BDGP Sequence Production Resources |
Search the DGRC for LD26657
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 266 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | exu-RA |
Protein status: | LD26657.pep: gold |
Preliminary Size: | 2081 |
Sequenced Size: | 2007 |
Gene | Date | Evidence |
---|---|---|
CG8994 | 2001-01-01 | Release 2 assignment |
CG8994 | 2001-07-04 | Blastp of sequenced clone |
CG8994 | 2003-01-01 | Sim4 clustering to Release 3 |
exu | 2008-04-29 | Release 5.5 accounting |
exu | 2008-08-15 | Release 5.9 accounting |
exu | 2008-12-18 | 5.12 accounting |
2007 bp (2007 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051739
> LD26657.complete TCACTTCATATCGAAAATCTAGTGAAAGCGGTTCGCGTTTTGCAAAGGAA ATCGGTTCCTTAAAAAAAAAAAAAATTCTAGTGACTCAGCTAATTTCGTT ATCCGAATTTTCTAGATTGCTTTTCGCAGATCATATAAGAAAATGGTTGC CGATAACATCGATGCCGGAGTGGCCATTGCCGTCGCCGATCAATCCTCGT CGCCCGTGGGCGATAAAGTTGAGCTGCCGGCCGGTAATTATATCCTGGTG GGCGTGGATATCGACACCACTGGACGTCGTCTAATGGATGAGATTGTCCA GCTGGCCGCTTATACACCCACCGACCACTTCGAGCAGTACATCATGCCAT ATATGAATCTGAATCCAGCTGCTCGCCAGCGTCATCAAGTTCGTGTTATT TCGATTGGCTTTTATCGTATGCTGAAGTCGATGCAGACTTATAAGATCAT TAAATCCAAGTCTGAGATCGCTGCCCTCAAGGACTTCCTCAACTGGCTTG AGCAACTGAAGACCAAGGCGGGTCCCAGCTCGGACGGGATTGTGCTTATC TATCATGAAGAGCGCAAGTTCATTCCCTACATGATCCTGGAGTCGTTGAA GAAGTACGGCCTGTTGGAGCGCTTCACCGCGTCGGTGAAGTCGTTTGCAA ACAGCATCAATCTGGCCAAGGCTTCCATTGGCGATGCCAACATAAAGAAC TACAGTCTGCGAAAGCTTTCCAAGATCTTGTCCACGACCAAGGAGGAAGA CGCGGCTTGCTCTGCGTCCACATCTGGATCTGGATCTGGCTTGGGATCTG GATCTAGTATGGTGTCCGATTCGGTATCGATATCCCCCAGGGACAGTACC GTGACCAATGGTGACGATAAGCAATCTAGCAAGAACGCCGTTCAGGGTAA GCGGGAACTGTTTGATGGCAATGCCAGTGTTCGTGCCAAATTGGCCTTTG ATGTGGCCCTTCAGCTGAGCAACTCCGACGGCAAGCCGGAACCAAAAAGC TCGGAGGCATTGGAGAATATGTTTAATGCCATACGTCCGTTTGCCAAGTT GGTGGTGTCCGATGTCCTGGAGCTGGATATCCAGATCGAAAATTTGGAGC GTCAAAACTCCTTCCGTCCGGTGTTCCTGAACTACTTCAAGACCACTCTG TACCATCGTGTGCGTGCCGTAAAGTTCCGCATTGTGCTGGCCGAGAATGG GTTCGATTTGAACACGCTAAGTGCCATCTGGGCAGAGAAAAACATCGAGG GCCTGGACATAGCCCTGCAGTCAATTGGCCGGCTAAAGAGCAAGGACAAG GCGGAGCTGCTCGAGCTTCTGGACAGCTATTTCGATCCCAAGAAGACCAC GGTGAAGCCGGTTGTCAAGGGTAACAGCAACAATAATAACAATTATCGTC GTCGCAATCGACGCGGCGGCCGCCAATCGGTGAAGGACGCTAGGCCATCC AGCTCCCCATCGGCTAGCACCGAGTTTGGAGCAGGAGGTGACAAGTCGCG CAGCGTTTCCTCGTTGCCCGACTCTACTACCAAGACTCCCTCGCCAAACA AGCCGCGTATGCACCGTAAGCGCAACTCGCGTCAAAGCTTGGGTGCAACC CCCAATGGACTCAAGGTTGCTGCTGAAATATCCTCCTCAGGCGTGTCTGA GCTCAACAATAGCGCTCCACCTGCCGTAACCATAAGCCCAGTCGTGGCAC AACCCTCACCGACACCGGTGGCCATCACGGCCTCCAACTAAAATCCAGTT CTGGTGGATCCGTAAAGTAAATATCTTATATTGAGATACTTCTGCCATTT GCTTTGTAGATAACGTAGTTAACGAGGGGTAAGCCTTCATGTAGATTGTT GATTAATTTTATGAATTGCGTACACTTGCTTGTATTTTTAATGAATTTTA TGCATCAAATATATTGATAAAAATGTAGCCTTTTTTAGCTAAATGTAAAA GGTTTTATTACATATTTTCAATATAAACTCACAACGCTTAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16555065..16556598 | 1989..444 | 7470 | 99 | Minus |
chr2R | 21145070 | chr2R | 16556902..16557191 | 292..1 | 1395 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 16556680..16556834 | 445..291 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 20668350..20669897 | 1991..444 | 7740 | 100 | Minus |
