BDGP Sequence Production Resources |
Search the DGRC for LD26007
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 260 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | meso18E-RA |
Protein status: | LD26007.pep: gold |
Preliminary Size: | 2454 |
Sequenced Size: | 2494 |
Gene | Date | Evidence |
---|---|---|
CG14233 | 2001-01-01 | Release 2 assignment |
CG14233 | 2001-09-19 | Blastp of sequenced clone |
CG14233 | 2003-01-01 | Sim4 clustering to Release 3 |
meso18E | 2008-04-29 | Release 5.5 accounting |
meso18E | 2008-08-15 | Release 5.9 accounting |
meso18E | 2008-12-18 | 5.12 accounting |
2494 bp (2494 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058570
> LD26007.complete TTAGTTGGAATCTCAGGACGGCGGACTACGGAGAACGGCACACACACGCA CAATCGCCACGCTCTAGACGTTAAGTGTCACAAAGGTTACATTGCGTTCA CACTAGTTACATTTGAAATGCAAACGCCGCCAGGCCAACGCAGCATCCGC AAAAACAAACACAAAAACATAAGCAATAACAACAACAACAACAACGAGCA GAGCCGGAGAGTCCACAATTGAAACACTCGAAAGAATCTGCAGCGGATCG GAGAAGAGGATAGCAGCAGCAGAAATTAGACAATATCACCGTCCAGCATT GCGCCTGCTCAGCAGAATCGGGCCATCCAGAAGCTGCTGACACCACAGAA TTCCCAAATGGATACGAAGAATCCCCCGCCGGTGACGAGCAGCTATCACC ACCAGCGGGCGCCGCGGACGCCGGAATCGTACTTCAACGTGCCGGAGTCG GTGGCCCTGCTGAACATCGTCAAGTCGGAGCGCATCCAGAGCGCGTTCCA GTCGAACCGAAAGAACCATGCCAGCGTGTGGGAGATGGTCGCCGAGGTGC TCAACCGCTTCAGTGCGCGGAAGCGAACGGCCAAGCAGTGCTGCAATCGG TACGAGAACCTCAAGAAGATCTACACGCAGCTGAAAAAGAATCCCGAGCG CCATGTGCGCCGCAACTGGCCGTACATGTTCCTCTTCAAGGAGATCGAGG AGCAGCGCGGCGAGTGCTGGGGATCGAATGGCAAGCGTCTGGCGCTCATA ACCAAAAACCACAACGAGCTATCCTACTACCAGCGCCGACGGCAGGCGGC CGAGCTGGGAGTGCTGCTCAACAAGGACAACCTCACCCCGCACCAGCACA GCCTACTGCAGAGCCTCAGCCAGAGCCAGAGCCAGAGCCACTCGCACGCC CACTCCACGGACTCCTCGCAGAGCGGGAGCAAGCTGGACCGCTTCCTGCC CAATCACTTTGTGGAGGCGCAGCTCAGCGAGGTGGCCGGCCCGGTCGGTG GCTCCGCATCCGGTGTATCCGGCATGTCCGCCGGCGGCTTCGACGAGAAT CCCCTCCAGATGCAGATGGTTCAGGCAGCTGCTGCCGCTGCCGCCGTGGC CGCCCATAAGCGACATGAGCTCCAGATGGCCAGCGTTGGCGGCGTTCAAA TGACGCCCGAAGACGACGACGAGGATGAGCCCCAGCGGCCAGCATTTAAA AACCACCTTCACGTCCTGGGTCATGGCCACGGCCTCGGCTTGGGCCACGC GCCAATGGACGACTCTGGCGAAGCACCCGACTTCGAAAAGGACTGCAATG GAGCACTCAACATGCACCACCAGAACAACAATCACAACGAGAACCACATA TCAATGAAGTCGGAGCCACTTTCGGAGGGCGAGTTCAATCCGGACGACAT CCAGCTGATGCAGACGAACTACAATGGAGCGCAGAACTACTATTCGCCGG GCATGGATGCGAATATACTGCACCCCGATGTGATCGTCGACACGGACATC CTGTCCGACTGCTCCTCATCGACAACGCTGAAGAAGAAGCGCAAGATGTC CACCTCGACCGACGGCGACAGCACCAATTACGAGCTGATCGAGTATCTGA AGCGGCGCGAGAAGCGGGACGAGGAGCTCCTCAAGCGGATGGATGCGCGC GAGGACCGGCTGATGAACCTGCTGGAGCGCACGGTTGTGGCCATTGAAAC GCTGGCCGTAAAGCGGGCACTTACGTTTCCAGTTAATCCAACCAAAGAGA ACGCGCCAGCGACAGCCAGACCGTTGTCTCCGCCACCACCAGAGGCTCAG TTTGCAGCGCCGCCAGCTACGCAGGAGCAGCCCACCAGTCCGGAACGCAA CGGCATTGCGACAGGCAGGAGCGGCACCATTCCCGTCGCGAATCAGGATG CCGCCATTGAGGTGCCAGACGACGGCGATAGCGGTGACGATGTTCAGGTG AAGGACAAGCTGGCCAAGCTGACACCAAAGGCTGGCGGCGATGAACGGAC GGATGGCAGGCAGACGTAGAATATAATGCATCCACTACTCGCTAGATCTA CTTAAGACTTCTACCTACATACATATATATATATATAACCCTTCCCTACC GCCACTCCTCTCACCGGATGGCGGCAGAGGATACAGTGCCAAAGAAGAGC CATGTCTCGAATTTCAGTTGAGATTGCCATTTTTACTTAGAGAGCCTACA CAAGTGCTTAGCGGACGAATGAAACTTAATTGCAATGTTGAATATTAAGC GCCGCAATTTTTGTTGAAGCGATAATCTTAATTCACTTAATTAGCTTTTA GTTAGGCGGAATCCCACCAGCGGATGCCGAATGAATCTCAACAGAGCCGG ATTCACACCGCTACGATAATCTAGTTGGAGCTGCAACGGGGCTCAAATGC ATTTGTGCAGTAACTAAAGCACAAACATTTCATTTTTTTTTTTTGTAATC TAGATGAATACATGTACCATTTACAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19595190..19596240 | 2474..1427 | 5080 | 99.3 | Minus |
chrX | 22417052 | chrX | 19596913..19597913 | 1360..360 | 4885 | 99.2 | Minus |
