BDGP Sequence Production Resources |
Search the DGRC for LD26737
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 267 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4407-RA |
Protein status: | LD26737.pep: gold |
Preliminary Size: | 1466 |
Sequenced Size: | 1322 |
Gene | Date | Evidence |
---|---|---|
CG4407 | 2001-01-01 | Release 2 assignment |
CG4407 | 2001-07-04 | Blastp of sequenced clone |
CG4407 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4407 | 2008-04-29 | Release 5.5 accounting |
CG4407 | 2008-08-15 | Release 5.9 accounting |
CG4407 | 2008-12-18 | 5.12 accounting |
1322 bp (1322 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051741
> LD26737.complete AAGACGAAAAAAGGAAGGAAAATCACTGGCGCGGAATAACAATTAACAAA ATGGAATAATTGCATTGCTGTCGCCGTAACTCATCAGTTAAATGTGCGCC AGTAAACAGTCGATGCAGCAACGAAACACATGAGCTATTGGCGTGTGACG TCATCGTTTTTGCTAGCCAGGGCACGGCCACGCCTCCCACAAACATTACG CCCACTGAGCACCATGAACGAATGCCGGAAGAACATCACAAACATCACAA ACATTACAGCGAACAACAGCATTCTATGCGCAAAGAGCATTAGCAAAAAG CATTTGTTTCTAGAGAAACGGAGCATGTCGGATCGTTCGGAGAACTCCAA GGATGTGGCAAAGGGACAGGATATATCAAATCCAATGGAACTAACAGCCG AGGATCGACTGGCCATTGAGGAGCGGCAAAATAAAGCGTTCGCCTTCTTC GCCGAAACCCTGCAAATCTACGGCGTCGAGGAGCTAATTTTCTGTTTCAA CGGCGGCAAGGATTGCACCGTGCTGCTCGATCTCCTTATGCGTTACCTGC GCCAGGAGAACATCTCCAGCGGCGACATTCCCATGCTGTACATTAAATCC GGCGATTCGTTTCCGGAAATCGATGAGTTCGTCGAGCGTTGCGTACGCAA CTACCGCGTCCAGTTGGTTCAGTACGAGGGTACGCTCAAGGAGGCACTCA CCCACATGTCGTCGGACATGCCGCGGATCAAGGCCGTCTTCGTGGGCAGC CGCAACACGGATCCCTACTGCCAGCATCTGGCGCCCATGCAGCCCACGGA CAACGACTGGCCGCCGATGATGCGCCTGAATCCGCTGCTGGAGTGGAGCT ACCACGACGTCTGGCACTACATCCACTTGAACTCGGTGCCCTATTGCAGC CTGTACGATCGGGGCTACACCTCGATCGGGAATCGTGCGAACACAGTGCC TAATCCGCACCTCCGACGCACCGATGCCGAGTGTGAATGTGGTTCTAATT CCGATGCCGTCTGCTCCTGCGATCTGGGTGGCTATCGGCCCGCCTGGGAG CTCCAGGATGCCACCATGGAGCGTGCTGGTCGCCTGCCCAGGAAGTAGGA TTCCATTTGCGTGGCTATAGTGTAATTGAATAGCTTAAACTCCAGTTAGT CACGAAACTTTATATAGCTGTGTATATATATTAACGTGTGATCTGGATTT CGGTAAACAAACTTAATTTAGTAAAATTTTGTACGACCTAAGGTATGCCG CTGAATAAATGTGGCCTCTGTTAGCAGGCCACTTAAGCAGTAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12793243..12793894 | 792..141 | 3260 | 100 | Minus |
chrX | 22417052 | chrX | 12792280..12792780 | 1291..791 | 2490 | 99.8 | Minus |
chrX | 22417052 | chrX | 12794252..12794392 | 141..1 | 705 | 100 | Minus |
chr2L | 23010047 | chr2L | 13411730..13411850 | 800..920 | 185 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12902316..12902967 | 792..141 | 3260 | 100 | Minus |
X | 23542271 | X | 12901352..12901853 | 1292..791 | 2510 | 100 | Minus |
X | 23542271 | X | 12903329..12903469 | 141..1 | 705 | 100 | Minus |
2L | 23513712 | 2L | 13413068..13413188 | 800..920 | 185 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12910414..12911065 | 792..141 | 3260 | 100 | Minus |
X | 23527363 | X | 12909450..12909951 | 1292..791 | 2510 | 100 | Minus |
X | 23527363 | X | 12911427..12911567 | 141..1 | 705 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12794252..12794392 | 1..141 | 100 | Minus | |
chrX | 12792280..12792778 | 793..1291 | 99 | <- | Minus |
chrX | 12793243..12793893 | 142..792 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 1..969 | 130..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 1..969 | 130..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 1..969 | 130..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 1..969 | 130..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 1..969 | 130..1098 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 15..1303 | 1..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 49..1339 | 1..1291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 48..1338 | 1..1291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 15..1303 | 1..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4407-RA | 48..1338 | 1..1291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12901353..12901851 | 793..1291 | 100 | <- | Minus |
