BDGP Sequence Production Resources |
Search the DGRC for LD26258
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 262 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | spz5-RA |
Protein status: | LD26258.pep: gold |
Preliminary Size: | 2100 |
Sequenced Size: | 2005 |
Gene | Date | Evidence |
---|---|---|
CG9972 | 2001-01-01 | Release 2 assignment |
CG9972 | 2001-07-04 | Blastp of sequenced clone |
CG9972 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9972 | 2008-04-29 | Release 5.5 accounting |
CG9972 | 2008-08-15 | Release 5.9 accounting |
CG9972 | 2008-12-18 | 5.12 accounting |
2005 bp (2005 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051735
> LD26258.complete CCGCCGTGAGCATTGGCAAACGCGTGAAACGGAAAAGACGAAAACGAAAT CGAAATCGAAAACCTAAAGTCCAAAAACCGAAATATCCGCGCTCTTCGGT ACGTGTTAAGTTTTTTAATTAGTAGAATTTTCAAGTGAGTGTTCGGTGGC AAAAAAAGAGAAAATATTTCACTGAAATACAAAGAGCATAGCTAAGCTCG ACAAAAGTGCACATAGTGATCAAAAACATTTGCCAAATACTGTGAAGCAA AAACCCAAACAAATCTACAAGCCGCACACTAGGTTTCCGAATTCACGTTG AAGACACTGGCTGAATCGCAATCGAGTCAAATGCAAATGCAAATCGACGG CGAATGAATTGACAATGACAAAAAGTATTAAACGTCCGCCCCCCTTTAGT TGTAAACAAGTTCTTCTTACCTATGTGATATTAGCTTATACAGTAGCCGC CCACAGCTCGCCCCCGCCATGTGGCCTTTATGGAGCCCCGCCTTGCCAGT TCCTCCCGGCGCCACCTGGACAAACGCCCACCTGTGCCCGTCCAGGAAAG ACGTACTGCGAGCACGCCGATAACTACCCCACGTATCTCATAAAGAGCCT CGTTCGAAAGTGGGGCTATGAGGCCGCCACTCTGTTGGTGGACGAAACCT GGGAAGATTTTGCGGCTGTGGCGTGGCACGATACTCCCGTCTTCTACGAT CCCAAGTCCATCTTCCCGCCCCGGGATCCCGCTGCCCAGGACTTTAATGG ATATAGTTATCAGACACCCTTCGGAGGTAATCCCCAGAGACCGTCTGGGG GTGGAAACCCGCTCTTTGTCAGCAATCCCTCTACGGAAGCACCCACGTAT CTTCTGTACACCTCCTCCGGTGGAGGTCATCGCTCGGGTCACCGGTATAA CTCCCAGGGCGGAGGCACCTCATCTTCTGGCGGTCACTTGTACATCAATC AGAGTGACAAGTCGACTCCCTACAATGCCACGCTCTGGCTGAAGCGCTTG GTCAGGGATCTCAGTCGGAAGCAGAGGCAACCCGACGAGGTTCAAGCGGA GGTGGTGGAGCCGGTGAACGAGCAGACAGAGGAGGCCGAGGAACAGGACA ACCCGGCAGAGGATCACCCACAAAGCAAGCGCGATGTCTCGCTCAACATG GATCTCTTGGATATCGTGGGCGTGGAAGCCCCCAATCCGCTGAAGAAGCG TTCGAGGACAAAGCGCCAAAGTCCGGGGCGCTCCACCCTCTGCCAGACGA CATCGCAGTTCATCACCCCGCAGGCGGCACTGAATAGCCGCGGAAACTGG ATGTTTGTGGTCAACGAGCAGAACACCGCTCGCCAAATGGTCAAGGCGGA GCTTTGCGCCTCGAACACCTGCTCGAACCTGTGCGAATTGCCCAACGGCT ACAACTCGAGATGCGAGCAGAAGTTTGTGCAAAAACGCTTAATTGCGCTC CAGGGCAACGGGCAGAATCTGTACACGGACACGTTCTGGTTTCCCAGTTG CTGTGTCTGCACGATAGCCGCCAATTAAATGTGTCCAGCGGACGAAGGAC GAAGGACGAGACCATACTCTCAGCGGCGATTTTGGCAAATTCATATCTGA TAACTATAAATGATACGAAAACACACACAACACCCACACATGAAACACTC AATATCTCTCATGTTGTTACACAAACACACAATGTAGTTCTTAAAAATGT AATTTAAAATCAAAAACATCGAGTGAGGCATGCAAAATTGGATTTATGCC CACACAATCCCTTTGAGTTTGCATAGTAGCATTAGTCTTACCCTGTGAGC GATCTAATGGATATCAAATAAACAAATATTCCACGCGATGCTTTTTCAAG TTAAACGAGAGGCACTATTTTATTTGGTCTAAATAAGTTTAAATAAATAT GTATAAATTCACCATTAAGCTCATAAGCTCATAAATCTCCATAAATCTGC AATAATTAAAAAGAATTCATTAAAGTTTAAAAAAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2883061..2883677 | 1978..1360 | 2940 | 98.7 | Minus |
chr3L | 24539361 | chr3L | 2885319..2885831 | 1359..847 | 2520 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 2891278..2891562 | 284..1 | 1345 | 98.9 | Minus |
