BDGP Sequence Production Resources |
Search the DGRC for LD25913
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 259 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | fal-RB |
Protein status: | LD25913.pep: gold |
Preliminary Size: | 1973 |
Sequenced Size: | 1922 |
Gene | Date | Evidence |
---|---|---|
CG9670 | 2001-01-01 | Release 2 assignment |
CG9670 | 2001-07-04 | Blastp of sequenced clone |
CG9670 | 2003-01-01 | Sim4 clustering to Release 3 |
fal | 2008-04-29 | Release 5.5 accounting |
fal | 2008-08-15 | Release 5.9 accounting |
fal | 2008-12-18 | 5.12 accounting |
1922 bp (1922 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051729
> LD25913.complete CTTGACGAATCGGAGTCGCTATAAAATGTAAAAAAATACCCGGATGTTAT ATATTCGCACAAATCGGCGGGAAGACAGCCTTCAAGACGTCGTGCTGTGC GCATTTTCGGGTTTGCTTCGGACGCGGATTGTCGATAAGCAGGAATCCAA TTAGAATGTCAGCCAGCGCAGTGATTCACTCCCTCGCTCAGCGACGGCGC TCTCTTTCTCTTCCCCTCTCCAACGAACCAAAGAACTCGAAACTCCCGCT TTCCCAACAACAACTACAACAGCAGCAGCATGGACACCACGAACAACAAC AACGCCCATCTATGCTTATTGAGGATGAGGTTCACGGTGTAATCGAACTG TCGAGCCATATCCAAGAGATCGTCGAGCATCCACTCTTCCAGCGCCTCAA ACATGTCCACCAGTTGGGTCTCCTTCCGTGGGCCATCGATAAGAAGGCCG ATCACAAGCGATACGATCATTGCCTTGGAGCCTACAAAAGCGCGCAGGAT CACCTTAGGGCCATCGAACGTAATTCGCATTACGAGCCAAAGCTTCCGGA TTGGTGTCGTCAGGCGGTGGAGATAGCCGCTCTCCTTCACGACATTGGTC ACGGACCAATGTCACATGCCTGGGAGTTGGTGACCCACCATGAATTTGAT CACGAGGAAAACGCAATGGCCTGTGTGGATAAAATTTTTAAGGATGCCCT CAATCAGGAGCTAGTCTCCTTGAGAGATGATGGTGGCGGGCGAGGTGTTC AATTGATAAAGGCTTTGATATTGGGATCCAGTGAGAATCTGCCGTTCCCC ATGCTGGGACATACCTACATCTTTGATATTGTGCATAATCGTCGCTGCGG ATTGGATGTGGATAAATGGGATTATCTGCGGCGTGATAACAAGCGCCTGA AAATACTCAGCTCTGCGGAAATGGACTTTGATGATGTATTTCTTCAGGCT CGCATATCACCTGATGGTCAACGCATAGAGTATCGTTATGCTGACTATCA TCGGGTATATCGCTTGTTCGAGGCGCGATCGCTGCTCCACGTAAAGGCCT ATCAATATCCGCTAACTTGTGCCATGGATGTTATTTTTGTCAGTGTAGTA CAACGTATTGCTCCAGAACTACTAAGTATTCGCTCAAAGGATCCAAAGTG GCTGGAATTGACCGACGAGTATGTTTTAAATGTCATTGAAAAGGATCCTA TATCGAGATATGTAAAAGAACCTCATCGACTCGTAGAAGTCCCCAGCAAC GACTGTTCCGGATCGGACATCATACGGGTGAACAGGGTCATACCTGGACC TTGGGAGCTTATAAAATCCGCAAGGGAGTTAGCTTTCTTTGGCAATAAGC GCAAGAAGCGTCCAATTACCCGATGTGTAAGCCCGACGATAGTCAACAAG TGCTTTAAGTTAGAGTAGAAACATCCACCAGAGAATAGTTCATGTTAAGT CAACAAACAAACGTATGTTATTGTTTCCATTCGCTTCGTTTTCTTATATT TAATAAACTATATTTCATAAAAAGATGTACAAATACTCCAACGGTTGCGT TCGTAGTGCGGCCATTCTTATTGCCATTTACATTTTGTTATCCAGCATAG TCGTTGAGTTTTTTTTAGTTATTTAATGTTCTTTATTTTTATTTTTCGTT TCCATTTATAGTTAAAACTGTGAAATCAGTGGAAAGACAATATGTTCTTA AAATATTCATTTATTAGTTTATACAGTGTTTATCATAATCGACTTAAAAC TAAAATACTAAACCAAAAATTTCAACAGTTCACTTGAAGACATCACAATT CAAACTCAGGTCTTTATAACATAAGGTACTTACTAATCTATATAAATATA AGATGCATTTGTCATATTTTTGATAACCGCTTTGAAATATACACAAGAGA AAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19287008..19287708 | 651..1351 | 3490 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 19287766..19288319 | 1351..1904 | 2755 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 19284268..19284578 | 1..311 | 1510 | 99 | Plus |
chr3L | 24539361 | chr3L | 19286761..19286937 | 474..650 | 870 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 19286536..19286702 | 312..478 | 820 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19297519..19298219 | 651..1351 | 3505 | 100 | Plus |
3L | 28110227 | 3L | 19298277..19298832 | 1351..1906 | 2780 | 100 | Plus |
3L | 28110227 | 3L | 19294788..19295098 | 1..311 | 1555 | 100 | Plus |
3L | 28110227 | 3L | 19297272..19297448 | 474..650 | 870 | 99.4 | Plus |
3L | 28110227 | 3L | 19297046..19297212 | 312..478 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19290619..19291319 | 651..1351 | 3505 | 100 | Plus |
3L | 28103327 | 3L | 19291377..19291932 | 1351..1906 | 2780 | 100 | Plus |
