BDGP Sequence Production Resources |
Search the DGRC for LD26875
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 268 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | fs(1)Ya-RA |
Protein status: | LD26875.pep: gold |
Preliminary Size: | 2222 |
Sequenced Size: | 2265 |
Gene | Date | Evidence |
---|---|---|
CG2707 | 2001-01-01 | Release 2 assignment |
CG2707 | 2001-11-29 | Blastp of sequenced clone |
CG2707 | 2003-01-01 | Sim4 clustering to Release 3 |
fs(1)Ya | 2008-04-29 | Release 5.5 accounting |
fs(1)Ya | 2008-08-15 | Release 5.9 accounting |
fs(1)Ya | 2008-12-18 | 5.12 accounting |
2265 bp (2265 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069542
> LD26875.complete TGTATGTCCATGTGTGTTAAGTTCGCAACTTGCGCATTTAATGTCGTTTT CCAATGTCCTAATCATGCGACAGCCCGACGAGGGCAAGTGCCACATTTGC AAGCGTGTCTTCTGTTGCGGCAAATGCCGCCAGAAGCATCAGTTCAAAGC GCACGCCATTGCTGTGCGCGAGCCATTGGGATTGAGGTCTGCCGGCGGCG GTATCATCGAGCATCGCCATCAAATGGAGTCCGGCGCGACCACCATCTAT GTGTTCTGTCCGATCTGCGAGCGGCGTCCCCTGCTGCTGCGCGAGGAGAT GCACGGCGAGCTGCTGGCCCACATCGAGACCTGCCACCTGCCGCTGCGAT GCCGCAAGTGCCAGCGCAACTACACGCGCGTCGATGACCTGCGGGAGTTC AGCAAGTGCGTGGACCAGCAGCAGAGCTGCACTGATGTCACCGGCGCCAC GGAGACATCGAAGGCGACGCTAAAGAAGGCAGCGAATAGCACCGCCATTT CAACGCAAACGTCGCCGTCCGTAACGCCCATTTCACTGATCAACATGCGC TGGAAGGCCAAGAGCCGTGTCACCCACGAGGAGTTCATCAGCGACAGCGT CTCCTCCATACGCAACCTGTCGTCGTTCAGCAACAGCTCCATTCGTCGCT CCATTGGCCAACTGGGCGTGAATCCGTCCGAAACGATGGAGAAGGGCAAG GTCATACGCTCGACGTCCACACCACTGCACGTGGAGTCCGTGTTCGCCAA GCCCAAGGAGCCGATTACCTTCAATGCTTCCACTGGCGGCCACGTGTCCA GCATCTACCACGAGGAGCCCAGTCCGACACCCGAAAGCAATCCCGTCCAG CAGCAGCAGCAGCAGCAGCAGCCGTTGCAGCAGCGCGCCTGGAAAATGGG CGCCCGCAACAAGATGAGCGCCGCAACGCCGCTGCGCCAGGTCATGTCCA AGAGCATTCAGAAGGCCTTCGTCGAGCACGGCGGCATGATGGTCCACCAG CCACCATCCGCAGTGGTGCAACGTCGCGTGCGCCTCGATCTCAGCGAGCA CAGTTCGCACGAGGCAGCAGGCTCGTCCGCTCTGGACCTGCGACTCTCGC CAGCTATGCGGCGCACCCAGAGCGAGTCCAGCGCCTCGGAGGTCAACAGC GGCAGCAGCTCCAGCTACAGCACCTCGCGGAATGCCGATCTATGCAAGCG GCAGTTCTTGCTGTCCGCACAGAAACTCACCACCGAGTCGATCATCATCA CGCGGACGAACTCCAGCTCACAGAAGACCTCTTCCACGGTGTACAACTCA TGCGAGAGCGTCGAGATCATACGCTCCACCTCGGAATCAGCGGAAGTGTG CCACGTGCCGGCCATAACGCCCATCCGTGTCACCGGTGCCGGCATCAACA AGAAGCAGATCAAGTTCGAGACGCCGCCCAAGAGCAGCCAACAGATGCGA TCGAATGGCGAGGGCGATGAAACCAAGGACCAGTTTTTCACGCCGGAACC GGGAACGCCGGAAATTCCAGAGCGTCGTCATCGCCAGGCGATTGTGCCGC GCCAGCTGAGCGGCGAGTTTTCGCCCAAGAAGGATAAGCCGAAGGAGAAG GGGCTGGCGGTGATGGCCCTGATCTCGCCGCCATTGCAGCAACCCAGGGT GCGTCCTCCGTTGCGGGAATGCCGTCAGCAGAGGGTCTATAGCGGCGTGC AGGATGTGGGCGAGCCGGAGGTCGTGGACGCAGAAGAGGAGGACGAGGTG TTCCGCCCCACAAACGCCTCCACGTGCAACGACAAAAAGCTGGAGGCGCC