BDGP Sequence Production Resources |
Search the DGRC for LD26817
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 268 |
Well: | 17 |
Vector: | pOT2 |
Associated Gene/Transcript | akirin-RB |
Protein status: | LD26817.pep: gold |
Preliminary Size: | 1379 |
Sequenced Size: | 1267 |
Gene | Date | Evidence |
---|---|---|
CG8580 | 2001-01-01 | Release 2 assignment |
CG8580 | 2002-04-09 | Blastp of sequenced clone |
CG8580 | 2003-01-01 | Sim4 clustering to Release 3 |
bhr | 2008-04-29 | Release 5.5 accounting |
bhr | 2008-08-15 | Release 5.9 accounting |
akirin | 2008-12-18 | 5.12 accounting |
1267 bp (1267 high quality bases) assembled on 2002-04-09
GenBank Submission: AY095189
> LD26817.complete CCGTCACGCAAGCATCGTCGTCCATTTTTGCTAAGAAGCGAGACGAAAAT TTGTAAATTATATCTAGCGAGTCGCCGAGGACGAACAACTATTGACAGTG CATTTCAGTGGCCTTTGGAATACTGCTCAAACAACCAGCAAGCAATAACA TTACTTATATCTAACCGAAAACCTAAATTAATCACCCAAACTGAAGTACG GACGTGAATGTAAGTGGGTATGTGCCAGCGGACTAGTGGCACAATAAAAA AGTAAATAAAGCGCGTGTGAAGTGGTGCAGAAAGCAAAAAAGCAGTCGGA AGGAAAAATCAAAATACGCATTAATCCGACGCTTGATCTTCCATCTGCAG CATCCATCATTTGGAATCGAGGCAATAATCAGCATCTACCGACAATCAAG CAAGCCATCTATCTATCAGAAGACCACCGGGTAGTAGAACCTCAATCATA GCGATGGCCTGTGCAACCCTGAAACGAGCCCTAGACTGGGAGTCGATGAA CCAGCGGCCTCCGAAGCGCCGGCGTTGCAATCCCTTTGGCCAGGCTGGGA GCAATGCAGGTCCAGCGTCGCCATCCCGCGACGGTCCCAGCACCTCGGCT GGTCTGCCCCACACGCCCAGCAACCGATTCGCCAAGGATAGCACCGAACC TAGTCCGTTCAGTGAGTCGTCGCTGGCCAAAATGTCACCAGACAAAATGG CCGAGAGCTTGTGCAATGAGATCAAGAGACTGCACAAGCGCAAACAGCTG CCGATCACTTCGTCGGCCTTGGAACGCATGCAGGATTCGGAGTCCAGCGG ATCGGAGATGGGTCCAGAGAGTCCGCGCCGCCCGGACAGTCCACAGAACC TGATGCGCCACGGCGAAAAGGCCCTGTTCACGTTCAAGCAGGTGCAGCTC ATTTGCGAGAGCATGATCAAGGAGCGCGAGAATCAGCTAAGGGAGCGCTA CGAGTCCGTGCTGACCACCAAGCTGGCCGAGCAGTACGATGCCTTTGTCA AGTTCACATATGATCAGATACAGCGTCGCTACGAGGCAGCGCCTAGCTAC CTGTCGTAAAGCTGTGTACACAGCTGTAGCCTCAGAAAGAAGAAATTAAT AATTGCACTACGATCTTATGTGACGGTAGATCTACCGCGACAACAACAGC CCTCATAAACTATAACAAACAACAAATAAGGAAACTAAAGCAAACGCAAA ACAAACCAACAAAAAAAAAAAACCTAAAAAGCAAAAAACCTAAAAACAAA CAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 7363814..7364179 | 326..691 | 1815 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 7364267..7364626 | 689..1048 | 1800 | 100 | Plus |
chr3L | 24539361 | chr3L | 7361966..7362290 | 1..325 | 1625 | 100 | Plus |
chr3L | 24539361 | chr3L | 7364688..7364887 | 1049..1251 | 935 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 7371707..7372072 | 326..691 | 1830 | 100 | Plus |
3L | 28110227 | 3L | 7372160..7372519 | 689..1048 | 1800 | 100 | Plus |
3L | 28110227 | 3L | 7369860..7370184 | 1..325 | 1625 | 100 | Plus |
3L | 28110227 | 3L | 7372581..7372796 | 1049..1264 | 1080 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 7364807..7365172 | 326..691 | 1830 | 100 | Plus |
3L | 28103327 | 3L | 7365260..7365619 | 689..1048 | 1800 | 100 | Plus |
3L | 28103327 | 3L | 7362960..7363284 | 1..325 | 1625 | 100 | Plus |
3L | 28103327 | 3L | 7365681..7365896 | 1049..1264 | 1080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7363814..7364179 | 326..691 | 99 | -> | Plus |
chr3L | 7364270..7364626 | 692..1048 | 100 | -> | Plus |
chr3L | 7364688..7364792 | 1049..1153 | 100 | == | Plus |
chr3L | 7361966..7362290 | 1..325 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
akirin-RB | 1..606 | 454..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
akirin-RC | 1..606 | 454..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
akirin-RD | 1..606 | 454..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bhr-RB | 1..606 | 454..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
akirin-RD | 1..606 | 454..1059 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
akirin-RA | 62..1312 | 1..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
akirin-RD | 61..1311 | 1..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
akirin-RA | 18..1268 | 1..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bhr-RA | 62..1312 | 1..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
akirin-RA | 18..1268 | 1..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7369860..7370184 | 1..325 | 100 | -> | Plus |
3L | 7371707..7372072 | 326..691 | 100 | -> | Plus |
3L | 7372163..7372519 | 692..1048 | 100 | -> | Plus |
3L | 7372581..7372783 | 1049..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7369860..7370184 | 1..325 | 100 | -> | Plus |
