Clone LD26005 Report

Search the DGRC for LD26005

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:260
Well:5
Vector:pOT2
Associated Gene/TranscriptRpt6-RA
Protein status:LD26005.pep: gold
Preliminary Size:1446
Sequenced Size:1363

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1489 2001-01-01 Release 2 assignment
CG1489 2001-07-04 Blastp of sequenced clone
CG1489 2003-01-01 Sim4 clustering to Release 3
Pros45 2008-04-29 Release 5.5 accounting
Pros45 2008-08-15 Release 5.9 accounting
Pros45 2008-12-18 5.12 accounting

Clone Sequence Records

LD26005.complete Sequence

1363 bp (1363 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051732

> LD26005.complete
CTTGCATTGTGGTCCTTCAGTTCGACAAATAATAACAAATTAAAGTGTAA
ACAGAAAACGAAAGATGACGGTGACGAATCGGATGGAAATCGAGTCGGCC
TACCATAAAGGCGAGGGATTCCGGTCCTACTACATCCAAAAGATCGAGGA
ACTGCAGCTGGTGGTGGCCGAGAAGCACCAGAATTTGAGACGACTGCAGG
CCCAGCGCAATGAGCTCAATGCTAAAGTTCGGATGCTGCGGGAGGAGCTG
CAGCTGCTCCAGGAACAGGGTAGCTATGTGGGCGAGGTTGTGAAGCCCAT
GGACAAGAAGAAAGTGCTGGTCAAGGTGCATCCCGAGGGCAAGTTCGTCG
TCGATCTGGACAAAAACATAGATATCAACGACGTAACCCCCAATTGCCGC
GTGGCCCTGCGCAATGAGAGCTATACGCTGCACAAGATTCTGCCCAATAA
GGTGGATCCGCTGGTCTCGCTTATGATGGTTGAAAAAGTTCCTGACTCCA
CATACGAAATGGTTGGCGGCCTGGACAAACAGATTAAAGAGATCAAGGAG
GTGATTGAGTTGCCCGTAAAGCATCCAGAGCTGTTTGATGCCTTGGGTAT
TGCCCAGCCGAAGGGAGTGCTCCTTTATGGACCTCCAGGTACAGGAAAGA
CTTTGCTGGCCAGGGCCGTTGCCCATCACACCGAGTGCACCTTCATTCGC
GTCTCTGGCTCAGAGCTGGTCCAGAAATTCATCGGCGAGGGTTCGCGCAT
GGTTCGAGAACTCTTTGTAATGGCCCGGGAACATGCACCATCAATTATTT
TCATGGACGAAATCGATTCCATTGGCTCGTCGCGTATTGAGTCAGGTTCC
GGCGGCGATTCCGAGGTGCAGCGTACTATGCTGGAGCTACTTAACCAGCT
GGACGGCTTTGAGGCCACCAAGAACATCAAGGTGATCATGGCCACCAATC
GCATTGACATCCTGGATCCCGCTCTGCTGCGTCCCGGCCGTATTGATCGC
AAGATCGAGTTCCCGCCACCAAACGAGGAGGCGCGTCTGGACATCTTGAA
GATCCACTCCCGTAAGATGAACCTCACGCGTGGCATTAATCTGCGCAAGA
TCGCCGAGCTAATGCCAGGCGCATCAGGTGCGGAAGTCAAGGGCGTCTGC
ACGGAGGCCGGCATGTATGCGCTGCGCGAACGACGCGTCCATGTCACCCA
GGAGGACTTCGAGATGGCTGTGGCCAAGGTGATGCAGAAGGACTCGGAGA
AGAACATGTCTATCAAGAAGCTGTGGAAGTAGGCGTTGATCGGCCATTGC
AAAAGAACCCTTATATTATTTTCAATAAATACATCAGTTAGTAAAAAAAA
AAAAAAAAAAAAA

