BDGP Sequence Production Resources |
Search the DGRC for LD26912
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 269 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | IntS9-RA |
Protein status: | LD26912.pep: gold |
Preliminary Size: | 2107 |
Sequenced Size: | 2086 |
Gene | Date | Evidence |
---|---|---|
CG5222 | 2001-01-01 | Release 2 assignment |
CG5222 | 2001-09-19 | Blastp of sequenced clone |
CG5222 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5222 | 2008-04-29 | Release 5.5 accounting |
CG5222 | 2008-08-15 | Release 5.9 accounting |
CG5222 | 2008-12-18 | 5.12 accounting |
2086 bp (2086 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058574
> LD26912.complete CAAACTTGCATCGTCTAATCGGCACTGTCGGTTTAATAAAATGCGATTGT ATTGTCTCAGCGGGGACCTGGCCAAGCCATGTTATATCATTACCTTCAAG GGCCTGCGGATTATGCTGGACTGCGGTCTCACGGAGCAGACAGTCCTGAA TTTCCTTCCGCTGCCCTTCGTTCAGTCACTGAAGTGGTCCAATCTGCCCA ACTTCGTGCCCAGTCGGGATCATGATCCCCAAATGGATGGCGAGTTGAAG GACTGCTGTGGCCGGGTTTTCGTGGACTCGACGCCCGAGTTTAATCTACC CATGGACAAAATGCTGGATTTCAGCGAAGTGGATGTGATACTTATCTCGA ATTATCTTAATATGCTGGCCTTGCCGTATATCACGGAAAACACGGGGTTC AAGGGCAAAGTCTATGCCACGGAGCCAACGCTGCAGATCGGCCGATTTTT CCTGGAGGAGCTGGTGGACTATATCGAAGTGTCGCCCAAGGCGTGCACCG CGCGCTTGTGGAAGGAGAAGCTTCATCTGCTGCCCAGTCCCTTGAGCGAA GCCTTTCGCGCCAAGAAGTGGCGCACTATCTTTAGTCTTAAGGATGTCCA AGGCAGTCTGTCCAAGGTGACCATCATGGGCTACGACGAGAAGCTGGACA TCCTCGGAGCTTTTATCGCCACTCCTGTCAGCTCGGGCTACTGCCTGGGC TCGAGCAACTGGGTACTGAGCACGGCGCATGAAAAGATTTGCTATGTCAG TGGTTCCTCCACGTTGACCACACATCCGCGGCCCATCAATCAGTCGGCGC TGAAGCACGCCGATGTACTCATTATGACCGGACTGACGCAGGCGCCGACG GTAAATCCGGACACGAAGCTGGGCGAGCTCTGCATGAATGTGGCCTTGAC GATCCGCAACAATGGGTCTGCCTTGATTCCCTGTTATCCTTCGGGCGTTG TCTATGACCTCTTTGAGTGCCTCACCCAGAATTTGGAAAACGCTGGCCTA AACAATGTTCCCATGTTCTTTATTTCCCCTGTGGCAGACAGCTCCTTGGC GTATTCTAATATCCTGGCCGAGTGGCTTAGTTCCGCCAAGCAGAACAAAG TGTATCTTCCAGACGATCCTTTCCCACATGCCTTTTACCTTCGCAACAAC AAGCTGAAGCACTATAACCATGTGTTCTCCGAGGGCTTTAGCAAGGACTT CCGGCAGCCCTGCGTGGTCTTTTGTGGCCATCCTAGCTTGCGTTTCGGCG ACGCTGTTCACTTTATCGAGATGTGGGGCAATAACCCTAACAACTCCATC ATATTCACGGAGCCGGACTTTCCGTATCTGCAAGTACTGGCGCCCTTCCA ACCACTGGCCATGAAGGCTTTTTACTGTCCCATCGACACCTCTTTGAATT ATCAGCAGGCAAATAAGCTGATCAAGGAGTTGAAACCAAATGTGCTTGTC ATCCCAGAGGCATACACAAAACCACATCCCTCGGCCCCAAATTTGTTCAT TGAACAGCCGGATAAGAAGATAATAACGTTCAAGTGCGGCGAGATCATAC GTCTGCCATTAAAACGGAAGCTGGATCGAATTTACATTACCTCGGAACTG GCCCAAAAGATATCGCCAAAGGAGGTGGCGGCCGGCGTGACCTTCTCCAC ATTGACAGGAGTTTTGCAAGTTAAGGACAAGGTCCACTGCATCCAGCCAT GTGCGGATAGCGTTAAAGACGAGACCATCTCGAGCAACAGCGCTCCGACA AAGGAGGATGTGCTGAAGAACGTCAAATACGAGTATGGCAGCATTGATGT AGATGCAGTGATGAAGAAGCTGGCACAGGATGGCTTCTCCAACATCAAGC TAGACCGCACTGGCGGCGCTCTGACTCTGAACCTTGTCAATGAGGACACA GTCATTAAGTTCGAGGACAACGAGACGCATATTATCTGCGGCGGAAAGCC AACAACCCGGCTCAAGCTGCGAGACACCATCATGAAATGCTTACAGAGTT TTTAAAAACATAAATGTATTCCTTACACCTAAATAACAACACATCATTAC GCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16094107..16095265 | 1207..49 | 5780 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 16093203..16094052 | 2054..1205 | 4205 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 16095326..16095374 | 49..1 | 245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16104336..16105494 | 1207..49 | 5795 | 100 | Minus |
3L | 28110227 | 3L | 16103431..16104281 | 2055..1205 | 4255 | 100 | Minus |
3L | 28110227 | 3L | 16105555..16105603 | 49..1 | 245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16097436..16098594 | 1207..49 | 5795 | 100 | Minus |
3L | 28103327 | 3L | 16096531..16097381 | 2055..1205 | 4255 | 100 | Minus |