3L | 7371707..7372072 | 326..691 | 100 | -> | Plus |
3L | 7372163..7372519 | 692..1048 | 100 | -> | Plus |
3L | 7372581..7372783 | 1049..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7369860..7370184 | 1..325 | 100 | -> | Plus |
3L | 7371707..7372072 | 326..691 | 100 | -> | Plus |
3L | 7372163..7372519 | 692..1048 | 100 | -> | Plus |
3L | 7372581..7372783 | 1049..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7362960..7363284 | 1..325 | 100 | -> | Plus |
arm_3L | 7364807..7365172 | 326..691 | 100 | -> | Plus |
arm_3L | 7365263..7365619 | 692..1048 | 100 | -> | Plus |
arm_3L | 7365681..7365883 | 1049..1251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7362960..7363284 | 1..325 | 100 | -> | Plus |
3L | 7364807..7365172 | 326..691 | 100 | -> | Plus |
3L | 7365263..7365619 | 692..1048 | 100 | -> | Plus |
3L | 7365681..7365883 | 1049..1251 | 100 | Plus |
Translation from 453 to 1058
> LD26817.hyp MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAG LPHTPSNRFAKDSTEPSPFSESSLAKMSPDKMAESLCNEIKRLHKRKQLP ITSSALERMQDSESSGSEMGPESPRRPDSPQNLMRHGEKALFTFKQVQLI CESMIKERENQLRERYESVLTTKLAEQYDAFVKFTYDQIQRRYEAAPSYL S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
akirin-PF | 201 | CG8580-PF | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PE | 201 | CG8580-PE | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PD | 201 | CG8580-PD | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PC | 201 | CG8580-PC | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PB | 201 | CG8580-PB | 1..201 | 1..201 | 1045 | 100 | Plus |
Translation from 453 to 1058
> LD26817.pep MACATLKRALDWESMNQRPPKRRRCNPFGQAGSNAGPASPSRDGPSTSAG LPHTPSNRFAKDSTEPSPFSESSLAKMSPDKMAESLCNEIKRLHKRKQLP ITSSALERMQDSESSGSEMGPESPRRPDSPQNLMRHGEKALFTFKQVQLI CESMIKERENQLRERYESVLTTKLAEQYDAFVKFTYDQIQRRYEAAPSYL S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10638-PA | 207 | GF10638-PA | 1..207 | 1..201 | 924 | 87.9 | Plus |
Dana\GF15088-PA | 1884 | GF15088-PA | 1..146 | 1..191 | 189 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14420-PA | 203 | GG14420-PA | 1..203 | 1..201 | 1027 | 96.6 | Plus |
Dere\GG21727-PA | 2091 | GG21727-PA | 93..177 | 105..191 | 147 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14876-PA | 209 | GH14876-PA | 1..209 | 1..201 | 775 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
akirin-PF | 201 | CG8580-PF | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PE | 201 | CG8580-PE | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PD | 201 | CG8580-PD | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PC | 201 | CG8580-PC | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PB | 201 | CG8580-PB | 1..201 | 1..201 | 1045 | 100 | Plus |
akirin-PA | 201 | CG8580-PA | 1..201 | 1..201 | 1045 | 100 | Plus |
CG42830-PA | 187 | CG42830-PA | 1..187 | 1..201 | 169 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12849-PA | 206 | GI12849-PA | 1..206 | 1..201 | 857 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26352-PA | 186 | GL26352-PA | 1..186 | 1..201 | 815 | 80.6 | Plus |
Dper\GL24042-PA | 191 | GL24042-PA | 1..191 | 1..201 | 727 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21176-PA | 199 | GA21176-PA | 1..199 | 1..201 | 965 | 90.5 | Plus |
Dpse\GA26488-PA | 191 | GA26488-PA | 1..191 | 1..201 | 707 | 75.1 | Plus |
Dpse\GA23138-PA | 136 | GA23138-PA | 71..123 | 137..189 | 152 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14836-PA | 201 | GM14836-PA | 1..201 | 1..201 | 1066 | 100 | Plus |
Dsec\GM17110-PA | 2044 | GM17110-PA | 93..177 | 105..191 | 145 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14010-PA | 201 | GD14010-PA | 1..201 | 1..201 | 1066 | 100 | Plus |
Dsim\GD21851-PA | 2044 | GD21851-PA | 93..177 | 105..191 | 150 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12994-PA | 201 | GJ12994-PA | 1..201 | 1..201 | 819 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17376-PA | 202 | GK17376-PA | 1..202 | 1..201 | 931 | 88.8 | Plus |
Dwil\GK20615-PA | 167 | GK20615-PA | 1..167 | 1..201 | 301 | 39.4 | Plus |
Dwil\GK20213-PA | 141 | GK20213-PA | 80..141 | 140..201 | 224 | 69.4 | Plus |
Dwil\GK20616-PA | 240 | GK20616-PA | 177..240 | 138..201 | 220 | 65.6 | Plus |
Dwil\GK20617-PA | 167 | GK20617-PA | 104..167 | 138..201 | 219 | 64.1 | Plus |
Dwil\GK20213-PA | 141 | GK20213-PA | 18..79 | 138..199 | 214 | 66.1 | Plus |