LD26005.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
Pros45-RA 1437 Pros45-RA 88..1431 1..1344 6720 100 Plus
Rpt6R-RA 1569 Rpt6R-RA 411..1041 195..825 1310 80.5 Plus
Rpt6R-RA 1569 Rpt6R-RA 1070..1495 857..1282 975 81.9 Plus
CG1801-RC 5358 CG1801-RC 1..182 1201..1020 910 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:26:37
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 21181704..21182820 226..1342 5585 100 Plus
chr3R 27901430 chr3R 26404784..26405837 1282..226 2130 80.3 Minus
chrX 22417052 chrX 21181415..21181560 82..227 730 100 Plus
chrX 22417052 chrX 21181271..21181352 1..82 410 100 Plus
chr3R 27901430 chr3R 5580993..5581297 1011..707 295 73.1 Minus
chr3R 27901430 chr3R 19753653..19754058 1016..611 290 71.4 Minus
chr3R 27901430 chr3R 19577428..19577601 863..1036 270 77 Plus
chrX 22417052 chrX 11017355..11017679 692..1016 245 71.7 Plus
chr3L 24539361 chr3L 11933874..11933998 933..1057 190 76.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:18:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:26:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21316547..21317665 226..1344 5595 100 Plus
3R 32079331 3R 30582269..30583322 1282..226 2130 80.3 Minus
X 23542271 X 21316258..21316403 82..227 730 100 Plus
X 23542271 X 21316114..21316195 1..82 410 100 Plus
3R 32079331 3R 23930206..23930611 1016..611 305 71.7 Minus
3R 32079331 3R 9755157..9755461 1011..707 295 73.1 Minus
3R 32079331 3R 23754014..23754187 863..1036 285 77.6 Plus
X 23542271 X 11126108..11126432 692..1016 245 71.7 Plus
3L 28110227 3L 11943026..11943150 933..1057 190 76.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:54:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 21301639..21302757 226..1344 5595 100 Plus
3R 31820162 3R 30323554..30324153 825..226 1290 81 Minus
3R 31820162 3R 30323100..30323525 1282..857 975 81.9 Minus
X 23527363 X 21301350..21301495 82..227 730 100 Plus
X 23527363 X 21301206..21301287 1..82 410 100 Plus
3R 31820162 3R 23494911..23495018 929..1036 240 81.4 Plus
3R 31820162 3R 23671037..23671126 1016..927 240 84.4 Minus
3R 31820162 3R 9496048..9496137 951..862 225 83.3 Minus
X 23527363 X 11134365..11134462 851..948 190 79.5 Plus
3R 31820162 3R 23671327..23671442 726..611 145 75 Minus
Blast to na_te.dros performed on 2019-03-15 18:26:36 has no hits.

LD26005.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:27:39 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 21181271..21181352 1..82 100 -> Plus
chrX 21181416..21181560 83..227 100 -> Plus
chrX 21181706..21182820 228..1342 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:05:07 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Pros45-RA 1..1218 65..1282 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:21:17 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Pros45-RA 1..1218 65..1282 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:04:00 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Rpt6-RA 1..1218 65..1282 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:53:29 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Pros45-RA 1..1218 65..1282 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:03:16 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Rpt6-RA 1..1218 65..1282 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:18:01 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Pros45-RA 55..1396 1..1342 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:21:16 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Pros45-RA 55..1396 1..1342 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:04:00 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Rpt6-RA 63..1404 1..1342 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:53:29 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Pros45-RA 55..1396 1..1342 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:03:16 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
Rpt6-RA 63..1404 1..1342 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:27:39 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
X 21316114..21316195 1..82 100 -> Plus
X 21316259..21316403 83..227 100 -> Plus
X 21316549..21317663 228..1342 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:27:39 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
X 21316114..21316195 1..82 100 -> Plus
X 21316259..21316403 83..227 100 -> Plus
X 21316549..21317663 228..1342 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:27:39 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
X 21316114..21316195 1..82 100 -> Plus
X 21316259..21316403 83..227 100 -> Plus
X 21316549..21317663 228..1342 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:04:00 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21187286..21187430 83..227 100 -> Plus
arm_X 21187141..21187222 1..82 100 -> Plus
arm_X 21187576..21188690 228..1342 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:31:30 Download gff for LD26005.complete
Subject Subject Range Query Range Percent Splice Strand
X 21301206..21301287 1..82 100 -> Plus
X 21301351..21301495 83..227 100 -> Plus
X 21301641..21302755 228..1342 100   Plus

