BDGP Sequence Production Resources |
Search the DGRC for LD26976
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 269 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | Hmgs-RB |
Protein status: | LD26976.pep: gold |
Preliminary Size: | 2707 |
Sequenced Size: | 2588 |
Gene | Date | Evidence |
---|---|---|
CG4311 | 2001-01-01 | Release 2 assignment |
CG4311 | 2001-07-04 | Blastp of sequenced clone |
CG4311 | 2003-01-01 | Sim4 clustering to Release 3 |
Hmgs | 2008-04-29 | Release 5.5 accounting |
Hmgs | 2008-08-15 | Release 5.9 accounting |
Hmgs | 2008-12-18 | 5.12 accounting |
2588 bp (2588 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051743
> LD26976.complete ATTTTCCGCTGCTCACGGGTTTTTCATTTAAGCACAAAAACCAAAACACT TTTCGCACATTTTCCCGACTCCCCGCCCCCAGCCCACACGATCATCAGCT GGATATTTCCAGATACATCCGCAGACCTCGCGGCAATCTGCCGTCGAACG AAACGCAACAAACTGGCGAACTCTTTTTTTCAGGGTCACACTGCTTCGAC AAAAAATCATAGCCACATTGCAAAAACTAATTTTCTCACTATCTTCAATA ATCTACAAGAGATTTGCGCACTTTTCCTGGTCAGCAGACCTACTGCGATG TAGTAATCGGTCTTTTTTTTCGGCGGGGGGTAACTTTTGCACTTTTCACG GCGACGTGGAAAACCCGCCGAATTAACTATTTCTTACGGTTGGCACTTAC TTTTCAGCGAATATGGTTGATTGTAAACGAAGCAGGTGTGCTTTTTGTGC TATTTGAAAACAGCAAGTGCGTTTTTCTTTGCCAAAAAATCAGCGCAAAT CGACCGCCGCCACCCACAAATGCGAACGAAATTGTGTGGTGAGAAAAGCG CTGGCGAAAAAAGTGACAGTTCACAATGCCCACGAGATTCACGTGATGGC GCCAGTGTTGCTTAGCCAGCGAGCCAAACAGCTGACTCCGCCAGCAGCTG TTCCAGCGCCGCGCGCTCTCCAACACTGCCTGCGGCTAAGGTGCCGCAGT TTCATTGCTTAATTTTATTCCAGATTAGTTTAGTTTAAAACATATCGCCC GCCCTGGACCATTAATATTAGCAAAGCTCAGGATTAAATAGATAACCGGA TACAATCATGGCATCCCACTGGCCCGAGAACGTTGGCATACGCGCCATCG AGATTCTCTTCCCCTCCCAGTACGTGGACCAAACGGAGCTGGAGACCTTC GATGGTGCCTCCGCGGGCAAGTACACAATTGGCCTGGGCCAGGCCAAGAT GGGCTTCTGCTCGGACCGCGAGGATGTCAACTCTCTCTGCCTGACGGTTG TGAGCCGCCTGCTGGAGCGGCAACATGTGAAGCACTCGGAGATCGGACGA CTGGAGGTGGGCACCGAGACCATTGTGGACAAGTCGAAGTCGGTGAAGTC CGTGCTGATGCAGCTGTTCGCCGAGAGCGGGAACACGGACATCGAGGGCA TCGACACCACGAACGCCTGTTACGGCGGCACGGCGGCGCTCTTCAATGCC GTCAATTGGGTGGAATCTTCTAGCTGGGACGGCCGCCTGGCTTTGGCCGT TTGTGCTGATATCGCCGTGTACGCCAAGGGTGCAGCGCGCCCAACTGGTG GTGCGGGTGCTGTGGCTATGCTGGTGGGTCCAAATGCGCCGCTTATCCTC GATCGTGGACTACGCGCAACGCACATGGAGCACGCCTACGACTTTTACAA GCCGGACCTCAGCTCCGAATACCCAACGGTAGATGGAAAGCTCTCTATTC AGTGCTACCTTTCTGCTCTGGACACCTGCTACAGGCTGTATCGCAAGAAG TTCGACCAGCAGCAGAAGGATACTTCCAAGCAGCCGGCCAGCCTGAGCAC CTTCGATGCTATCCTATTCCACACACCGTTCTGCAAGTTGGTGCAAAAAT CTGTGGGTCGCCTGAGCTTCAACGATTTCCTGCTGAGCAGTGAGGAGGAG CGAACGAAGCAGTTTCCCGACCTGGAACGTTTTAATACCGCTACCCTGGA GAGCACCTACTTTGATCGCGATGTGGAGAAGGCCTTCATGACGCAGTCCG CCAACATCTTTGCCAGCAAGACCAAGAAATCGCTGCTGCTGGCCAACCAA GTGGGCAATATGTACACACCCTCGGTGTACTCCGGTTTGGTGTCTCTGTT GATTAGCGGACCAGCCCAGGAGCTGGTGGGAAAGCGCATTGGTTTGTTCT CCTACGGATCCGGACTGGCTGCTTCCATGTACTCGATCAGCGTGACCCAG GATGCAGCTGCTTTCGAAAAGTTCGTCTCGCAGCTGGACTACGTGCAGCC GTTGCTGAATTCACGGGAGAAGGTTGCGCCCGAGCAGTTCTCCGCGCTGA TGGAGGTGCGGGAGAAGAACAACCATGCGGCGCCCTACACGCCAACGGGC AGCATCTCCGCACTGTTTCCCGGCACCTACTACCTGAAGGACGTGGATGC GCTGCATAGACGCACCTACGAGCGCACACCGACCATCAGCAATGGGGTGC ACTAACCCCGGGCTATGGTTCCTTCGGTTTGGTTTCGGTTTCGCCTACAA CTTGACAATAACTCTAACTCTCTCGACCAAACCCATGTAAGCAGTAGCTG TAGATGGTATCTATTTATAACTGGTATGATCCCGAGGGGTCGCTATCCTT TTTGCTCTTATTCGGGTCCTTGTCGCGTATATAGTACTACACTTCTTATT TATACAAGCTTGCGAATTAACTCTTTCATCCAGTCAGACCTTATTTATAT CATGGAACAAGTCTTAACTAGCGTCGGTACTGCAATCTATGCCTATAATT GTACAATACTTATACCTGTGTGTAATGCACACAATCAATTGTTTAATAAA CAATAAAAATCAACAAAGTCAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12223392..12224165 | 1..774 | 99 | -> | Plus |
chr2R | 12226747..12228542 | 775..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RB | 1..1398 | 808..2205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RB | 1..1398 | 808..2205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RD | 1..1398 | 808..2205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RB | 1..1398 | 808..2205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RD | 1..1398 | 808..2205 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RA | 1..2570 | 1..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RA | 1..2570 | 1..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RA | 1..2570 | 1..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RA | 1..2570 | 1..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmgs-RA | 1..2570 | 1..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16336090..16336863 | 1..774 | 100 | -> | Plus |
