BDGP Sequence Production Resources |
Search the DGRC for LD26833
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 268 |
Well: | 33 |
Vector: | pOT2 |
Associated Gene/Transcript | rogdi-RA |
Protein status: | LD26833.pep: gold |
Preliminary Size: | 2122 |
Sequenced Size: | 2028 |
Gene | Date | Evidence |
---|---|---|
CG7725 | 2001-09-19 | Blastp of sequenced clone |
CG7725 | 2003-01-01 | Sim4 clustering to Release 3 |
rogdi | 2008-04-29 | Release 5.5 accounting |
rogdi | 2008-08-15 | Release 5.9 accounting |
rogdi | 2008-12-18 | 5.12 accounting |
2028 bp (2028 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060379
> LD26833.complete CTGAAATAAAAACAAAATTACAGCGCTCACAATACAAATTGCTGGCGTTG CTGCAGCGGAAAGCGGACATAAGCGCAGATTCTTAGCAGCGCGGAAAAAG CCGAAAAGCGCGATGAAAATGCTCGCGGACACGGAGCGTGAGGAAGCCCT CAACCTGCAAATCGAGTTCGAGTGGGTGCTGCGCCAAGAAGTACACGCGA TACTGAAGCAATTAAGGAGCATTCTGGTGGAGTGCGCTCATCGATTTCCG GTGCCCCTTTACGAGAACGAGGGAAAGAAGACTGAGAAGTTCATACTCAC CGTGTCGCCCGATCAGCTGAAGGCCGTGCTGACCCTAACGGGCGATGCCA TCACCCAGGCTGACATTAGCTTTAAGCTGTGCAAGGCACCGAGCCAAACG CAACGTACCTCCATTACACATGACTCTCCCTGGAAGTTGCAGCAGGTCCA GGATGCGGCCAATCATCTGCAGACCGCCATCAACCACATAGACGATGTCG ACGACTCTTATCACTTCAAAACCTCCGACGAAGTGCTGCATGTGATAGGC AACATTCTGGATGCCCTGCAGCGGGGCAGAAACAGTTTGCTGGTGCCCAA AAAGAAGCCCATCGATGAGCTGATCAAAGGGCGCAATATGAAGTCGCTGG TGCCCAATCTGCCCGAGGATTTGGCCGTTAGCTTCTACCTGCAGAGCCAC AAGCTGATCATTGCCGTCTACCAGCTGCTGAACAACCAGGGCACAATGCG CTTCGATTCCCGCCAAGCGGAGGCCTCTGTCCAGTGGCTTAACGACGTGC TACTGCTGCTGATGAATGGCCAGAAACTGTGCCAGCAATTAAAAGACAAG ATATCTGTGTTTTCGGTGTACAAAGATTTCACAGTTGGCTCGCGTTCGCC CTCGGCACTTTCCTACTGAGACGGGAATGCGCCGGGAAATGGAAGCCGGG TATGGAAACCCTTGATCGATGGCACTGGTGGATCGGCGACAGAAACAATA ACAACAATAATAGCTAATAAAGAACCGTACTTGTAATAGCGAAGTAAATA ATGTTAGTTGAAATGTTGCTACTGGAAACGGCACACCCATAATACCCATG CATACTATACTATATACTATACTATACAATACAATACTTTAAAACACTAT ACTGCTATATACAGTAGTGTATAGAAAGTTATATACATACATACATGCAT ACAACTAGTTTAATGTACACAATCAACATTCATGTTAAATTACGACTACG CAGAACCTGAGTTCATCGCTTCACGTCACTCCAATTATGCATCAAAATGC ATCTAAATAGCATTAGGCTGAGAATTGAGAACAGAGAACGTTTGTGAAAA CCAATTGTGTTTGTATGTGTAACAAAATGAAATTGCTAGATAATTATAGT TTATTCGTACATGTAATTTAATGTAATGTAATACCATGGCCCTTATTTAT GTTTGCTACGATGCAACAAAATCCACCAAGTCAGCAGTCAATCGGTACTT AAAGTCGGTACTTACAACGTTTATACCCCCTAACACAGCCCCCTATATAC ATACATACTTAGGTGCACACGGAAGGGGCATCTACATCGGCATTTACATG ATATTGTTGTAATAAACCAAACCGAAATGTGAACAGAATTTTTAATTGTA CTAAACTAAACACCGTTTTGTATTCGTATTCGTAATTGTATATCCGTAAT TGTATTTCGCGTACTCGTTAATGGTTAATGGTTAAGAGCGCCCAATCCTA ATCTAATCCAAAGTCATTTGTATCAACGGCCTTTACTTCTCGTTTACTTT ATACATCTACCAGGGAGTTTATAAAGATATAGAAAGTTATTGAATGAGAT GCAACGAAAACAATTACCACTGTACTTATTGAATATTGCAATTGCCTAAG CACCCCACTAAATGCATGGGAAGAGAAGACAACTATTTATGTAATCACTA AGCGTACTTACTGTCCACATTCATTTACTTGTTGTTGAATAAAAATTACC TTTTACCAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 17043752..17044910 | 849..2007 | 5750 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 17042407..17042737 | 520..850 | 1640 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 17042173..17042330 | 362..519 | 790 | 100 | Plus |