3L | 28103327 | 3L | 16098655..16098703 | 49..1 | 245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-A | 13424 | TART-A 13424bp | 10700..10873 | 277..109 | 128 | 57.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16093203..16094049 | 1208..2054 | 99 | <- | Minus |
chr3L | 16094107..16095264 | 50..1207 | 99 | <- | Minus |
chr3L | 16095326..16095374 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5222-RA | 1..1965 | 41..2005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5222-RA | 1..1965 | 41..2005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS9-RA | 1..1965 | 41..2005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5222-RA | 1..1965 | 41..2005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS9-RA | 1..1965 | 41..2005 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5222-RA | 9..2062 | 1..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5222-RA | 9..2062 | 1..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS9-RA | 25..2078 | 1..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5222-RA | 9..2062 | 1..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
IntS9-RA | 25..2078 | 1..2054 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16103432..16104278 | 1208..2054 | 100 | <- | Minus |
3L | 16104336..16105493 | 50..1207 | 100 | <- | Minus |
3L | 16105555..16105603 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16103432..16104278 | 1208..2054 | 100 | <- | Minus |
3L | 16104336..16105493 | 50..1207 | 100 | <- | Minus |
3L | 16105555..16105603 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16103432..16104278 | 1208..2054 | 100 | <- | Minus |
3L | 16104336..16105493 | 50..1207 | 100 | <- | Minus |
3L | 16105555..16105603 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16096532..16097378 | 1208..2054 | 100 | <- | Minus |
arm_3L | 16097436..16098593 | 50..1207 | 100 | <- | Minus |
arm_3L | 16098655..16098703 | 1..49 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16096532..16097378 | 1208..2054 | 100 | <- | Minus |
3L | 16097436..16098593 | 50..1207 | 100 | <- | Minus |
3L | 16098655..16098703 | 1..49 | 100 | Minus |
Translation from 0 to 2004
> LD26912.hyp KLASSNRHCRFNKMRLYCLSGDLAKPCYIITFKGLRIMLDCGLTEQTVLN FLPLPFVQSLKWSNLPNFVPSRDHDPQMDGELKDCCGRVFVDSTPEFNLP MDKMLDFSEVDVILISNYLNMLALPYITENTGFKGKVYATEPTLQIGRFF LEELVDYIEVSPKACTARLWKEKLHLLPSPLSEAFRAKKWRTIFSLKDVQ GSLSKVTIMGYDEKLDILGAFIATPVSSGYCLGSSNWVLSTAHEKICYVS GSSTLTTHPRPINQSALKHADVLIMTGLTQAPTVNPDTKLGELCMNVALT IRNNGSALIPCYPSGVVYDLFECLTQNLENAGLNNVPMFFISPVADSSLA YSNILAEWLSSAKQNKVYLPDDPFPHAFYLRNNKLKHYNHVFSEGFSKDF RQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEPDFPYLQVLAPFQ PLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNLFI EQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEVAAGVTFST LTGVLQVKDKVHCIQPCADSVKDETISSNSAPTKEDVLKNVKYEYGSIDV DAVMKKLAQDGFSNIKLDRTGGALTLNLVNEDTVIKFEDNETHIICGGKP TTRLKLRDTIMKCLQSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IntS9-PA | 654 | CG5222-PA | 1..654 | 14..667 | 3453 | 100 | Plus |
Cpsf73-PA | 684 | CG7698-PA | 28..422 | 22..484 | 205 | 20.7 | Plus |
Cpsf100-PA | 756 | CG1957-PA | 5..362 | 14..441 | 202 | 22.5 | Plus |
Translation from 40 to 2004
