![]() | BDGP Sequence Production Resources |
Search the DGRC for LD26240
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 262 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1868-RA |
Protein status: | LD26240.pep: wuzgold |
Preliminary Size: | 2312 |
Sequenced Size: | 2324 |
Gene | Date | Evidence |
---|---|---|
CG1868 | 2001-07-04 | Blastp of sequenced clone |
CG1868 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1868 | 2008-04-29 | Release 5.5 accounting |
CG1868 | 2008-08-15 | Release 5.9 accounting |
CG1868 | 2008-12-18 | 5.12 accounting |
2324 bp (2324 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051734
> LD26240.complete AACGTTTGGCAAGAACTTTCTCCCAGCAGAACGAACTGATAACCCTGAAT GAGAACTACAAGGATGAGTTCGAAACCTTCAAGTCATTGGCATCCATGCC AGCGGACATTCTGCAGATATTCCAGAAGCTGGCGCTCGACTTGCTGCAGG ATTTGGAGCAACCGGTTGACAGGAAAGGATGCGCAGAACGTTCGAAAAAT CTGCGCGAGGAGGGAAACCTTATGTTCAAAGAGTCCGCATCGGGATCCTC CAAGGACTCGGTTCTGAAAGCATGCAGGCTTTACTCGGAAGCCGTTTTCG AGGCTGAGAATGCTGTGGAAGAGCTGTCGCTGGCGTTTGCCAACCGAGGA ATAGCTTTGCAGGAGTACGGGTACTACAGAGAAGCCTATGACGACTGCTC CAATGCGCTGGAGTGCGGATACCCGGAAAGGCTGCGGCACAAGGTGATCA TGCGGCAGGCCTTCTGCGCCTGGAAGCTGAAGAAGATTGCTTCGCTAGAG GAGCATTTGGATTATCTCGGGCAGCTGCAGCTTAAAGAGAGCTTTGAGCA GCAGCTGGAAGACCTGAAGCAGAAACTGGAGCTGCTAAAGAACCAACCCA GAGAGCAGGAAACACAAGGGAAAGTGGTGGATAAATCTCTAGGGGAAATC CTTACAGATCCTGGTCCCCGTGGTCGATATATGGTGGCTAAGGAAGCGAT TAGCAAAGGCAACGTAATCTTTTCAGAGCGCGCCTCCTGCTTTGTTCCAT TGGAGCAACTGCTTATTTGCCAGCAGTGCGCCGCCACCTTAATGAGCGCA CCCATACCCTGCCCCAATTGCCATCAGCGGGTAGTCTACTGCTCTAGGAA GTGTCGGGAGGCGCACTCGGCCATCCACAAATTCGAGTGTGCCGCCTACA GAAAGGATATCCTCCGACTTTTGGGCATTTCGCATTTGGCCTTGCGATTG CTTTTGACTTACATTCCCTACATAAGGCCTCATTTGCAAGAGATGACCAG TGCAAAGGGTATGTGGGAAGAAATAATGAATCTGTCCCGAAAACCGGAAG AGAGTGAAAACGCTCCAGAGTATTTGCGAAGCCTGCGCATGGTCAGTCAA CTGGATCAGGCTATCGATGAGGAGTTAAATTACCACATCCTCTGTGCCAA TCTCCTTCAACTTTACCTGAAAGAGCACACCGATTTCTACGATCAGTTCC ACTCATTGCCAGCCAGCATTGAAGATTGGCAACTGATTATATCAGCACTG ATTCTGCGCTTCGCCGGCCAGTTGCTGGCGAATGGGCATGTAGGCGATGC GTTGCTCGGAGTTGGCATGGAGCCAAAAGAGTTTGTCATGCTGCAGCCGG AGTTGTGGCAAAAGCCTCGACACCTGAAACGCGGCCAGCTGCACAATCTA TCCCACTCGGATCCTATCACGGCTATCAATCTGCCCTACTTGAGCTTGTG CAACCACGCCTGCGAACCCTCAATTCGCACCAAGTTCGATGGATGTTCCG TGGTGAACTACGCTGCAAAGGACATTCTAGAAGGCGAAGAGATCTTCAAT TGCTATACAATGGATTACAGAAACAGTTTAAAGCTACAACGATCTCATCC GCTCAAGGCCATCTACAAATTTGAGTGCACATGCGCTAAGTGCACACGAA CTGATCCCGACCAGAACTATCTTTCTTTTCATCGTTATCGCTGCGAAAAG CCCAACTGCCGACAAGAATTTCTGCCAGACGCCAAAGTTCAGCAGAATAA TCTTCGCTGGTGGCTGAGATGCAATGCAGAGAAACCGATTACTTGCACGG TGTGCCACGAGCTTCAACATTTCGCCTGGTACAATGAGTTCCTTGGACTC ATCGGCAGCAGTGCCGATTCGTCAAAAAGGCAGGCGCTGTTCAAGGCATT CGATGATCTAGACAAGTGGCTTGTGGATCACCACAGCTTAAAAAGAATTA TGGCCGAGGAACTGGTAACAGCCTGTTTTTATGAGATAGATGGAGGCACT TCATTGGATGAGTTTGAGTATGAAGATCTGGCGAGGATTATCCGCAAACA GCTGGAAGGCATTGCTGCGCAGTGTGGCGATAACTCAACGGAATACATTG CTCGCATGACCTATTTGTGGGATATCATAGCCCAGAAGAAATGCCGCACC GATAGAAAGGAACTGCTAGAGATGAAAGGTAAGGTGGATTATCTGGCTAG CGAGCATCGCGAGGTTTTCTTGAACTATTACAACGATTTTATTGAGCAAT AATGTAAATAACGATATACACGCATTAAATTCGCTAGTTTCGAGCTACAA GCATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5470000..5471020 | 1670..650 | 5105 | 100 | Minus |