CAACTCCGGTCGCCTGTGGTCGCTGATGAGTTCCATGATGCGACTGCCGG CCAGCTTGCGCGGCGAACGCGAAAAGGACAGGGACAGGGACAGGGATTCG GATAAGGAGAACGCTGGTTCGGGCTCACTCATCCGTCGCTGCGCCTCCAT CGCTGGATCCCTGGTGCGCCCCAGTGCAAGGGACTCCTCCATGGAGGACC AGCAGTGCCTCAAGAGAAAGCGCACTCAGACGCTGGACAGCCAGTACTGT AGCCCGCTGTCGCCGTCCAGCTCCTCGAAGCGCTACCGCATCCGGCCCAG GGAGCCCATCGAGCGCATGCGTCGCCAGTAGGTTTTAAGCTTTTGCCTGC GAATCTGTGTTTTAATTGTGAAATTCTTCTTTTTTTTTATCGTTTAATAA ATGTTTGGTCTTGCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fs(1)Ya-RA | 2331 | fs(1)Ya-RA | 67..2285 | 1..2219 | 11095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2618120..2618201 | 1..82 | 100 | -> | Plus |
chrX | 2618259..2620393 | 83..2217 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 1..2091 | 41..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 1..2091 | 41..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 1..2091 | 41..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 1..2091 | 41..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 1..2091 | 41..2131 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 19..2235 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 19..2235 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 19..2235 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 19..2235 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fs(1)Ya-RA | 19..2235 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2724304..2724385 | 1..82 | 100 | -> | Plus |
X | 2724443..2726577 | 83..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2724304..2724385 | 1..82 | 100 | -> | Plus |
X | 2724443..2726577 | 83..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2724304..2724385 | 1..82 | 100 | -> | Plus |
X | 2724443..2726577 | 83..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2618337..2618418 | 1..82 | 100 | -> | Plus |
arm_X | 2618476..2620610 | 83..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2732541..2734675 | 83..2217 | 100 | Plus | |
X | 2732402..2732483 | 1..82 | 100 | -> | Plus |
Translation from 0 to 2130
> LD26875.hyp VCPCVLSSQLAHLMSFSNVLIMRQPDEGKCHICKRVFCCGKCRQKHQFKA HAIAVREPLGLRSAGGGIIEHRHQMESGATTIYVFCPICERRPLLLREEM HGELLAHIETCHLPLRCRKCQRNYTRVDDLREFSKCVDQQQSCTDVTGAT ETSKATLKKAANSTAISTQTSPSVTPISLINMRWKAKSRVTHEEFISDSV SSIRNLSSFSNSSIRRSIGQLGVNPSETMEKGKVIRSTSTPLHVESVFAK PKEPITFNASTGGHVSSIYHEEPSPTPESNPVQQQQQQQQPLQQRAWKMG ARNKMSAATPLRQVMSKSIQKAFVEHGGMMVHQPPSAVVQRRVRLDLSEH SSHEAAGSSALDLRLSPAMRRTQSESSASEVNSGSSSSYSTSRNADLCKR QFLLSAQKLTTESIIITRTNSSSQKTSSTVYNSCESVEIIRSTSESAEVC HVPAITPIRVTGAGINKKQIKFETPPKSSQQMRSNGEGDETKDQFFTPEP GTPEIPERRHRQAIVPRQLSGEFSPKKDKPKEKGLAVMALISPPLQQPRV RPPLRECRQQRVYSGVQDVGEPEVVDAEEEDEVFRPTNASTCNDKKLEAP NSGRLWSLMSSMMRLPASLRGEREKDRDRDRDSDKENAGSGSLIRRCASI AGSLVRPSARDSSMEDQQCLKRKRTQTLDSQYCSPLSPSSSSKRYRIRPR EPIERMRRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fs(1)Ya-PA | 696 | CG2707-PA | 1..696 | 14..709 | 3582 | 100 | Plus |