3L | 28103327 | 3L | 19287888..19288198 | 1..311 | 1555 | 100 | Plus |
3L | 28103327 | 3L | 19290372..19290548 | 474..650 | 870 | 99.4 | Plus |
3L | 28103327 | 3L | 19290146..19290312 | 312..478 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2584..2666 | 220..302 | 172 | 67.5 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3275..3323 | 251..302 | 145 | 78.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6829 | 255..302 | 141 | 77.1 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 515..573 | 239..300 | 141 | 72.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2487..2541 | 255..309 | 140 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2385 | 226..303 | 138 | 64.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2430 | 255..303 | 137 | 75.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6878 | 256..303 | 132 | 75 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2400 | 218..303 | 130 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2394..2442 | 255..303 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2484..2546 | 255..318 | 128 | 68.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6788 | 255..303 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6809 | 255..303 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6842 | 255..303 | 128 | 73.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2331..2379 | 255..303 | 128 | 73.5 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 543..591 | 255..303 | 128 | 73.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1112..1160 | 255..303 | 128 | 73.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1157 | 256..306 | 122 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2442..2490 | 255..303 | 119 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2880..2928 | 255..303 | 119 | 71.4 | Plus |
Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 2057..2196 | 1851..1711 | 116 | 56.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1589 | 255..302 | 114 | 70.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6767 | 256..303 | 114 | 70.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2343 | 267..303 | 113 | 78.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2793..2838 | 255..300 | 113 | 71.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19284268..19284521 | 1..254 | 98 | == | Plus |
chr3L | 19286536..19286702 | 312..478 | 99 | -> | Plus |
chr3L | 19286766..19286937 | 479..650 | 100 | -> | Plus |
chr3L | 19287008..19287708 | 651..1351 | 99 | -> | Plus |
chr3L | 19287767..19288319 | 1352..1904 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RA | 1..1263 | 156..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RA | 1..1263 | 156..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RC | 1..1107 | 312..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RA | 1..1263 | 156..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RC | 1..1107 | 312..1418 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RB | 20..1923 | 1..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RB | 20..1923 | 1..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RB | 22..1925 | 1..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RB | 20..1923 | 1..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fal-RB | 22..1925 | 1..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19294788..19295098 | 1..311 | 100 | -> | Plus |
3L | 19297046..19297212 | 312..478 | 100 | -> | Plus |
3L | 19297277..19297448 | 479..650 | 100 | -> | Plus |
3L | 19297519..19298219 | 651..1351 | 100 | -> | Plus |