chr3L | 24539361 | chr3L | 17040750..17040906 | 1..157 | 770 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 17041454..17041587 | 229..362 | 670 | 100 | Plus |
chr3L | 24539361 | chr3L | 17041312..17041385 | 157..230 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 17054296..17055457 | 849..2010 | 5810 | 100 | Plus |
3L | 28110227 | 3L | 17052955..17053285 | 520..850 | 1655 | 100 | Plus |
3L | 28110227 | 3L | 17052721..17052878 | 362..519 | 790 | 100 | Plus |
3L | 28110227 | 3L | 17051298..17051454 | 1..157 | 785 | 100 | Plus |
3L | 28110227 | 3L | 17052002..17052135 | 229..362 | 670 | 100 | Plus |
3L | 28110227 | 3L | 17051860..17051933 | 157..230 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 17047396..17048557 | 849..2010 | 5810 | 100 | Plus |
3L | 28103327 | 3L | 17046055..17046385 | 520..850 | 1655 | 100 | Plus |
3L | 28103327 | 3L | 17045821..17045978 | 362..519 | 790 | 100 | Plus |
3L | 28103327 | 3L | 17044398..17044554 | 1..157 | 785 | 100 | Plus |
3L | 28103327 | 3L | 17045102..17045235 | 229..362 | 670 | 100 | Plus |
3L | 28103327 | 3L | 17044960..17045033 | 157..230 | 370 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17042173..17042330 | 362..519 | 100 | -> | Plus |
chr3L | 17042407..17042737 | 520..850 | 99 | -> | Plus |
chr3L | 17043754..17044004 | 851..1101 | 100 | == | Plus |
chr3L | 17040750..17040906 | 1..157 | 99 | -> | Plus |
chr3L | 17041313..17041384 | 158..229 | 100 | -> | Plus |
chr3L | 17041455..17041586 | 230..361 | 100 | -> | Plus |
chr3L | 17044057..17044910 | 1154..2007 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RB | 132..1032 | 15..919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RB | 132..1032 | 15..919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RB | 132..1032 | 15..919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RB | 132..1032 | 15..919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RB | 132..1032 | 15..919 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RA | 17..2023 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RA | 17..2023 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RA | 22..2028 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RA | 17..2023 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rogdi-RA | 22..2028 | 1..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17051298..17051454 | 1..157 | 100 | -> | Plus |
3L | 17051861..17051932 | 158..229 | 100 | -> | Plus |
3L | 17052003..17052134 | 230..361 | 100 | -> | Plus |
3L | 17052721..17052878 | 362..519 | 100 | -> | Plus |
3L | 17052955..17053285 | 520..850 | 100 | -> | Plus |
3L | 17054298..17055454 | 851..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17051298..17051454 | 1..157 | 100 | -> | Plus |
3L | 17051861..17051932 | 158..229 | 100 | -> | Plus |
3L | 17052003..17052134 | 230..361 | 100 | -> | Plus |
3L | 17052721..17052878 | 362..519 | 100 | -> | Plus |
3L | 17052955..17053285 | 520..850 | 100 | -> | Plus |
3L | 17054298..17055454 | 851..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17051298..17051454 | 1..157 | 100 | -> | Plus |