LD26005.pep Sequence

Translation from 64 to 1281

> LD26005.pep
MTVTNRMEIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNE
LNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDK
NIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMV
GGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR
AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEI
DSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL
DPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELM
PGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSI
KKLWK*

LD26005.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21725-PA 405 GF21725-PA 1..405 1..405 2126 99.3 Plus
Dana\GF23322-PA 402 GF23322-PA 14..402 16..405 1811 90.8 Plus
Dana\GF17023-PA 446 GF17023-PA 71..438 24..395 910 47 Plus
Dana\GF21021-PA 397 GF21021-PA 33..382 43..389 881 50 Plus
Dana\GF24499-PA 398 GF24499-PA 35..383 41..389 847 47.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19719-PA 405 GG19719-PA 1..405 1..405 2136 99.8 Plus
Dere\GG11925-PA 401 GG11925-PA 16..401 19..405 1806 91.2 Plus
Dere\GG12390-PA 439 GG12390-PA 64..431 24..395 909 47 Plus
Dere\GG17681-PA 397 GG17681-PA 33..382 43..389 882 50 Plus
Dere\GG15543-PA 398 GG15543-PA 30..383 36..389 859 47.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:39:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11847-PA 405 GH11847-PA 1..405 1..405 2108 98 Plus
Dgri\GH14117-PA 407 GH14117-PA 20..407 18..405 1667 82.7 Plus
Dgri\GH19692-PA 439 GH19692-PA 64..431 24..395 909 47 Plus
Dgri\GH17814-PA 397 GH17814-PA 33..382 43..389 885 50.3 Plus
Dgri\GH23603-PA 428 GH23603-PA 129..419 102..392 849 54.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:09
Subject Length Description Subject Range Query Range Score Percent Strand
Rpt6-PA 405 CG1489-PA 1..405 1..405 2050 100 Plus
Rpt6R-PA 399 CG2241-PA 12..399 17..405 1787 90.5 Plus
Rpt2-PB 439 CG5289-PB 64..431 24..395 900 47 Plus
Rpt2-PA 439 CG5289-PA 64..431 24..395 900 47 Plus
Rpt1-PA 433 CG1341-PA 38..418 10..391 899 49.5 Plus
Rpt4-PB 397 CG3455-PB 14..382 24..389 862 48 Plus
Rpt4R-PB 398 CG7257-PB 30..398 36..403 849 46.3 Plus
Rpt4R-PA 398 CG7257-PA 30..398 36..403 849 46.3 Plus
Rpt5-PA 428 CG10370-PA 109..419 82..392 812 51.8 Plus
Rpt3-PB 413 CG16916-PB 32..409 27..397 807 42.6 Plus
Rpt3-PA 413 CG16916-PA 32..409 27..397 807 42.6 Plus
Rpt3R-PD 405 CG9475-PD 26..401 29..397 784 42 Plus
Rpt3R-PC 405 CG9475-PC 26..401 29..397 784 42 Plus
CG6512-PB 697 CG6512-PB 198..442 147..390 532 44.3 Plus
CG6512-PA 826 CG6512-PA 327..571 147..390 532 44.3 Plus
TER94-PD 759 CG2331-PD 353..656 63..372 520 36.9 Plus
TER94-PA 801 CG2331-PA 395..698 63..372 520 36.9 Plus
TER94-PE 825 CG2331-PE 420..723 63..372 520 36.9 Plus
TER94-PC 826 CG2331-PC 420..723 63..372 520 36.9 Plus
CG5776-PB 799 CG5776-PB 516..791 129..400 513 38.8 Plus
CG5776-PA 799 CG5776-PA 516..791 129..400 513 38.8 Plus
TER94-PD 759 CG2331-PD 142..389 131..381 498 40.1 Plus
TER94-PA 801 CG2331-PA 184..431 131..381 498 40.1 Plus
TER94-PE 825 CG2331-PE 209..456 131..381 498 40.1 Plus