chr2R | 21145070 | chr2R | 5471076..5471724 | 649..1 | 3170 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 5469623..5469945 | 1993..1671 | 1615 | 100 | Minus |
chr2R | 21145070 | chr2R | 5469256..5469569 | 2305..1992 | 1570 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9582505..9583525 | 1670..650 | 5105 | 100 | Minus |
2R | 25286936 | 2R | 9583581..9584229 | 649..1 | 3245 | 100 | Minus |
2R | 25286936 | 2R | 9582128..9582450 | 1993..1671 | 1615 | 100 | Minus |
2R | 25286936 | 2R | 9581758..9582074 | 2308..1992 | 1585 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9583704..9584724 | 1670..650 | 5105 | 100 | Minus |
2R | 25260384 | 2R | 9584780..9585428 | 649..1 | 3245 | 100 | Minus |
2R | 25260384 | 2R | 9583327..9583649 | 1993..1671 | 1615 | 100 | Minus |
2R | 25260384 | 2R | 9582957..9583273 | 2308..1992 | 1585 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5469256..5469568 | 1993..2305 | 100 | <- | Minus |
chr2R | 5469624..5469945 | 1671..1992 | 100 | <- | Minus |
chr2R | 5470000..5471020 | 650..1670 | 100 | <- | Minus |
chr2R | 5471076..5471724 | 1..649 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RB | 5..2256 | 1..2252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RB | 5..2256 | 1..2252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RB | 5..2256 | 1..2252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RB | 5..2256 | 1..2252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RB | 5..2256 | 1..2252 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RA | 1..2305 | 1..2305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RA | 1..2305 | 1..2305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RB | 95..2399 | 1..2305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RA | 1..2305 | 1..2305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1868-RB | 95..2399 | 1..2305 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9581761..9582073 | 1993..2305 | 100 | <- | Minus |
2R | 9582129..9582450 | 1671..1992 | 100 | <- | Minus |
2R | 9582505..9583525 | 650..1670 | 100 | <- | Minus |
2R | 9583581..9584229 | 1..649 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9581761..9582073 | 1993..2305 | 100 | <- | Minus |
2R | 9582129..9582450 | 1671..1992 | 100 | <- | Minus |
2R | 9582505..9583525 | 650..1670 | 100 | <- | Minus |
2R | 9583581..9584229 | 1..649 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9581761..9582073 | 1993..2305 | 100 | <- | Minus |
2R | 9582129..9582450 | 1671..1992 | 100 | <- | Minus |
2R | 9582505..9583525 | 650..1670 | 100 | <- | Minus |
2R | 9583581..9584229 | 1..649 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5469266..5469578 | 1993..2305 | 100 | <- | Minus |
arm_2R | 5469634..5469955 | 1671..1992 | 100 | <- | Minus |
arm_2R | 5470010..5471030 | 650..1670 | 100 | <- | Minus |
arm_2R | 5471086..5471734 | 1..649 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9582960..9583272 | 1993..2305 | 100 | <- | Minus |
2R | 9583328..9583649 | 1671..1992 | 100 | <- | Minus |
2R | 9583704..9584724 | 650..1670 | 100 | <- | Minus |
2R | 9584780..9585428 | 1..649 | 100 | Minus |