Translation from 40 to 2130
> LD26875.pep MSFSNVLIMRQPDEGKCHICKRVFCCGKCRQKHQFKAHAIAVREPLGLRS AGGGIIEHRHQMESGATTIYVFCPICERRPLLLREEMHGELLAHIETCHL PLRCRKCQRNYTRVDDLREFSKCVDQQQSCTDVTGATETSKATLKKAANS TAISTQTSPSVTPISLINMRWKAKSRVTHEEFISDSVSSIRNLSSFSNSS IRRSIGQLGVNPSETMEKGKVIRSTSTPLHVESVFAKPKEPITFNASTGG HVSSIYHEEPSPTPESNPVQQQQQQQQPLQQRAWKMGARNKMSAATPLRQ VMSKSIQKAFVEHGGMMVHQPPSAVVQRRVRLDLSEHSSHEAAGSSALDL RLSPAMRRTQSESSASEVNSGSSSSYSTSRNADLCKRQFLLSAQKLTTES IIITRTNSSSQKTSSTVYNSCESVEIIRSTSESAEVCHVPAITPIRVTGA GINKKQIKFETPPKSSQQMRSNGEGDETKDQFFTPEPGTPEIPERRHRQA IVPRQLSGEFSPKKDKPKEKGLAVMALISPPLQQPRVRPPLRECRQQRVY SGVQDVGEPEVVDAEEEDEVFRPTNASTCNDKKLEAPNSGRLWSLMSSMM RLPASLRGEREKDRDRDRDSDKENAGSGSLIRRCASIAGSLVRPSARDSS MEDQQCLKRKRTQTLDSQYCSPLSPSSSSKRYRIRPREPIERMRRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22453-PA | 703 | GF22453-PA | 1..701 | 1..694 | 2051 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18625-PA | 707 | GG18625-PA | 1..707 | 1..696 | 3109 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12381-PA | 728 | GH12381-PA | 1..726 | 7..694 | 1494 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fs(1)Ya-PA | 696 | CG2707-PA | 1..696 | 1..696 | 3582 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15874-PA | 729 | GI15874-PA | 2..727 | 16..694 | 1617 | 52 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19916-PA | 528 | GL19916-PA | 1..472 | 9..476 | 1544 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15438-PA | 679 | GA15438-PA | 1..678 | 9..695 | 2070 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19245-PA | 679 | GM19245-PA | 1..679 | 1..696 | 3115 | 92.5 | Plus |
Dsec\GM16933-PA | 575 | GM16933-PA | 1..575 | 119..696 | 2885 | 96.2 | Plus |
Dsec\GM11046-PA | 95 | GM11046-PA | 1..95 | 600..696 | 456 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24737-PA | 899 | GD24737-PA | 286..899 | 79..696 | 3075 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18701-PA | 752 | GJ18701-PA | 25..751 | 12..695 | 1656 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25598-PA | 728 | GK25598-PA | 7..725 | 5..694 | 1481 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16278-PA | 713 | GE16278-PA | 1..713 | 1..696 | 3077 | 88 | Plus |