BDGP Sequence Production Resources |
Search the DGRC for LD25963
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 259 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8525-RA |
Protein status: | LD25963.pep: gold |
Preliminary Size: | 1372 |
Sequenced Size: | 1243 |
Gene | Date | Evidence |
---|---|---|
CG8525 | 2001-10-10 | Blastp of sequenced clone |
CG8525 | 2008-04-29 | Release 5.5 accounting |
CG8525 | 2008-08-15 | Release 5.9 accounting |
CG8525 | 2008-12-18 | 5.12 accounting |
1243 bp (1243 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061335
> LD25963.complete CGGCGATCGAACGATTTTATCTTCAAGTGGAATTTAGTCAGCTAAATTTT CGTTTGACAGCAATGAGCAGCATGGATGTGAAGGAATTGGAAGTAAACAA AACCCTGCCCTATGATCCCTCCCTGCTTAAGGTAAACATCTCGCTGCGGC AGGTCGAGGAGATCGCTTTGACGGTGTCCCAGCGATGCCATGTCACCGGA GCCAACGAAATCGCCTGGGCGCTGAGGGCTCTGATGCTGACAGATCTTAC CACCTTGGCGGGCGATGATACGGCTGCCAATGTGCGGAGACTATGCCTAC GCGCCTGCTATCCCTTCGAGCCGCAGTTCTTTGACAAGTTCTTCGACCGG GCTCTCATCCCAGAGATGCACACGGCCGCCGTTTGCGTTTATCCCGCCAG GGTAAAGGACGCCTATTTAGCTATCCAACAGTACGACAAACTGGATAAGG TGGCTATTGCAGCGGTGGCCACGGGATTTCCCACGGGCCAGTACGGCCTG CAGACCCGCCTGCAGGAGATCAGCCACGCCATTCTTGCTGGAGCCACAGA GATCGACATTGTGATCAATCGCCAGTTGGCCCTCGTTGGCGACTGGGAGG CCATGTACAACGAGGTGGTCCTTATGCGCAGTGCCTGTGGACAAAGGGCT CACCTAAAAACAATTCTGGCCATCGGGGAGCTGGGCACCATGGATAATGT TTACAAAGCAGCCATGGTTTGCATGATGGCCGGAGCGGATTTTATCAAGA CCTCAACGGGAAAGGAGACAGTCAACGCCACCCTGCCCGTTGGCCTGGTC ATGATATTTGCCATTCAGGAATTCAAACGACGCACGTGCCAGATTGTGGG CCTTAAGCCAGCCGGAGGAGTAAAGACTGTACGAGATGCGATCGCCTGGA TGACGTTGGTCAACGAAACTCTTGGCATCCGCTGGTTGCGTCCCGAGAGG TTCCGTTTCGGAGCCTCCGGATTGCTGGACGACATTGAACGCGTTGTGCG TCAGGGTGTCAAAAAACTCGAGGAGGATGAGGCTCAGAAAAATGTGCCCG TGTCTCGCGAGGCTGCTGCTGCCGAGACCTTCTGCAAGGAGCTGCGGAAG AAGTAGGAGGAGGCCAACTGGTCGAATCCGTATTCTGGACTTTACTCACT CTAAGTGCATTTATTGTAGCTTTTTTATACAACTGACTAAAACCTATAGC AAAAAAAACCGCAAAAAAAAATTTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8313063..8313649 | 114..700 | 2935 | 100 | Plus |
chr2R | 21145070 | chr2R | 8313710..8314224 | 699..1213 | 2575 | 100 | Plus |
chr2R | 21145070 | chr2R | 8312897..8313010 | 1..114 | 570 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12425815..12426401 | 114..700 | 2935 | 100 | Plus |
2R | 25286936 | 2R | 12426462..12426976 | 699..1213 | 2575 | 100 | Plus |
2R | 25286936 | 2R | 12425649..12425762 | 1..114 | 570 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12427014..12427600 | 114..700 | 2935 | 100 | Plus |
2R | 25260384 | 2R | 12427661..12428175 | 699..1213 | 2575 | 100 | Plus |
2R | 25260384 | 2R | 12426848..12426961 | 1..114 | 570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8312897..8313010 | 1..114 | 100 | -> | Plus |
chr2R | 8313064..8313647 | 115..698 | 100 | -> | Plus |
chr2R | 8313710..8314224 | 699..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 1..1044 | 63..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 1..1044 | 63..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 1..1044 | 63..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 1..1044 | 63..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 1..1044 | 63..1106 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 192..1391 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 167..1378 | 1..1212 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 167..1378 | 1..1212 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 192..1391 | 1..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8525-RA | 167..1378 | 1..1212 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12425816..12426399 | 115..698 | 100 | -> | Plus |