> LD26912.pep MRLYCLSGDLAKPCYIITFKGLRIMLDCGLTEQTVLNFLPLPFVQSLKWS NLPNFVPSRDHDPQMDGELKDCCGRVFVDSTPEFNLPMDKMLDFSEVDVI LISNYLNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELVDYIEVSPK ACTARLWKEKLHLLPSPLSEAFRAKKWRTIFSLKDVQGSLSKVTIMGYDE KLDILGAFIATPVSSGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPIN QSALKHADVLIMTGLTQAPTVNPDTKLGELCMNVALTIRNNGSALIPCYP SGVVYDLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAK QNKVYLPDDPFPHAFYLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSL RFGDAVHFIEMWGNNPNNSIIFTEPDFPYLQVLAPFQPLAMKAFYCPIDT SLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNLFIEQPDKKIITFKCG EIIRLPLKRKLDRIYITSELAQKISPKEVAAGVTFSTLTGVLQVKDKVHC IQPCADSVKDETISSNSAPTKEDVLKNVKYEYGSIDVDAVMKKLAQDGFS NIKLDRTGGALTLNLVNEDTVIKFEDNETHIICGGKPTTRLKLRDTIMKC LQSF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10658-PA | 655 | GF10658-PA | 1..655 | 1..654 | 3414 | 96.6 | Plus |
Dana\GF16269-PA | 756 | GF16269-PA | 5..362 | 1..428 | 222 | 23 | Plus |
Dana\GF18101-PA | 684 | GF18101-PA | 28..422 | 9..471 | 218 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13497-PA | 654 | GG13497-PA | 1..654 | 1..654 | 3476 | 98.8 | Plus |
Dere\GG11633-PA | 756 | GG11633-PA | 5..362 | 1..428 | 224 | 22.7 | Plus |
Dere\GG16362-PA | 684 | GG16362-PA | 28..422 | 9..471 | 215 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14706-PA | 657 | GH14706-PA | 1..657 | 1..654 | 3316 | 93.9 | Plus |
Dgri\GH10247-PA | 754 | GH10247-PA | 5..362 | 1..428 | 242 | 24 | Plus |
Dgri\GH19212-PA | 686 | GH19212-PA | 30..424 | 9..471 | 228 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IntS9-PA | 654 | CG5222-PA | 1..654 | 1..654 | 3453 | 100 | Plus |
Cpsf73-PA | 684 | CG7698-PA | 28..422 | 9..471 | 205 | 20.7 | Plus |
Cpsf100-PA | 756 | CG1957-PA | 5..362 | 1..428 | 202 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12252-PA | 659 | GI12252-PA | 1..659 | 1..654 | 3353 | 94.2 | Plus |
Dmoj\GI23051-PA | 754 | GI23051-PA | 5..362 | 1..428 | 243 | 24.5 | Plus |
Dmoj\GI24246-PA | 686 | GI24246-PA | 30..424 | 9..471 | 221 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25097-PA | 657 | GL25097-PA | 1..657 | 1..654 | 3316 | 93.8 | Plus |
Dper\GL23169-PA | 684 | GL23169-PA | 28..422 | 9..471 | 214 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18747-PA | 657 | GA18747-PA | 1..657 | 1..654 | 3316 | 93.8 | Plus |
Dpse\GA26549-PA | 731 | GA26549-PA | 5..362 | 1..428 | 221 | 23.4 | Plus |
Dpse\GA20526-PA | 684 | GA20526-PA | 28..422 | 9..471 | 214 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24446-PA | 654 | GM24446-PA | 1..654 | 1..654 | 3486 | 99.4 | Plus |
Dsec\GM12754-PA | 743 | GM12754-PA | 5..362 | 1..428 | 225 | 22.7 | Plus |
Dsec\GM18692-PA | 684 | GM18692-PA | 28..422 | 9..471 | 215 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12515-PA | 654 | GD12515-PA | 1..654 | 1..654 | 3482 | 99.1 | Plus |
Dsim\GD20157-PA | 684 | GD20157-PA | 28..422 | 9..471 | 215 | 20.7 | Plus |
Dsim\GD21403-PA | 664 | GD21403-PA | 21..270 | 180..428 | 176 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11484-PA | 658 | GJ11484-PA | 1..658 | 1..654 | 3343 | 94.1 | Plus |
Dvir\GJ24636-PA | 693 | GJ24636-PA | 5..362 | 1..428 | 237 | 24 | Plus |
Dvir\GJ10819-PA | 686 | GJ10819-PA | 30..424 | 9..471 | 221 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23916-PA | 659 | GK23916-PA | 1..659 | 1..654 | 3342 | 94.1 | Plus |
Dwil\GK13096-PA | 684 | GK13096-PA | 28..422 | 9..471 | 218 | 20.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19796-PA | 654 | GE19796-PA | 1..654 | 1..654 | 3486 | 99.2 | Plus |
Dyak\GE22809-PA | 654 | GE22809-PA | 1..654 | 1..654 | 3484 | 99.1 | Plus |
Dyak\GE26465-PA | 756 | GE23822-PA | 5..362 | 1..428 | 224 | 22.7 | Plus |
Dyak\GE26465-PB | 548 | GE26465-PB | 5..362 | 1..428 | 222 | 22.7 | Plus |
Dyak\GE25184-PA | 684 | GE25184-PA | 28..422 | 9..471 | 215 | 20.7 | Plus |