chrX | 22417052 | chrX | 19600705..19601024 | 361..39 | 1520 | 98.8 | Minus |
chrX | 22417052 | chrX | 19596311..19596379 | 1427..1359 | 345 | 100 | Minus |
chrX | 22417052 | chrX | 19601718..19601755 | 38..1 | 190 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19706406..19707465 | 2486..1427 | 5300 | 100 | Minus |
X | 23542271 | X | 19708150..19709150 | 1360..360 | 5005 | 100 | Minus |
X | 23542271 | X | 19711944..19712268 | 361..37 | 1625 | 100 | Minus |
X | 23542271 | X | 19707536..19707604 | 1427..1359 | 345 | 100 | Minus |
X | 23542271 | X | 19712961..19712998 | 38..1 | 190 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19714504..19715563 | 2486..1427 | 5300 | 100 | Minus |
X | 23527363 | X | 19716248..19717248 | 1360..360 | 5005 | 100 | Minus |
X | 23527363 | X | 19720042..19720366 | 361..37 | 1625 | 100 | Minus |
X | 23527363 | X | 19715634..19715702 | 1427..1359 | 345 | 100 | Minus |
X | 23527363 | X | 19721059..19721096 | 38..1 | 190 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6859 | 140..275 | 147 | 60.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19595190..19596239 | 1428..2474 | 99 | <- | Minus |
chrX | 19596311..19596379 | 1359..1427 | 100 | <- | Minus |
chrX | 19596915..19597912 | 361..1358 | 99 | <- | Minus |
chrX | 19600706..19601025 | 38..360 | 86 | <- | Minus |
chrX | 19601719..19601755 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RA | 1..1662 | 358..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RB | 1..1662 | 358..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RB | 1..1662 | 358..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RA | 1..1662 | 358..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RB | 1..1662 | 358..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RA | 44..2517 | 1..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RA | 44..2517 | 1..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RA | 48..2521 | 1..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RA | 44..2517 | 1..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
meso18E-RA | 48..2521 | 1..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19706418..19707464 | 1428..2474 | 100 | <- | Minus |
X | 19707536..19707604 | 1359..1427 | 100 | <- | Minus |
X | 19708152..19709149 | 361..1358 | 100 | <- | Minus |
X | 19711945..19712267 | 38..360 | 100 | <- | Minus |
X | 19712962..19712998 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19706418..19707464 | 1428..2474 | 100 | <- | Minus |
X | 19707536..19707604 | 1359..1427 | 100 | <- | Minus |
X | 19708152..19709149 | 361..1358 | 100 | <- | Minus |
X | 19711945..19712267 | 38..360 | 100 | <- | Minus |
X | 19712962..19712998 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19706418..19707464 | 1428..2474 | 100 | <- | Minus |
X | 19707536..19707604 | 1359..1427 | 100 | <- | Minus |
X | 19708152..19709149 | 361..1358 | 100 | <- | Minus |
X | 19711945..19712267 | 38..360 | 100 | <- | Minus |
X | 19712962..19712998 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19600451..19601497 | 1428..2474 | 100 | <- | Minus |
arm_X | 19601569..19601637 | 1359..1427 | 100 | <- | Minus |
arm_X | 19602185..19603182 | 361..1358 | 100 | <- | Minus |
arm_X | 19605978..19606300 | 38..360 | 100 | <- | Minus |
arm_X | 19606995..19607031 | 1..37 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19714516..19715562 | 1428..2474 | 100 | <- | Minus |