chr3L | 24539361 | chr3L | 2886118..2886383 | 848..583 | 1315 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 2888301..2888458 | 584..427 | 775 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 2888514..2888660 | 427..281 | 735 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 2883638..2884259 | 1981..1360 | 3110 | 100 | Minus |
3L | 28110227 | 3L | 2885896..2886408 | 1359..847 | 2565 | 100 | Minus |
3L | 28110227 | 3L | 2891865..2892148 | 284..1 | 1420 | 100 | Minus |
3L | 28110227 | 3L | 2886686..2886952 | 849..583 | 1335 | 100 | Minus |
3L | 28110227 | 3L | 2888888..2889045 | 584..427 | 790 | 100 | Minus |
3L | 28110227 | 3L | 2889101..2889247 | 427..281 | 735 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2883638..2884259 | 1981..1360 | 3110 | 100 | Minus |
3L | 28103327 | 3L | 2885896..2886408 | 1359..847 | 2565 | 100 | Minus |
3L | 28103327 | 3L | 2891865..2892148 | 284..1 | 1420 | 100 | Minus |
3L | 28103327 | 3L | 2886686..2886952 | 849..583 | 1335 | 100 | Minus |
3L | 28103327 | 3L | 2888888..2889045 | 584..427 | 790 | 100 | Minus |
3L | 28103327 | 3L | 2889101..2889247 | 427..281 | 735 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2883061..2883677 | 1360..1978 | 98 | <- | Minus |
chr3L | 2885319..2885831 | 847..1359 | 99 | <- | Minus |
chr3L | 2886120..2886383 | 583..846 | 99 | <- | Minus |
chr3L | 2888303..2888457 | 428..582 | 99 | <- | Minus |
chr3L | 2888514..2888658 | 283..427 | 100 | <- | Minus |
chr3L | 2891280..2891562 | 1..282 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9972-RA | 1..1164 | 365..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz5-RA | 1..1164 | 365..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz5-RA | 1..1164 | 365..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9972-RA | 1..1164 | 365..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz5-RA | 1..1164 | 365..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9972-RA | 17..1994 | 1..1978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz5-RA | 17..1994 | 1..1978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz5-RA | 19..1996 | 1..1978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9972-RA | 17..1994 | 1..1978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spz5-RA | 19..1996 | 1..1978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2883641..2884259 | 1360..1978 | 100 | <- | Minus |
3L | 2885896..2886408 | 847..1359 | 100 | <- | Minus |
3L | 2886689..2886952 | 583..846 | 100 | <- | Minus |
3L | 2888890..2889044 | 428..582 | 100 | <- | Minus |
3L | 2889101..2889245 | 283..427 | 100 | <- | Minus |
3L | 2891867..2892148 | 1..282 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2883641..2884259 | 1360..1978 | 100 | <- | Minus |
3L | 2885896..2886408 | 847..1359 | 100 | <- | Minus |
3L | 2886689..2886952 | 583..846 | 100 | <- | Minus |
3L | 2888890..2889044 | 428..582 | 100 | <- | Minus |
3L | 2889101..2889245 | 283..427 | 100 | <- | Minus |
3L | 2891867..2892148 | 1..282 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2883641..2884259 | 1360..1978 | 100 | <- | Minus |
3L | 2885896..2886408 | 847..1359 | 100 | <- | Minus |
3L | 2886689..2886952 | 583..846 | 100 | <- | Minus |
3L | 2888890..2889044 | 428..582 | 100 | <- | Minus |
3L | 2889101..2889245 | 283..427 | 100 | <- | Minus |
