAVFIAGSMCAMLAFACPLQHLSYTLAAG HMGGVFLRALYLLYIPYRPKYMAPSSESSLSYSRLSTAPFAKSSSYSSAA TSSSSRLKRSLWKIGLPKHSNLKKPKTKPRNKQELEKEWLLLGEPTSPCP QREGRDVESTILSDGEPPPSDFEYPDKFDKSDSDTSTDIDAIVDEYREKI KVTTAGPLERSVRVPTVSSWRVTIFAIVVIGLGIALCIAGLMMHWAPAAL TGGIGVLIVTIMMGFIPKYTGSVINVSPVICGMSLLMGVILFSGCAIHSW PGLLIWLMAGLILVIRCDKYCCNCFEHTTIMNAQLIPSVSGKSNMGSASG SASNLAGPSTSIRIPRPPKGMGVVGLPQRINEHR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21052-PA | 621 | GF21052-PA | 1..621 | 1..634 | 2629 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21272-PA | 664 | GG21272-PA | 52..664 | 1..634 | 3110 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10405-PA | 679 | GH10405-PA | 52..679 | 1..634 | 2477 | 78.9 | Plus |
Dgri\GH23426-PA | 679 | GH23426-PA | 52..679 | 1..634 | 2462 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tadr-PD | 719 | CG9264-PD | 52..685 | 1..634 | 3282 | 100 | Plus |
tadr-PC | 685 | CG9264-PC | 52..685 | 1..634 | 3282 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23251-PA | 727 | GI23251-PA | 74..694 | 1..629 | 2474 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25883-PA | 685 | GL25883-PA | 57..652 | 6..623 | 2469 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21655-PA | 684 | GA21655-PA | 57..684 | 6..634 | 2672 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23387-PA | 261 | GM23387-PA | 52..255 | 1..204 | 1063 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12041-PA | 377 | GD12041-PA | 1..377 | 225..634 | 1725 | 91 | Plus |
Dsim\GD24291-PA | 245 | GD24291-PA | 52..119 | 1..68 | 350 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23762-PA | 676 | GJ23762-PA | 52..676 | 1..634 | 2562 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24314-PA | 679 | GK24314-PA | 53..674 | 1..628 | 2538 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12890-PA | 685 | GE12890-PA | 52..685 | 1..634 | 3231 | 96.1 | Plus |