LD26673.complete Sequence
1544 bp (1544 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060378
> LD26673.complete
AAGCAATATAATATTTGTTAGCTGAAAGTGCCTTGCTAAAATTTGACTTT
CTAACTCCTCTTAGTTTCGAATATTTTCCAGTGCAACCACGAAGTTAACC
GAAGCATTGATAAAGCCCATGTCTATGGCTATCGACTATCGCTAATTGAT
TGAGTGCCTTGCACTTGTCGACTCGAAACCCGCAGACCAAACGACGTAAT
TCCCCCGACGCGTCTAATATTTTCGCCACTTTGGTGTTGTGTTGTGTTGT
GCCTTACACTCTCTGGCAGTTACATAAGCCATCTATCAAAGATTGCAAAT
TGCTGGGTGGAAAACTCGCGGCTCTTGTGTTCGACACATTTCCAAGAACT
CAAAAGCAAAACAAAACACAAACGTGACAATCCATGTGGGTGCAGCCAAA
GAACTGCGACCAGGGGAACTGATTTCGTATGGGCAGAACATGGCGACAAT
AAGCAAAACCCAGGCACAAAGTGGAGCACGTGCAAATTGGCTATCAATCA
ATATGCATACGGGTAGGAAAATGTACTGCGATGATATAGTTCGCATCGCT
TCAAAAGATTCGCAATTACGTAGAAATAAAAGCAAATGCCGACTGCATGG
CAAACGAATTGAATGGCTCCCAGCCAAATGGCAAAAATGTTAGGCCTCTA
TGACACTAGGTCGAAAACATAGTAGGCTATTCTAATGTAAATTCAAACAC
TTCCATATAGTAACATATTTTTTAATAACATAAAATGAAGAAAATTGATG
AACAGAAGCAGCGCAGTCAAAGGATGAGCTAAAGATGCCAGCTTGCAGGA
ACACCATGAGCAGTCAGGAGCGCACGCAGAACATCAAGCGCTAGATAATG
GAGGATGAATTGACCTTGTGCGAGGTCAATACCCTTTCAATCGATTATGA
GGCGGCCGGCAAATGACAGTTTAACAGCCGCCACGGAACTAGCTGATCAA
TCCATTATTGACGATGTTTTTGGAGAAGACATCCTGATGAAAGACTTGCA
GCGTAAGAACACCGTGCAGCCCACTTGCTCAACAACGACATCGTATCTTG
TCCCATTTGCTTTGAGAAAATGAAGCGCGGTACCATTATGGTGTGCTTGG
AACCGCCATCGTTTACTTCAAAGGACTTGGACACCCGTTTCTCCTCCTCG
GGATCTTCCACATCACGCTGCACCAAATCGAAATCAAATTCATCAAAGCG
AATTCTTCGCAGCTCCGGTTACACAGAGCTGAACAGCAACTCGACTACTC
TGCTGTCCAGCGAGGACGAACTTACTCCGCGTCAGCGCCTCTAGTGCAAT
CTCTTCAAACAGACCGTCGGCTGTCCCAGATGTGGCCTGGAGTTCAAGGG
CCACCAGCTGAAGGCGCATCAATCTCTCTGCCAGGGTCGCAAGAAGCACT
AGGACGGCACCTTATACGAACCATACATTAAATAAGTTTTTCACAATTTT
TCACACAGTAAATTTTCTTCATGTTATCAAAAGTGTGTTACAAGCAAAAT
ATATAAAACAACTGATTGTAAAGTCAAAAAAAAAAAAAAAAAAA
LD26673.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:19:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14033-RA | 1533 | CG14033-RA | 1..1527 | 1..1527 | 7635 | 100 | Plus |
tkv-RC | 3000 | tkv-RC | 18..271 | 1527..1274 | 1270 | 100 | Minus |
CG9203-RA | 2382 | CG9203-RA | 2129..2295 | 1239..1405 | 415 | 83.2 | Plus |
CG9203-RA | 2382 | CG9203-RA | 1573..1691 | 782..900 | 355 | 86.5 | Plus |
CG9203-RA | 2382 | CG9203-RA | 1700..1834 | 897..1032 | 355 | 85.2 | Plus |
CG9203-RA | 2382 | CG9203-RA | 2007..2090 | 1144..1227 | 285 | 89.2 | Plus |
CG9203-RA | 2382 | CG9203-RA | 1855..1899 | 1034..1078 | 210 | 97.7 | Plus |
CG9203-RA | 2382 | CG9203-RA | 1931..1963 | 1083..1115 | 150 | 96.9 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:55:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 5241807..5243331 | 1..1525 | 7625 | 100 | Plus |
chrX | 22417052 | chrX | 15363300..15363561 | 1032..782 | 525 | 81.7 | Minus |
chrX | 22417052 | chrX | 15362839..15363005 | 1405..1239 | 415 | 83.2 | Minus |
chrX | 22417052 | chrX | 15363044..15363127 | 1227..1144 | 270 | 88.1 | Minus |
chrX | 22417052 | chrX | 15363235..15363279 | 1078..1034 | 210 | 97.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:18:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:55:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5242707..5244233 | 1..1527 | 7635 | 100 | Plus |
X | 23542271 | X | 15473352..15473613 | 1032..782 | 525 | 81.7 | Minus |
X | 23542271 | X | 15472891..15473057 | 1405..1239 | 415 | 83.2 | Minus |
X | 23542271 | X | 15473096..15473179 | 1227..1144 | 285 | 89.3 | Minus |
X | 23542271 | X | 15473287..15473331 | 1078..1034 | 210 | 97.8 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:42:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5242707..5244233 | 1..1527 | 7635 | 100 | Plus |
X | 23527363 | X | 15480989..15481155 | 1405..1239 | 415 | 83.2 | Minus |