2R | 25286936 | 2R | 20670201..20670490 | 292..1 | 1395 | 99.3 | Minus |
2R | 25286936 | 2R | 20669979..20670133 | 445..291 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 20669549..20671096 | 1991..444 | 7740 | 100 | Minus |
2R | 25260384 | 2R | 20671400..20671689 | 292..1 | 1405 | 99.3 | Minus |
2R | 25260384 | 2R | 20671178..20671332 | 445..291 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 3820..3908 | 1974..1880 | 118 | 63.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16556902..16557191 | 1..292 | 99 | Minus | |
chr2R | 16555065..16556596 | 446..1989 | 99 | <- | Minus |
chr2R | 16556680..16556832 | 293..445 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RC | 1..1599 | 143..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RC | 1..1599 | 143..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RB | 1..1599 | 143..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RC | 1..1599 | 143..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RB | 1..1599 | 143..1741 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RB | 1..1987 | 1..1989 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RB | 1..1987 | 1..1989 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RB | 2..1988 | 1..1989 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RB | 1..1987 | 1..1989 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
exu-RB | 2..1988 | 1..1989 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20668352..20669895 | 446..1989 | 100 | <- | Minus |
2R | 20669979..20670131 | 293..445 | 100 | <- | Minus |
2R | 20670201..20670490 | 1..292 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20668352..20669895 | 446..1989 | 100 | <- | Minus |
2R | 20669979..20670131 | 293..445 | 100 | <- | Minus |
2R | 20670201..20670490 | 1..292 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20668352..20669895 | 446..1989 | 100 | <- | Minus |
2R | 20669979..20670131 | 293..445 | 100 | <- | Minus |
2R | 20670201..20670490 | 1..292 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16555857..16557400 | 446..1989 | 100 | <- | Minus |
arm_2R | 16557484..16557636 | 293..445 | 100 | <- | Minus |
arm_2R | 16557706..16557995 | 1..292 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20669551..20671094 | 446..1989 | 100 | <- | Minus |
2R | 20671178..20671330 | 293..445 | 100 | <- | Minus |
2R | 20671400..20671689 | 1..292 | 99 | Minus |
Translation from 142 to 1740
> LD26657.pep MVADNIDAGVAIAVADQSSSPVGDKVELPAGNYILVGVDIDTTGRRLMDE IVQLAAYTPTDHFEQYIMPYMNLNPAARQRHQVRVISIGFYRMLKSMQTY KIIKSKSEIAALKDFLNWLEQLKTKAGPSSDGIVLIYHEERKFIPYMILE SLKKYGLLERFTASVKSFANSINLAKASIGDANIKNYSLRKLSKILSTTK EEDAACSASTSGSGSGLGSGSSMVSDSVSISPRDSTVTNGDDKQSSKNAV QGKRELFDGNASVRAKLAFDVALQLSNSDGKPEPKSSEALENMFNAIRPF AKLVVSDVLELDIQIENLERQNSFRPVFLNYFKTTLYHRVRAVKFRIVLA ENGFDLNTLSAIWAEKNIEGLDIALQSIGRLKSKDKAELLELLDSYFDPK KTTVKPVVKGNSNNNNNYRRRNRRGGRQSVKDARPSSSPSASTEFGAGGD KSRSVSSLPDSTTKTPSPNKPRMHRKRNSRQSLGATPNGLKVAAEISSSG VSELNNSAPPAVTISPVVAQPSPTPVAITASN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12748-PA | 508 | GF12748-PA | 1..508 | 1..532 | 1799 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20837-PA | 522 | GG20837-PA | 1..522 | 1..532 | 2213 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19889-PA | 474 | GH19889-PA | 1..443 | 1..483 | 1366 | 60.5 | Plus |