X | 19715634..19715702 | 1359..1427 | 100 | <- | Minus |
X | 19716250..19717247 | 361..1358 | 100 | <- | Minus |
X | 19720043..19720365 | 38..360 | 100 | <- | Minus |
X | 19721060..19721096 | 1..37 | 100 | Minus |
Translation from 357 to 2018
> LD26007.pep MDTKNPPPVTSSYHHQRAPRTPESYFNVPESVALLNIVKSERIQSAFQSN RKNHASVWEMVAEVLNRFSARKRTAKQCCNRYENLKKIYTQLKKNPERHV RRNWPYMFLFKEIEEQRGECWGSNGKRLALITKNHNELSYYQRRRQAAEL GVLLNKDNLTPHQHSLLQSLSQSQSQSHSHAHSTDSSQSGSKLDRFLPNH FVEAQLSEVAGPVGGSASGVSGMSAGGFDENPLQMQMVQAAAAAAAVAAH KRHELQMASVGGVQMTPEDDDEDEPQRPAFKNHLHVLGHGHGLGLGHAPM DDSGEAPDFEKDCNGALNMHHQNNNHNENHISMKSEPLSEGEFNPDDIQL MQTNYNGAQNYYSPGMDANILHPDVIVDTDILSDCSSSTTLKKKRKMSTS TDGDSTNYELIEYLKRREKRDEELLKRMDAREDRLMNLLERTVVAIETLA VKRALTFPVNPTKENAPATARPLSPPPPEAQFAAPPATQEQPTSPERNGI ATGRSGTIPVANQDAAIEVPDDGDSGDDVQVKDKLAKLTPKAGGDERTDG RQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20467-PA | 554 | GF20467-PA | 1..554 | 1..553 | 1805 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18027-PA | 548 | GG18027-PA | 1..548 | 1..553 | 2461 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12254-PA | 549 | GH12254-PA | 7..450 | 2..447 | 1663 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
meso18E-PD | 553 | CG14233-PD | 1..553 | 1..553 | 2905 | 100 | Plus |
meso18E-PC | 553 | CG14233-PC | 1..553 | 1..553 | 2905 | 100 | Plus |
meso18E-PB | 553 | CG14233-PB | 1..553 | 1..553 | 2905 | 100 | Plus |
meso18E-PA | 553 | CG14233-PA | 1..553 | 1..553 | 2905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11014-PA | 577 | GI11014-PA | 1..206 | 1..213 | 1018 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18303-PA | 584 | GL18303-PA | 1..469 | 1..459 | 1709 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12846-PA | 580 | GA12846-PA | 1..469 | 1..459 | 1712 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22710-PA | 238 | GM22710-PA | 1..230 | 107..336 | 1205 | 97 | Plus |
Dsec\GM16184-PA | 188 | GM16184-PA | 2..188 | 368..553 | 746 | 81.6 | Plus |
Dsec\GM22711-PA | 103 | GM22711-PA | 1..103 | 428..553 | 437 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15613-PA | 545 | GJ15613-PA | 5..463 | 2..453 | 1708 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15888-PA | 610 | GK15888-PA | 43..517 | 2..474 | 1700 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17356-PA | 550 | GE17356-PA | 1..550 | 1..553 | 2461 | 93.7 | Plus |
Translation from 357 to 2018
> LD26007.hyp MDTKNPPPVTSSYHHQRAPRTPESYFNVPESVALLNIVKSERIQSAFQSN RKNHASVWEMVAEVLNRFSARKRTAKQCCNRYENLKKIYTQLKKNPERHV RRNWPYMFLFKEIEEQRGECWGSNGKRLALITKNHNELSYYQRRRQAAEL GVLLNKDNLTPHQHSLLQSLSQSQSQSHSHAHSTDSSQSGSKLDRFLPNH FVEAQLSEVAGPVGGSASGVSGMSAGGFDENPLQMQMVQAAAAAAAVAAH KRHELQMASVGGVQMTPEDDDEDEPQRPAFKNHLHVLGHGHGLGLGHAPM DDSGEAPDFEKDCNGALNMHHQNNNHNENHISMKSEPLSEGEFNPDDIQL MQTNYNGAQNYYSPGMDANILHPDVIVDTDILSDCSSSTTLKKKRKMSTS TDGDSTNYELIEYLKRREKRDEELLKRMDAREDRLMNLLERTVVAIETLA VKRALTFPVNPTKENAPATARPLSPPPPEAQFAAPPATQEQPTSPERNGI ATGRSGTIPVANQDAAIEVPDDGDSGDDVQVKDKLAKLTPKAGGDERTDG RQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
meso18E-PD | 553 | CG14233-PD | 1..553 | 1..553 | 2905 | 100 | Plus |
meso18E-PC | 553 | CG14233-PC | 1..553 | 1..553 | 2905 | 100 | Plus |
meso18E-PB | 553 | CG14233-PB | 1..553 | 1..553 | 2905 | 100 | Plus |
meso18E-PA | 553 | CG14233-PA | 1..553 | 1..553 | 2905 | 100 | Plus |