X | 12902316..12902966 | 142..792 | 100 | <- | Minus |
X | 12903329..12903469 | 1..141 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12901353..12901851 | 793..1291 | 100 | <- | Minus |
X | 12902316..12902966 | 142..792 | 100 | <- | Minus |
X | 12903329..12903469 | 1..141 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12901353..12901851 | 793..1291 | 100 | <- | Minus |
X | 12902316..12902966 | 142..792 | 100 | <- | Minus |
X | 12903329..12903469 | 1..141 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12795386..12795884 | 793..1291 | 100 | <- | Minus |
arm_X | 12796349..12796999 | 142..792 | 100 | <- | Minus |
arm_X | 12797362..12797502 | 1..141 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12909451..12909949 | 793..1291 | 100 | <- | Minus |
X | 12910414..12911064 | 142..792 | 100 | <- | Minus |
X | 12911427..12911567 | 1..141 | 100 | Minus |
Translation from 129 to 1097
> LD26737.pep MSYWRVTSSFLLARARPRLPQTLRPLSTMNECRKNITNITNITANNSILC AKSISKKHLFLEKRSMSDRSENSKDVAKGQDISNPMELTAEDRLAIEERQ NKAFAFFAETLQIYGVEELIFCFNGGKDCTVLLDLLMRYLRQENISSGDI PMLYIKSGDSFPEIDEFVERCVRNYRVQLVQYEGTLKEALTHMSSDMPRI KAVFVGSRNTDPYCQHLAPMQPTDNDWPPMMRLNPLLEWSYHDVWHYIHL NSVPYCSLYDRGYTSIGNRANTVPNPHLRRTDAECECGSNSDAVCSCDLG GYRPAWELQDATMERAGRLPRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20884-PA | 294 | GF20884-PA | 24..294 | 54..322 | 1001 | 69.2 | Plus |
Dana\GF23240-PA | 259 | GF23240-PA | 13..246 | 58..319 | 488 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19532-PA | 306 | GG19532-PA | 1..306 | 1..322 | 1269 | 77.5 | Plus |
Dere\GG23851-PA | 253 | GG23851-PA | 35..240 | 96..318 | 445 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17619-PA | 231 | GH17619-PA | 1..231 | 86..322 | 815 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4407-PA | 322 | CG4407-PA | 1..322 | 1..322 | 1724 | 100 | Plus |
CG4407-PB | 294 | CG4407-PB | 1..294 | 29..322 | 1581 | 100 | Plus |
CG16848-PA | 254 | CG16848-PA | 50..241 | 111..318 | 471 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16275-PA | 304 | GI16275-PA | 54..304 | 69..322 | 786 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22960-PA | 277 | GL22960-PA | 32..277 | 72..322 | 945 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18164-PA | 277 | GA18164-PA | 32..277 | 72..322 | 946 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11526-PA | 319 | GM11526-PA | 1..319 | 1..322 | 1615 | 92.2 | Plus |
Dsec\GM10510-PA | 254 | GM10510-PA | 49..241 | 110..318 | 465 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23899-PA | 254 | GD23899-PA | 49..241 | 110..318 | 465 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16919-PA | 290 | GJ16919-PA | 48..290 | 81..322 | 815 | 62.1 | Plus |
Dvir\GJ18102-PA | 257 | GJ18102-PA | 26..244 | 95..318 | 493 | 41.8 | Plus |
Translation from 129 to 1097
> LD26737.hyp MSYWRVTSSFLLARARPRLPQTLRPLSTMNECRKNITNITNITANNSILC AKSISKKHLFLEKRSMSDRSENSKDVAKGQDISNPMELTAEDRLAIEERQ NKAFAFFAETLQIYGVEELIFCFNGGKDCTVLLDLLMRYLRQENISSGDI PMLYIKSGDSFPEIDEFVERCVRNYRVQLVQYEGTLKEALTHMSSDMPRI KAVFVGSRNTDPYCQHLAPMQPTDNDWPPMMRLNPLLEWSYHDVWHYIHL NSVPYCSLYDRGYTSIGNRANTVPNPHLRRTDAECECGSNSDAVCSCDLG GYRPAWELQDATMERAGRLPRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4407-PA | 322 | CG4407-PA | 1..322 | 1..322 | 1724 | 100 | Plus |
CG4407-PB | 294 | CG4407-PB | 1..294 | 29..322 | 1581 | 100 | Plus |
CG16848-PA | 254 | CG16848-PA | 50..241 | 111..318 | 471 | 43.3 | Plus |