Translation from 2 to 2251
> LD26240.hyp RLARTFSQQNELITLNENYKDEFETFKSLASMPADILQIFQKLALDLLQD LEQPVDRKGCAERSKNLREEGNLMFKESASGSSKDSVLKACRLYSEAVFE AENAVEELSLAFANRGIALQEYGYYREAYDDCSNALECGYPERLRHKVIM RQAFCAWKLKKIASLEEHLDYLGQLQLKESFEQQLEDLKQKLELLKNQPR EQETQGKVVDKSLGEILTDPGPRGRYMVAKEAISKGNVIFSERASCFVPL EQLLICQQCAATLMSAPIPCPNCHQRVVYCSRKCREAHSAIHKFECAAYR KDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAKGMWEEIMNLSRKPEE SENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFH SLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPE LWQKPRHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFDGCSV VNYAAKDILEGEEIFNCYTMDYRNSLKLQRSHPLKAIYKFECTCAKCTRT DPDQNYLSFHRYRCEKPNCRQEFLPDAKVQQNNLRWWLRCNAEKPITCTV CHELQHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKWLVDHHSLKRIM AEELVTACFYEIDGGTSLDEFEYEDLARIIRKQLEGIAAQCGDNSTEYIA RMTYLWDIIAQKKCRTDRKELLEMKGKVDYLASEHREVFLNYYNDFIEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1868-PC | 751 | CG1868-PC | 3..751 | 1..749 | 3962 | 100 | Plus |
CG1868-PB | 751 | CG1868-PB | 3..751 | 1..749 | 3962 | 100 | Plus |
dao-PB | 882 | CG15267-PB | 142..865 | 40..747 | 868 | 31.3 | Plus |
dao-PA | 882 | CG15267-PA | 142..865 | 40..747 | 868 | 31.3 | Plus |
dao-PC | 808 | CG15267-PC | 142..775 | 40..658 | 699 | 31 | Plus |
Translation from 95 to 2251
> LD26240.pep MPADILQIFQKLALDLLQDLEQPVDRKGCAERSKNLREEGNLMFKESASG SSKDSVLKACRLYSEAVFEAENAVEELSLAFANRGIALQEYGYYREAYDD CSNALECGYPERLRHKVIMRQAFCAWKLKKIASLEEHLDYLGQLQLKESF EQQLEDLKQKLELLKNQPREQETQGKVVDKSLGEILTDPGPRGRYMVAKE AISKGNVIFSERASCFVPLEQLLICQQCAATLMSAPIPCPNCHQRVVYCS RKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQEM TSAKGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILC ANLLQLYLKEHTDFYDQFHSLPASIEDWQLIISALILRFAGQLLANGHVG DALLGVGMEPKEFVMLQPELWQKPRHLKRGQLHNLSHSDPITAINLPYLS LCNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCYTMDYRNSLKLQRS HPLKAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPDAKVQQ NNLRWWLRCNAEKPITCTVCHELQHFAWYNEFLGLIGSSADSSKRQALFK AFDDLDKWLVDHHSLKRIMAEELVTACFYEIDGGTSLDEFEYEDLARIIR KQLEGIAAQCGDNSTEYIARMTYLWDIIAQKKCRTDRKELLEMKGKVDYL ASEHREVFLNYYNDFIEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12496-PA | 751 | GF12496-PA | 34..748 | 1..718 | 2489 | 64.4 | Plus |
Dana\GF14344-PA | 887 | GF14344-PA | 147..870 | 9..716 | 855 | 31.4 | Plus |
Dana\GF12554-PA | 660 | GF12554-PA | 77..560 | 44..537 | 284 | 26.2 | Plus |
Dana\GF12292-PA | 574 | GF12292-PA | 64..491 | 29..516 | 235 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25277-PA | 750 | GG25277-PA | 34..747 | 1..718 | 3181 | 82.5 | Plus |
Dere\GG25152-PA | 881 | GG25152-PA | 141..864 | 9..716 | 821 | 30.6 | Plus |
Dere\GG20202-PA | 660 | GG20202-PA | 77..560 | 44..537 | 263 | 25.7 | Plus |
Dere\GG20247-PA | 573 | GG20247-PA | 64..491 | 29..516 | 224 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21957-PA | 758 | GH21957-PA | 34..753 | 1..718 | 2013 | 52.5 | Plus |
Dgri\GH21386-PA | 664 | GH21386-PA | 74..564 | 33..537 | 239 | 24.8 | Plus |
Dgri\GH20862-PA | 574 | GH20862-PA | 64..491 | 29..516 | 231 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Smyd4-1-PC | 751 | CG1868-PC | 34..751 | 1..718 | 3808 | 100 | Plus |