TER94-PC 826 CG2331-PC 209..456 131..381 498 40.1 Plus
smid-PI 910 CG8571-PI 622..854 142..372 477 41.9 Plus
smid-PG 910 CG8571-PG 622..854 142..372 477 41.9 Plus
smid-PH 927 CG8571-PH 639..871 142..372 477 41.9 Plus
smid-PC 943 CG8571-PC 655..887 142..372 477 41.9 Plus
smid-PA 944 CG8571-PA 656..888 142..372 477 41.9 Plus
Spg7-PC 819 CG2658-PC 343..587 150..390 445 39.4 Plus
Spg7-PA 819 CG2658-PA 343..587 150..390 445 39.4 Plus
CG12010-PB 717 CG12010-PB 449..711 147..405 438 35.8 Plus
YME1L-PB 736 CG3499-PB 298..544 146..396 427 40.6 Plus
YME1L-PD 739 CG3499-PD 301..547 146..396 427 40.6 Plus
YME1L-PC 740 CG3499-PC 302..548 146..396 427 40.6 Plus
Pex6-PC 897 CG11919-PC 609..885 141..398 408 35.7 Plus
Pex6-PD 899 CG11919-PD 611..887 141..398 408 35.7 Plus
Kat60-PA 572 CG10229-PA 283..548 138..399 397 38.5 Plus
Kat60-PB 605 CG10229-PB 316..581 138..399 397 38.5 Plus
Pex1-PA 1006 CG6760-PA 696..941 119..372 394 37 Plus
smid-PI 910 CG8571-PI 212..458 143..399 392 33.1 Plus
smid-PG 910 CG8571-PG 212..458 143..399 392 33.1 Plus
smid-PH 927 CG8571-PH 229..475 143..399 392 33.1 Plus
smid-PC 943 CG8571-PC 245..491 143..399 392 33.1 Plus
smid-PA 944 CG8571-PA 246..492 143..399 392 33.1 Plus
kat-60L1-PF 605 CG1193-PF 287..548 108..371 380 38.5 Plus
kat-60L1-PA 605 CG1193-PA 287..548 108..371 380 38.5 Plus
kat-60L1-PH 609 CG1193-PH 291..552 108..371 380 38.5 Plus
kat-60L1-PD 609 CG1193-PD 291..552 108..371 380 38.5 Plus
kat-60L1-PC 669 CG1193-PC 351..612 108..371 380 38.5 Plus
kat-60L1-PB 669 CG1193-PB 351..612 108..371 380 38.5 Plus
kat-60L1-PG 673 CG1193-PG 355..616 108..371 380 38.5 Plus
kat-60L1-PE 673 CG1193-PE 355..616 108..371 380 38.5 Plus
Nsf2-PC 752 CG33101-PC 225..476 150..383 368 37.8 Plus
Nsf2-PB 752 CG33101-PB 225..476 150..383 368 37.8 Plus
Nsf2-PA 752 CG33101-PA 225..476 150..383 368 37.8 Plus
Vps4-PB 442 CG6842-PB 118..353 133..372 365 40.7 Plus
Vps4-PA 442 CG6842-PA 118..353 133..372 365 40.7 Plus
comt-PB 745 CG1618-PB 220..479 150..393 364 37.4 Plus
CG5776-PB 799 CG5776-PB 274..500 150..369 209 27.2 Plus
CG5776-PA 799 CG5776-PA 274..500 150..369 209 27.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:39:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14329-PA 405 GI14329-PA 1..405 1..405 2096 97.8 Plus
Dmoj\GI10644-PA 404 GI10644-PA 14..404 15..405 1848 88.2 Plus
Dmoj\GI22277-PA 439 GI22277-PA 64..431 24..395 909 47 Plus
Dmoj\GI16424-PA 397 GI16424-PA 33..382 43..389 885 50.3 Plus
Dmoj\GI23296-PA 393 GI23296-PA 1..378 7..389 853 44.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:39:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16409-PA 269 GL16409-PA 1..269 137..405 1421 100 Plus
Dper\GL24409-PA 569 GL24409-PA 16..242 15..241 1082 89.4 Plus
Dper\GL20276-PA 397 GL20276-PA 33..382 43..389 878 49.7 Plus
Dper\GL24166-PA 417 GL24166-PA 142..409 128..395 870 57.8 Plus
Dper\GL23259-PA 428 GL23259-PA 129..419 102..392 846 54.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:39:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13327-PA 405 GA13327-PA 1..405 1..405 2123 99 Plus