2R | 12426462..12426976 | 699..1213 | 100 | Plus | |
2R | 12425649..12425762 | 1..114 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12425816..12426399 | 115..698 | 100 | -> | Plus |
2R | 12426462..12426976 | 699..1213 | 100 | Plus | |
2R | 12425649..12425762 | 1..114 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12425816..12426399 | 115..698 | 100 | -> | Plus |
2R | 12426462..12426976 | 699..1213 | 100 | Plus | |
2R | 12425649..12425762 | 1..114 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8313154..8313267 | 1..114 | 100 | -> | Plus |
arm_2R | 8313321..8313904 | 115..698 | 100 | -> | Plus |
arm_2R | 8313967..8314481 | 699..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12427015..12427598 | 115..698 | 100 | -> | Plus |
2R | 12427661..12428175 | 699..1213 | 100 | Plus | |
2R | 12426848..12426961 | 1..114 | 100 | -> | Plus |
Translation from 2 to 1105
> LD25963.hyp AIERFYLQVEFSQLNFRLTAMSSMDVKELEVNKTLPYDPSLLKVNISLRQ VEEIALTVSQRCHVTGANEIAWALRALMLTDLTTLAGDDTAANVRRLCLR ACYPFEPQFFDKFFDRALIPEMHTAAVCVYPARVKDAYLAIQQYDKLDKV AIAAVATGFPTGQYGLQTRLQEISHAILAGATEIDIVINRQLALVGDWEA MYNEVVLMRSACGQRAHLKTILAIGELGTMDNVYKAAMVCMMAGADFIKT STGKETVNATLPVGLVMIFAIQEFKRRTCQIVGLKPAGGVKTVRDAIAWM TLVNETLGIRWLRPERFRFGASGLLDDIERVVRQGVKKLEEDEAQKNVPV SREAAAAETFCKELRKK*
Translation from 62 to 1105
> LD25963.pep MSSMDVKELEVNKTLPYDPSLLKVNISLRQVEEIALTVSQRCHVTGANEI AWALRALMLTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIP EMHTAAVCVYPARVKDAYLAIQQYDKLDKVAIAAVATGFPTGQYGLQTRL QEISHAILAGATEIDIVINRQLALVGDWEAMYNEVVLMRSACGQRAHLKT ILAIGELGTMDNVYKAAMVCMMAGADFIKTSTGKETVNATLPVGLVMIFA IQEFKRRTCQIVGLKPAGGVKTVRDAIAWMTLVNETLGIRWLRPERFRFG ASGLLDDIERVVRQGVKKLEEDEAQKNVPVSREAAAAETFCKELRKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12866-PA | 349 | GF12866-PA | 1..338 | 4..341 | 1628 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20303-PA | 346 | GG20303-PA | 1..346 | 1..346 | 1800 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21204-PA | 336 | GH21204-PA | 2..324 | 4..326 | 1442 | 82 | Plus |
Dgri\GH20704-PA | 320 | GH20704-PA | 7..319 | 9..321 | 1334 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8525-PD | 347 | CG8525-PD | 1..347 | 1..347 | 1764 | 100 | Plus |
CG8525-PA | 347 | CG8525-PA | 1..347 | 1..347 | 1764 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20493-PA | 352 | GI20493-PA | 1..347 | 4..347 | 1471 | 78.1 | Plus |
Dmoj\GI19065-PA | 314 | GI19065-PA | 3..312 | 9..318 | 1263 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11189-PA | 349 | GL11189-PA | 1..344 | 4..346 | 1578 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21137-PA | 349 | GA21137-PA | 1..344 | 4..346 | 1578 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21390-PA | 347 | GM21390-PA | 1..347 | 1..347 | 1838 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10886-PA | 347 | GD10886-PA | 1..347 | 1..347 | 1843 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22343-PA | 349 | GJ22343-PA | 1..346 | 4..347 | 1495 | 80.6 | Plus |
Dvir\GJ20036-PA | 316 | GJ20036-PA | 2..315 | 8..321 | 1233 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20798-PA | 351 | GK20798-PA | 1..347 | 4..347 | 1635 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12463-PA | 347 | GE12463-PA | 1..347 | 1..347 | 1802 | 96.5 | Plus |