BDGP Sequence Production Resources |
Search the DGRC for LD26546
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 265 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | l(1)G0320-RA |
Protein status: | LD26546.pep: gold |
Preliminary Size: | 1360 |
Sequenced Size: | 1247 |
Gene | Date | Evidence |
---|---|---|
CG2994 | 2001-01-01 | Release 2 assignment |
CG32701 | 2001-11-29 | Blastp of sequenced clone |
CG32701 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0320 | 2008-04-29 | Release 5.5 accounting |
l(1)G0320 | 2008-08-15 | Release 5.9 accounting |
l(1)G0320 | 2008-12-18 | 5.12 accounting |
1247 bp (1247 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069541
> LD26546.complete CACCGAAGCCCGTCACTTCTTCATTTTCACTCGATCGGGAAGGTTGTGTG TGCGTGCGTTTTTCCCTCAGCCGATTTCCCAGCCAAATTTCCGTGTGTGC GCCGCGCATTCGATTGCATTTGGAGCCCCGACGACATTATAAAACAGCCA ACAAGATGAGGCATCTGATGTTCCTAATGCTGATGGTCCTGCCCATCGTC ATCTGCACCTTCTCGGCGCCCAACAAGTTTGGAGCCTATGCCGCCGAGGC CGTGGAGGACGACCTGGTGGACGTGGAGGGCGAGGAGGGTGCCGTTACTG GCGAGGATGCAGAAGCGGACGAGGATAGCGACACGGGCAGCAGCAGTTCG CCGAATGCGGACACCTATCTGTTATTCACGAAACCCCTGTACACACCTGG CCAGCAGCTGGATCTGCCCGGCGGCAAACCCGTCGAGTTCCTGATTGGAT TCACCAACAAGGGAGCCGAGGAATTCGTGATCGAGACGGTGGAGGCCTCC TTCCGCTATCCCATGGACTTCAACTACTTCATCCAGAACTTCTCGGCGGT GGCCTACAATCGTGAGGTGAAGCCCGGCTTTGAGTCGACCGTGTCGTACA CCTTCCTGCCCTCGGATCAGTTTGCCGGCCGTCCATTTGGACTGAACATT GCACTGGCCTACCGCGATGCCAATGGTATTCAGTACAACGAGGCCGTGTT CAATGAGACCGTTCTGATTTCGGAGGTCGATGAGGGTCTGGATGGCGAGA CTTTCTTCCTGTACGTCCTGCTGGCGGGCATTGTGGTCCTGCTACTGGTC ATCGGACAGCAATATCTGCTCGGCAGCTCTGGCAAGAGGAAGCGTGCCGC TGCCAAGAAGGTGATCGAAACCGGCACGGCCAACGACAGCACCATCGACT ACGATTGGGTGCCACAGGAGACGCTGCGTGCGCTGCAGAAGTCGCCGCCC AAGTCCAAAACGCCCAAGACCTCGCCCAAGCCCACCAAGCCGGCCAGTCC CAAGGCGGCCAGCCAGCAGAGTCCCAAGCAGCGCAAGGTCAAGCGTTCCG CTGGCGATGATTAAGTTCAAATCCGCTCAAGACTGCACATATCCCAAACA CCATCGAAAGCGGTAGCCATAACATCGGCTGCCGAAGGAGCAGTAACAGC AAGATCCCACTCCCTCCCGTCATTTTCATCCTGTAGGGAGAAAAGCAAAA AGTTTCGTAATTAATTAGTTATGTACATCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0320.a | 1979 | l(1)G0320.a | 115..1344 | 1..1230 | 6150 | 100 | Plus |
l(1)G0320-RA | 1512 | l(1)G0320-RA | 115..1344 | 1..1230 | 6150 | 100 | Plus |
CG32700.a | 3584 | CG32700.a | 161..1171 | 220..1230 | 5055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9445165..9445383 | 1..219 | 100 | Minus | |
chrX | 9443487..9444496 | 220..1229 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..909 | 156..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..909 | 156..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..909 | 156..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..909 | 156..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..909 | 156..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..1229 | 1..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..1229 | 1..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..1220 | 10..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 1..1229 | 1..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0320-RA | 81..1309 | 1..1229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9553452..9553670 | 1..219 | 100 | Minus | |
X | 9551774..9552783 | 220..1229 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9553452..9553670 | 1..219 | 100 | Minus | |
X | 9551774..9552783 | 220..1229 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9553452..9553670 | 1..219 | 100 | Minus | |
X | 9551774..9552783 | 220..1229 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9445807..9446816 | 220..1229 | 100 | <- | Minus |
arm_X | 9447485..9447703 | 1..219 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9559872..9560881 | 220..1229 | 100 | <- | Minus |
X | 9561550..9561768 | 1..219 | 100 | Minus |
Translation from 2 to 1063
> LD26546.hyp PKPVTSSFSLDREGCVCVRFSLSRFPSQISVCAPRIRLHLEPRRHYKTAN KMRHLMFLMLMVLPIVICTFSAPNKFGAYAAEAVEDDLVDVEGEEGAVTG EDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGF TNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYT FLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGET FFLYVLLAGIVVLLLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDY DWVPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVKRSA GDD*
Translation from 155 to 1063
> LD26546.pep MRHLMFLMLMVLPIVICTFSAPNKFGAYAAEAVEDDLVDVEGEEGAVTGE DAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGFT NKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTF LPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETF FLYVLLAGIVVLLLVIGQQYLLGSSGKRKRAAAKKVIETGTANDSTIDYD WVPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVKRSAG DD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21794-PA | 302 | GF21794-PA | 1..302 | 1..302 | 1548 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18974-PA | 302 | GG18974-PA | 1..302 | 1..302 | 1583 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11832-PA | 303 | GH11832-PA | 1..303 | 1..302 | 1407 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0320-PB | 302 | CG32701-PB | 1..302 | 1..302 | 1547 | 100 | Plus |
l(1)G0320-PA | 302 | CG32701-PA | 1..302 | 1..302 | 1547 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14400-PA | 302 | GI14400-PA | 1..302 | 1..302 | 1402 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13128-PA | 302 | GL13128-PA | 1..302 | 1..302 | 1471 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17087-PA | 302 | GA17087-PA | 1..302 | 1..302 | 1471 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11361-PA | 302 | GM11361-PA | 1..302 | 1..302 | 1581 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16058-PA | 396 | GD16058-PA | 235..396 | 147..302 | 663 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18745-PA | 302 | GJ18745-PA | 1..302 | 1..302 | 1416 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25547-PA | 301 | GK25547-PA | 1..301 | 1..302 | 1410 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15447-PA | 302 | GE15447-PA | 1..302 | 1..302 | 1574 | 99 | Plus |