3L | 17051861..17051932 | 158..229 | 100 | -> | Plus |
3L | 17052003..17052134 | 230..361 | 100 | -> | Plus |
3L | 17052721..17052878 | 362..519 | 100 | -> | Plus |
3L | 17052955..17053285 | 520..850 | 100 | -> | Plus |
3L | 17054298..17055454 | 851..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17044398..17044554 | 1..157 | 100 | -> | Plus |
arm_3L | 17044961..17045032 | 158..229 | 100 | -> | Plus |
arm_3L | 17045103..17045234 | 230..361 | 100 | -> | Plus |
arm_3L | 17045821..17045978 | 362..519 | 100 | -> | Plus |
arm_3L | 17046055..17046385 | 520..850 | 100 | -> | Plus |
arm_3L | 17047398..17048554 | 851..2007 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17046055..17046385 | 520..850 | 100 | -> | Plus |
3L | 17047398..17048554 | 851..2007 | 100 | Plus | |
3L | 17045103..17045234 | 230..361 | 100 | -> | Plus |
3L | 17044398..17044554 | 1..157 | 100 | -> | Plus |
3L | 17044961..17045032 | 158..229 | 100 | -> | Plus |
3L | 17045821..17045978 | 362..519 | 100 | -> | Plus |
Translation from 112 to 918
> LD26833.hyp MKMLADTEREEALNLQIEFEWVLRQEVHAILKQLRSILVECAHRFPVPLY ENEGKKTEKFILTVSPDQLKAVLTLTGDAITQADISFKLCKAPSQTQRTS ITHDSPWKLQQVQDAANHLQTAINHIDDVDDSYHFKTSDEVLHVIGNILD ALQRGRNSLLVPKKKPIDELIKGRNMKSLVPNLPEDLAVSFYLQSHKLII AVYQLLNNQGTMRFDSRQAEASVQWLNDVLLLLMNGQKLCQQLKDKISVF SVYKDFTVGSRSPSALSY*
Translation from 112 to 918
> LD26833.pep MKMLADTEREEALNLQIEFEWVLRQEVHAILKQLRSILVECAHRFPVPLY ENEGKKTEKFILTVSPDQLKAVLTLTGDAITQADISFKLCKAPSQTQRTS ITHDSPWKLQQVQDAANHLQTAINHIDDVDDSYHFKTSDEVLHVIGNILD ALQRGRNSLLVPKKKPIDELIKGRNMKSLVPNLPEDLAVSFYLQSHKLII AVYQLLNNQGTMRFDSRQAEASVQWLNDVLLLLMNGQKLCQQLKDKISVF SVYKDFTVGSRSPSALSY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10104-PA | 339 | GF10104-PA | 72..339 | 1..268 | 1418 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13605-PA | 343 | GG13605-PA | 76..343 | 1..268 | 1426 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16403-PA | 352 | GH16403-PA | 84..352 | 1..268 | 1381 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rogdi-PA | 268 | CG7725-PA | 1..268 | 1..268 | 1365 | 100 | Plus |
rogdi-PB | 343 | CG7725-PB | 76..343 | 1..268 | 1365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12483-PA | 352 | GI12483-PA | 84..352 | 1..268 | 1382 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23965-PA | 174 | GA23965-PA | 111..174 | 205..268 | 341 | 100 | Plus |
Dpse\GA23965-PA | 174 | GA23965-PA | 72..110 | 1..39 | 191 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25687-PA | 344 | GM25687-PA | 77..344 | 1..268 | 1428 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14692-PA | 344 | GD14692-PA | 77..344 | 1..268 | 1428 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12387-PA | 350 | GJ12387-PA | 82..350 | 1..268 | 1380 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12664-PA | 370 | GK12664-PA | 103..370 | 1..268 | 1415 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19900-PA | 343 | GE19900-PA | 76..343 | 1..268 | 1426 | 99.6 | Plus |