Smyd4-1-PB | 751 | CG1868-PB | 34..751 | 1..718 | 3808 | 100 | Plus |
dao-PB | 882 | CG15267-PB | 142..865 | 9..716 | 868 | 31.3 | Plus |
dao-PA | 882 | CG15267-PA | 142..865 | 9..716 | 868 | 31.3 | Plus |
dao-PC | 808 | CG15267-PC | 142..775 | 9..627 | 699 | 31 | Plus |
Smyd4-3-PA | 660 | CG7759-PA | 78..560 | 45..537 | 264 | 26.5 | Plus |
Smyd4-4-PA | 573 | CG8378-PA | 64..496 | 29..521 | 227 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19663-PA | 762 | GI19663-PA | 34..750 | 1..718 | 1585 | 44 | Plus |
Dmoj\GI20970-PA | 574 | GI20970-PA | 64..491 | 29..516 | 241 | 23.3 | Plus |
Dmoj\GI18563-PA | 666 | GI18563-PA | 77..566 | 44..537 | 210 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20110-PA | 760 | GL20110-PA | 34..759 | 1..718 | 2339 | 59.8 | Plus |
Dper\GL26038-PA | 890 | GL26038-PA | 150..873 | 9..716 | 808 | 30.9 | Plus |
Dper\GL11690-PA | 660 | GL11690-PA | 77..560 | 44..537 | 236 | 24.2 | Plus |
Dper\GL16991-PA | 574 | GL16991-PA | 64..491 | 29..516 | 224 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24934-PA | 760 | GA24934-PA | 34..759 | 1..718 | 2341 | 59.9 | Plus |
Dpse\GA13614-PA | 890 | GA13614-PA | 150..873 | 9..716 | 808 | 30.9 | Plus |
Dpse\GA20567-PA | 660 | GA20567-PA | 77..560 | 44..537 | 235 | 24.4 | Plus |
Dpse\GA20567-PB | 567 | GA20567-PB | 3..467 | 62..537 | 225 | 24.1 | Plus |
Dpse\GA21031-PA | 574 | GA21031-PA | 64..491 | 29..516 | 224 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20595-PA | 751 | GM20595-PA | 34..751 | 1..718 | 3604 | 92.6 | Plus |
Dsec\GM15982-PA | 882 | GM15982-PA | 142..865 | 9..716 | 849 | 31.4 | Plus |
Dsec\GM21288-PA | 660 | GM21288-PA | 77..560 | 44..537 | 259 | 26.1 | Plus |
Dsec\GM21333-PA | 573 | GM21333-PA | 64..496 | 29..521 | 223 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10068-PA | 751 | GD10068-PA | 34..751 | 1..718 | 3654 | 93.5 | Plus |
Dsim\GD23999-PA | 882 | GD23999-PA | 142..865 | 9..716 | 845 | 31.3 | Plus |
Dsim\GD10796-PA | 646 | GD10796-PA | 77..560 | 44..537 | 261 | 25.6 | Plus |
Dsim\GD10841-PA | 694 | GD10841-PA | 64..477 | 29..505 | 179 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15028-PA | 723 | GJ15028-PA | 1..719 | 1..717 | 1685 | 47 | Plus |
Dvir\GJ20689-PA | 574 | GJ20689-PA | 64..491 | 29..516 | 237 | 23.5 | Plus |
Dvir\GJ20356-PA | 662 | GJ20356-PA | 77..562 | 44..537 | 230 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21490-PA | 745 | GK21490-PA | 38..740 | 7..718 | 1719 | 48 | Plus |
Dwil\GK18318-PA | 881 | GK18318-PA | 140..864 | 9..716 | 852 | 30.4 | Plus |
Dwil\GK21416-PA | 661 | GK21416-PA | 77..561 | 44..537 | 233 | 25.1 | Plus |
Dwil\GK19653-PA | 574 | GK19653-PA | 66..491 | 31..516 | 204 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22225-PA | 753 | GE22225-PA | 34..750 | 1..718 | 3095 | 81.8 | Plus |
Dyak\GE20902-PA | 886 | GE20902-PA | 146..869 | 9..716 | 845 | 31.1 | Plus |
Dyak\GE12361-PA | 660 | GE12361-PA | 77..560 | 44..537 | 260 | 25.9 | Plus |
Dyak\GE12406-PA | 573 | GE12406-PA | 64..491 | 29..516 | 224 | 22.6 | Plus |