Dgri\GH25272-PA | 441 | GH25272-PA | 1..439 | 1..479 | 1358 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
exu-PD | 532 | CG8994-PD | 1..532 | 1..532 | 2660 | 100 | Plus |
exu-PC | 532 | CG8994-PC | 1..532 | 1..532 | 2660 | 100 | Plus |
exu-PB | 532 | CG8994-PB | 1..532 | 1..532 | 2660 | 100 | Plus |
exu-PA | 532 | CG8994-PA | 1..532 | 1..532 | 2660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19844-PA | 494 | GI19844-PA | 1..491 | 1..527 | 1546 | 61.8 | Plus |
Dmoj\GI10874-PA | 454 | GI10874-PA | 24..337 | 32..406 | 711 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17430-PA | 497 | GL17430-PA | 1..497 | 1..532 | 1501 | 57.7 | Plus |
Dper\exu2-PA | 437 | GL19898-PA | 4..389 | 15..464 | 746 | 42.7 | Plus |
Dper\GL19899-PA | 154 | GL19899-PA | 12..141 | 15..145 | 524 | 74.8 | Plus |
Dper\GL19900-PA | 306 | GL19900-PA | 1..258 | 174..464 | 501 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\exu1-PA | 495 | GA21461-PA | 1..495 | 1..532 | 1502 | 58.1 | Plus |
Dpse\exu2-PA | 480 | GA28347-PA | 22..430 | 25..464 | 1108 | 53.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19766-PA | 533 | GM19766-PA | 1..533 | 1..532 | 2400 | 91.7 | Plus |
Dsec\GM15046-PA | 149 | GM15046-PA | 1..102 | 1..102 | 516 | 94.1 | Plus |
Dsec\GM13550-PA | 83 | GM13550-PA | 1..83 | 450..532 | 381 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25256-PA | 533 | GD25256-PA | 1..533 | 1..532 | 2407 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\exu-PA | 486 | GJ18765-PA | 1..485 | 1..529 | 1578 | 62.5 | Plus |
Dvir\GJ19481-PA | 448 | GJ19481-PA | 20..402 | 29..488 | 825 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21418-PA | 532 | GK21418-PA | 1..532 | 1..532 | 1536 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13776-PA | 525 | GE13776-PA | 1..525 | 1..532 | 2219 | 87.2 | Plus |
Translation from 142 to 1740
> LD26657.hyp MVADNIDAGVAIAVADQSSSPVGDKVELPAGNYILVGVDIDTTGRRLMDE IVQLAAYTPTDHFEQYIMPYMNLNPAARQRHQVRVISIGFYRMLKSMQTY KIIKSKSEIAALKDFLNWLEQLKTKAGPSSDGIVLIYHEERKFIPYMILE SLKKYGLLERFTASVKSFANSINLAKASIGDANIKNYSLRKLSKILSTTK EEDAACSASTSGSGSGLGSGSSMVSDSVSISPRDSTVTNGDDKQSSKNAV QGKRELFDGNASVRAKLAFDVALQLSNSDGKPEPKSSEALENMFNAIRPF AKLVVSDVLELDIQIENLERQNSFRPVFLNYFKTTLYHRVRAVKFRIVLA ENGFDLNTLSAIWAEKNIEGLDIALQSIGRLKSKDKAELLELLDSYFDPK KTTVKPVVKGNSNNNNNYRRRNRRGGRQSVKDARPSSSPSASTEFGAGGD KSRSVSSLPDSTTKTPSPNKPRMHRKRNSRQSLGATPNGLKVAAEISSSG VSELNNSAPPAVTISPVVAQPSPTPVAITASN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
exu-PD | 532 | CG8994-PD | 1..532 | 1..532 | 2660 | 100 | Plus |
exu-PC | 532 | CG8994-PC | 1..532 | 1..532 | 2660 | 100 | Plus |
exu-PB | 532 | CG8994-PB | 1..532 | 1..532 | 2660 | 100 | Plus |
exu-PA | 532 | CG8994-PA | 1..532 | 1..532 | 2660 | 100 | Plus |