2R | 16339447..16341242 | 775..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16336090..16336863 | 1..774 | 100 | -> | Plus |
2R | 16339447..16341242 | 775..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16336090..16336863 | 1..774 | 100 | -> | Plus |
2R | 16339447..16341242 | 775..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12223595..12224368 | 1..774 | 100 | -> | Plus |
arm_2R | 12226952..12228747 | 775..2570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16337289..16338062 | 1..774 | 100 | -> | Plus |
2R | 16340646..16342441 | 775..2570 | 100 | Plus |
Translation from 807 to 2204
> LD26976.hyp MASHWPENVGIRAIEILFPSQYVDQTELETFDGASAGKYTIGLGQAKMGF CSDREDVNSLCLTVVSRLLERQHVKHSEIGRLEVGTETIVDKSKSVKSVL MQLFAESGNTDIEGIDTTNACYGGTAALFNAVNWVESSSWDGRLALAVCA DIAVYAKGAARPTGGAGAVAMLVGPNAPLILDRGLRATHMEHAYDFYKPD LSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLSTFD AILFHTPFCKLVQKSVGRLSFNDFLLSSEEERTKQFPDLERFNTATLEST YFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPSVYSGLVSLLIS GPAQELVGKRIGLFSYGSGLAASMYSISVTQDAAAFEKFVSQLDYVQPLL NSREKVAPEQFSALMEVREKNNHAAPYTPTGSISALFPGTYYLKDVDALH RRTYERTPTISNGVH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hmgs-PF | 465 | CG4311-PF | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PE | 465 | CG4311-PE | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PD | 465 | CG4311-PD | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PB | 465 | CG4311-PB | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PC | 465 | CG4311-PC | 1..465 | 1..465 | 2386 | 100 | Plus |
Translation from 807 to 2204
> LD26976.pep MASHWPENVGIRAIEILFPSQYVDQTELETFDGASAGKYTIGLGQAKMGF CSDREDVNSLCLTVVSRLLERQHVKHSEIGRLEVGTETIVDKSKSVKSVL MQLFAESGNTDIEGIDTTNACYGGTAALFNAVNWVESSSWDGRLALAVCA DIAVYAKGAARPTGGAGAVAMLVGPNAPLILDRGLRATHMEHAYDFYKPD LSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLSTFD AILFHTPFCKLVQKSVGRLSFNDFLLSSEEERTKQFPDLERFNTATLEST YFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPSVYSGLVSLLIS GPAQELVGKRIGLFSYGSGLAASMYSISVTQDAAAFEKFVSQLDYVQPLL NSREKVAPEQFSALMEVREKNNHAAPYTPTGSISALFPGTYYLKDVDALH RRTYERTPTISNGVH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13593-PA | 463 | GF13593-PA | 1..463 | 1..465 | 2323 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20599-PA | 465 | GG20599-PA | 1..465 | 1..465 | 2429 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19963-PA | 463 | GH19963-PA | 1..463 | 1..465 | 2218 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hmgs-PF | 465 | CG4311-PF | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PE | 465 | CG4311-PE | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PD | 465 | CG4311-PD | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PB | 465 | CG4311-PB | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PC | 465 | CG4311-PC | 1..465 | 1..465 | 2386 | 100 | Plus |
Hmgs-PA | 465 | CG4311-PA | 1..465 | 1..465 | 2386 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19921-PA | 465 | GI19921-PA | 1..465 | 1..465 | 2217 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10732-PA | 465 | GL10732-PA | 1..465 | 1..465 | 2259 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18098-PA | 465 | GA18098-PA | 1..465 | 1..465 | 2255 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21690-PA | 465 | GM21690-PA | 1..465 | 1..465 | 2458 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Hmgs-PA | 246 | GD11187-PA | 71..246 | 288..465 | 815 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15089-PA | 464 | GJ15089-PA | 1..464 | 1..465 | 2205 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21611-PA | 466 | GK21611-PA | 5..466 | 3..465 | 2186 | 86.6 | Plus |