3L | 19298278..19298830 | 1352..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19294788..19295098 | 1..311 | 100 | -> | Plus |
3L | 19297046..19297212 | 312..478 | 100 | -> | Plus |
3L | 19297277..19297448 | 479..650 | 100 | -> | Plus |
3L | 19297519..19298219 | 651..1351 | 100 | -> | Plus |
3L | 19298278..19298830 | 1352..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19294788..19295098 | 1..311 | 100 | -> | Plus |
3L | 19297046..19297212 | 312..478 | 100 | -> | Plus |
3L | 19297277..19297448 | 479..650 | 100 | -> | Plus |
3L | 19297519..19298219 | 651..1351 | 100 | -> | Plus |
3L | 19298278..19298830 | 1352..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19287888..19288198 | 1..311 | 100 | -> | Plus |
arm_3L | 19290146..19290312 | 312..478 | 100 | -> | Plus |
arm_3L | 19290377..19290548 | 479..650 | 100 | -> | Plus |
arm_3L | 19290619..19291319 | 651..1351 | 100 | -> | Plus |
arm_3L | 19291378..19291930 | 1352..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19287888..19288198 | 1..311 | 100 | -> | Plus |
3L | 19290146..19290312 | 312..478 | 100 | -> | Plus |
3L | 19290377..19290548 | 479..650 | 100 | -> | Plus |
3L | 19290619..19291319 | 651..1351 | 100 | -> | Plus |
3L | 19291378..19291930 | 1352..1904 | 100 | Plus |
Translation from 155 to 1417
> LD25913.pep MSASAVIHSLAQRRRSLSLPLSNEPKNSKLPLSQQQLQQQQHGHHEQQQR PSMLIEDEVHGVIELSSHIQEIVEHPLFQRLKHVHQLGLLPWAIDKKADH KRYDHCLGAYKSAQDHLRAIERNSHYEPKLPDWCRQAVEIAALLHDIGHG PMSHAWELVTHHEFDHEENAMACVDKIFKDALNQELVSLRDDGGGRGVQL IKALILGSSENLPFPMLGHTYIFDIVHNRRCGLDVDKWDYLRRDNKRLKI LSSAEMDFDDVFLQARISPDGQRIEYRYADYHRVYRLFEARSLLHVKAYQ YPLTCAMDVIFVSVVQRIAPELLSIRSKDPKWLELTDEYVLNVIEKDPIS RYVKEPHRLVEVPSNDCSGSDIIRVNRVIPGPWELIKSARELAFFGNKRK KRPITRCVSPTIVNKCFKLE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23671-PA | 368 | GF23671-PA | 1..367 | 53..419 | 1455 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16031-PA | 419 | GG16031-PA | 1..419 | 1..420 | 1834 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17173-PA | 409 | GH17173-PA | 35..408 | 46..419 | 1074 | 54 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fal-PD | 368 | CG9670-PD | 1..368 | 53..420 | 1961 | 100 | Plus |
fal-PB | 368 | CG9670-PB | 1..368 | 53..420 | 1961 | 100 | Plus |
fal-PC | 368 | CG9670-PC | 1..368 | 53..420 | 1961 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11786-PA | 415 | GI11786-PA | 45..415 | 51..420 | 1070 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20931-PA | 368 | GL20931-PA | 1..368 | 53..420 | 1407 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21953-PA | 407 | GA21953-PA | 38..407 | 51..420 | 1399 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15021-PA | 444 | GM15021-PA | 77..444 | 53..420 | 1896 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14799-PA | 419 | GD14799-PA | 1..419 | 1..420 | 2022 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13487-PA | 414 | GJ13487-PA | 45..413 | 51..419 | 1134 | 56.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20191-PA | 409 | GK20191-PA | 13..409 | 29..420 | 1157 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23074-PA | 368 | GE23074-PA | 1..368 | 53..420 | 1780 | 88.9 | Plus |
Translation from 155 to 1417
> LD25913.hyp MSASAVIHSLAQRRRSLSLPLSNEPKNSKLPLSQQQLQQQQHGHHEQQQR PSMLIEDEVHGVIELSSHIQEIVEHPLFQRLKHVHQLGLLPWAIDKKADH KRYDHCLGAYKSAQDHLRAIERNSHYEPKLPDWCRQAVEIAALLHDIGHG PMSHAWELVTHHEFDHEENAMACVDKIFKDALNQELVSLRDDGGGRGVQL IKALILGSSENLPFPMLGHTYIFDIVHNRRCGLDVDKWDYLRRDNKRLKI LSSAEMDFDDVFLQARISPDGQRIEYRYADYHRVYRLFEARSLLHVKAYQ YPLTCAMDVIFVSVVQRIAPELLSIRSKDPKWLELTDEYVLNVIEKDPIS RYVKEPHRLVEVPSNDCSGSDIIRVNRVIPGPWELIKSARELAFFGNKRK KRPITRCVSPTIVNKCFKLE*