X | 23527363 | X | 15481450..15481584 | 1032..897 | 355 | 85.2 | Minus |
X | 23527363 | X | 15481593..15481711 | 900..782 | 355 | 86.5 | Minus |
X | 23527363 | X | 15481194..15481277 | 1227..1144 | 285 | 89.2 | Minus |
X | 23527363 | X | 15481385..15481429 | 1078..1034 | 210 | 97.7 | Minus |
X | 23527363 | X | 15481321..15481353 | 1115..1083 | 150 | 96.9 | Minus |
Blast to na_te.dros performed 2019-03-16 00:55:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 42..95 | 691..743 | 114 | 70.4 | Plus |
LD26673.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:56:42 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 5241807..5243331 | 1..1525 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:05:44 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14033-RA | 1..225 | 1070..1294 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 20:02:43 has no hits.
Sim4 to dmel-all-CDS-r5.52.fasta performed on 2013-08-04 06:59:50 has no hits.
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:33:14 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14033-RA | 1..225 | 1070..1294 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 04:17:11 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:51:07 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14033-RA | 1..1525 | 1..1525 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:02:43 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tkv-RC | 20..277 | 1268..1525 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:59:50 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tkv-RC | 1..166 | 1268..1433 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:33:14 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14033-RA | 1..1525 | 1..1525 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:17:11 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tkv-RC | 1..166 | 1268..1433 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:56:42 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5242707..5244231 | 1..1525 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:56:42 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5242707..5244231 | 1..1525 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:56:42 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5242707..5244231 | 1..1525 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:59:50 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5242707..5244231 | 1..1525 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:10:02 Download gff for
LD26673.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5242707..5244231 | 1..1525 | 100 | | Plus |
LD26673.pep Sequence
Translation from 1069 to 1293
> LD26673.pep
MKRGTIMVCLEPPSFTSKDLDTRFSSSGSSTSRCTKSKSNSSKRILRSSG
YTELNSNSTTLLSSEDELTPRQRL*
LD26673.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:22:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mh-PA | 724 | CG9203-PA | 606..687 | 6..73 | 180 | 58.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:07:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19514-PA | 133 | GM19514-PA | 14..96 | 5..73 | 159 | 62.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:07:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24499-PA | 237 | GD24499-PA | 119..200 | 5..73 | 139 | 55.4 | Plus |
LD26673.hyp Sequence
Translation from 1069 to 1293
> LD26673.hyp
MKRGTIMVCLEPPSFTSKDLDTRFSSSGSSTSRCTKSKSNSSKRILRSSG
YTELNSNSTTLLSSEDELTPRQRL*
LD26673.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9203-PA | 724 | CG9203-PA | 606..687 | 6..73 | 180 | 58.5 | Plus |