3L | 2891867..2892148 | 1..282 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2883641..2884259 | 1360..1978 | 100 | <- | Minus |
arm_3L | 2885896..2886408 | 847..1359 | 100 | <- | Minus |
arm_3L | 2886689..2886952 | 583..846 | 100 | <- | Minus |
arm_3L | 2888890..2889044 | 428..582 | 100 | <- | Minus |
arm_3L | 2889101..2889245 | 283..427 | 100 | <- | Minus |
arm_3L | 2891867..2892148 | 1..282 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2891867..2892148 | 1..282 | 100 | Minus | |
3L | 2883641..2884259 | 1360..1978 | 100 | <- | Minus |
3L | 2885896..2886408 | 847..1359 | 100 | <- | Minus |
3L | 2886689..2886952 | 583..846 | 100 | <- | Minus |
3L | 2888890..2889044 | 428..582 | 100 | <- | Minus |
3L | 2889101..2889245 | 283..427 | 100 | <- | Minus |
Translation from 364 to 1527
> LD26258.pep MTKSIKRPPPFSCKQVLLTYVILAYTVAAHSSPPPCGLYGAPPCQFLPAP PGQTPTCARPGKTYCEHADNYPTYLIKSLVRKWGYEAATLLVDETWEDFA AVAWHDTPVFYDPKSIFPPRDPAAQDFNGYSYQTPFGGNPQRPSGGGNPL FVSNPSTEAPTYLLYTSSGGGHRSGHRYNSQGGGTSSSGGHLYINQSDKS TPYNATLWLKRLVRDLSRKQRQPDEVQAEVVEPVNEQTEEAEEQDNPAED HPQSKRDVSLNMDLLDIVGVEAPNPLKKRSRTKRQSPGRSTLCQTTSQFI TPQAALNSRGNWMFVVNEQNTARQMVKAELCASNTCSNLCELPNGYNSRC EQKFVQKRLIALQGNGQNLYTDTFWFPSCCVCTIAAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10234-PA | 390 | GF10234-PA | 1..390 | 1..387 | 1619 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14494-PA | 387 | GG14494-PA | 1..387 | 1..387 | 1880 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14578-PA | 391 | GH14578-PA | 1..391 | 1..387 | 1389 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz5-PA | 387 | CG9972-PA | 1..387 | 1..387 | 2110 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13903-PA | 410 | GI13903-PA | 1..410 | 1..387 | 1371 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22428-PA | 117 | GL22428-PA | 1..117 | 262..387 | 522 | 82.5 | Plus |
Dper\GL22427-PA | 187 | GL22427-PA | 4..151 | 74..219 | 488 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22158-PA | 395 | GA22158-PA | 1..395 | 1..387 | 1589 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14097-PA | 387 | GM14097-PA | 1..387 | 1..387 | 2030 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13369-PA | 387 | GD13369-PA | 1..387 | 1..387 | 2022 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11759-PA | 398 | GJ11759-PA | 1..398 | 1..387 | 1382 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17627-PA | 399 | GK17627-PA | 1..399 | 1..387 | 1489 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21683-PA | 388 | GE21683-PA | 1..388 | 1..387 | 1895 | 93.6 | Plus |
Translation from 364 to 1527
> LD26258.hyp MTKSIKRPPPFSCKQVLLTYVILAYTVAAHSSPPPCGLYGAPPCQFLPAP PGQTPTCARPGKTYCEHADNYPTYLIKSLVRKWGYEAATLLVDETWEDFA AVAWHDTPVFYDPKSIFPPRDPAAQDFNGYSYQTPFGGNPQRPSGGGNPL FVSNPSTEAPTYLLYTSSGGGHRSGHRYNSQGGGTSSSGGHLYINQSDKS TPYNATLWLKRLVRDLSRKQRQPDEVQAEVVEPVNEQTEEAEEQDNPAED HPQSKRDVSLNMDLLDIVGVEAPNPLKKRSRTKRQSPGRSTLCQTTSQFI TPQAALNSRGNWMFVVNEQNTARQMVKAELCASNTCSNLCELPNGYNSRC EQKFVQKRLIALQGNGQNLYTDTFWFPSCCVCTIAAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spz5-PA | 387 | CG9972-PA | 1..387 | 1..387 | 2110 | 100 | Plus |