Dpse\GA26607-PA 405 GA26607-PA 16..405 15..405 1842 90.8 Plus
Dpse\GA12266-PB 433 GA12266-PB 80..418 58..391 927 53.7 Plus
Dpse\GA18789-PA 439 GA18789-PA 64..431 24..395 909 47 Plus
Dpse\GA17461-PA 397 GA17461-PA 33..382 43..389 878 49.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:39:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23074-PA 405 GM23074-PA 1..405 1..405 2136 99.8 Plus
Dsec\GM12144-PA 400 GM12144-PA 13..400 17..405 1789 90 Plus
Dsec\GM23527-PA 439 GM23527-PA 64..431 24..395 909 47 Plus
Dsec\GM25309-PA 398 GM25309-PA 30..383 36..389 862 47.7 Plus
Dsec\GM26527-PA 428 GM26527-PA 129..419 102..392 847 54.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:39:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17527-PA 405 GD17527-PA 1..405 1..405 2136 99.8 Plus
Dsim\GD16958-PA 400 GD16958-PA 13..400 17..405 1788 90 Plus
Dsim\GD18337-PA 439 GD18337-PA 64..431 24..395 909 47 Plus
Dsim\GD14340-PA 398 GD14340-PA 30..383 36..389 866 47.7 Plus
Dsim\GD21035-PA 428 GD21035-PA 129..419 102..392 845 54.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:39:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19383-PA 405 GJ19383-PA 1..405 1..405 2106 98 Plus
Dvir\GJ23001-PA 408 GJ23001-PA 5..408 7..405 1870 87.1 Plus
Dvir\GJ24070-PA 444 GJ24070-PA 69..436 24..395 909 47 Plus
Dvir\GJ15827-PA 397 GJ15827-PA 33..382 43..389 882 50 Plus
Dvir\GJ24151-PA 399 GJ24151-PA 31..384 36..389 857 47.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:39:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16292-PA 405 GK16292-PA 1..405 1..405 2116 98.8 Plus
Dwil\GK10072-PA 433 GK10072-PA 80..418 58..391 924 53.7 Plus
Dwil\GK17804-PA 698 GK17804-PA 270..608 58..391 924 53.7 Plus
Dwil\GK10708-PA 433 GK10708-PA 80..418 58..391 921 53.4 Plus
Dwil\GK11948-PA 439 GK11948-PA 64..431 24..395 909 47 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:39:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17917-PA 405 GE17917-PA 1..405 1..405 2136 99.8 Plus
Dyak\GE23375-PA 401 GE23375-PA 16..401 19..405 1795 91 Plus
Dyak\GE10845-PA 439 GE10845-PA 64..431 24..395 909 47 Plus
Dyak\GE16469-PA 397 GE16469-PA 33..382 43..389 881 50 Plus
Dyak\GE21865-PA 398 GE21865-PA 30..383 36..389 852 47.2 Plus

LD26005.hyp Sequence

Translation from 64 to 1281

> LD26005.hyp
MTVTNRMEIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNE
LNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDK
NIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMV
GGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR
AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEI
DSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL
DPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELM
PGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSI
KKLWK*

LD26005.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
Rpt6-PA 405 CG1489-PA 1..405 1..405 2050 100 Plus
Rpt6R-PA 399 CG2241-PA 12..399 17..405 1787 90.5 Plus
Rpt2-PB 439 CG5289-PB 64..431 24..395 900 47 Plus
Rpt2-PA 439 CG5289-PA 64..431 24..395 900 47 Plus
Rpt1-PA 433 CG1341-PA 38..418 10..391 899 49.5 Plus