Clone LD27033 Report

Search the DGRC for LD27033

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:270
Well:33
Vector:pOT2
Associated Gene/TranscriptCG8108-RA
Protein status:LD27033.pep: gold
Preliminary Size:2859
Sequenced Size:3198

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8108 2003-01-01 Sim4 clustering to Release 3
CG8108 2008-04-29 Release 5.5 accounting
CG8108 2008-08-15 Release 5.9 accounting
CG8108 2008-12-18 5.12 accounting

Clone Sequence Records

LD27033.complete Sequence

3198 bp (3198 high quality bases) assembled on 2005-06-20

GenBank Submission: BT023501

> LD27033.complete
ATTCCACAGAGCACGGTCACACTTCACTTTGTTCGCCATTGCTAGACAAA
AAATTGTTTCGAGCGAAAAAAGTAGCTGATAGAAAAGGTGAAAATCAGAA
GTTAAACGTTCAGTTAAAACTGAAAAACAGACAGAAAAGCAGTGCTTCAT
TGTGCCCATTAGTGAATAGTGTTAGAGCAGAGTATTTCCTTGTGCTGCAA
ACAGGAAGAGATTGGAATTAAAGATGCGTGGACGCGGCGGATTCATTCCA
CGTGGTGGTGGCACCACTCGCGGTGGCTACTACAATAATCGCAATTCCAG
CAACTACGTTAATACTCGCACCCAGGGCAATTACCGACCCAATAATGGCC
GCTACGAGAATAACTATCACAACAACAACAATCGCTACAACAACCACAAC
AACAGCGGCGGAGGAGCAGGAGGCAACAGCCACTACGACAACAGGAGTCG
GGACAAGTTCACTCACCACAACTCGAGCAGCGGGCGCTACGAGTCCAGCT
CCTCGAGCCACAAGCGCAGCTATGACTCATCTCGCGACCGCAGCGATGAT
CGCAAACGCCCGCGTCAAGACGATTACCGTCGCACGTCCTCGTCGAATGA
TCGCAGCGATCGACCCTCGTCCTCGTCGCAGAACATTGGCTCCTCGTCAT
CGAACTATCATCAGCGGAGCAGCACCGGCGGTGGTGGTAATAACGGCGGG
AGCTCGAGCTCCTACCGCCCACGCGATGATTCCACCAGCGGCAGCCGGCA
TCAGCGGGACGGATCGATGGGTCCTCCGAAGCGGATGATGCGTAGCGTGG
CCGGCACCAACTATATATCCCGACCCCGTGGCACAATGTCGATGAGGGGC
GGCATGATGCGCACCGGGATGCGGGTGGGAGGAATGCGCGTTGTGCGCAC
CAGGGTCAACGAGTCGAATGACCTGCGCACCATGCGCCGCCAGCTGCTCT
ATGCACAGCAGAAAGACCGGGCTCGCCTGCTCAAGATTCAGCAGCTGAAA
AGCTCGTTGCGACGACAACGCCAGGGCGGGAATTCCAGCGACGATTCCAG
CGGCAAAGAGGACAAGGACGGCGAAGATGCTGAGAAAAGCAAGAAGAAGA
AAGGCAAGGACAAGGACGCCGATGGAGGCGATGAATCCGACGACGACGAT
GACGATGAAGAAGACGATGATGAGAAGGACGAGAAGAGCAAGAAGACTTC
GCCTGGTAAAAAACGCAACAAGTCGGCCAACAACGAGGACAAGAGTGAGG
CCGAAGGTAACGATGATGACGACGATGATGATGATGAGCACGGTGATGGC
GATGACGATGATGACAAGGACCTAAATGAGTCCGATCCCAAGAGCGCCAA
GGCCGATGACGCCTCCGATGACGAGGATGTCAAGGTGAAGGGCGACGGTG
AGGACGGCGATGGTGACAAATCGGACGAAAAGGCCAAGTCATCGGTCGAG
AAGTCAGGTAAGAAGAAGGACAAAGACGACGCGAAGGACTCCAAGTCCAA
GAAGTCATCATCCACCAAGAAAGAGCGCACGTCTCGCAAGGACAAAGACA
AGGAATCATCGGGCGATGATCGTAGCAAGGAGCGACGTAGCTCCCGTCAT
CGGGATGAGGACCACAACAACCGCAAACGCAGCTTCATCAAACTCATTTG
CGTCCATTGCCGCATCAAGTGTGTTACATTTAAGGAGTATAACTACCATC
TGAACTCGCGCTCCCACAAGAACTCCATGCGTCAGGTGGCCCTCAACCAG
CGAGCTGACCTGCAGCGTATGCGTGCCCGCCAGCGCACCACACAGCGCGA
GATCGAGGAGAATAGCAAGGAGGAGCACGAGTCGCGCTACTGTCGTCTGT
GCCGCTTGGCCTACCGCCAGCCCAAGAATCTTCATCAGGCCTCCGAACAC
CACAAGACCATTAAGAAGTTCTTAATGCCCTATTGCGGCTCTTGCCATCT
GGCCTTCAAGAATGCCATGCTCTACGAGAACCACCGCTGCTCCCTGGATC
ACATTAGGAACAAGGCCCGCAACGATGAATCCGGATCGGATGATAGCGTG
GATGAGCGCGAGATAGATTTGAATAAATTCCACACTGTAGACTCGGTGGG
CGAGATCGATGTGGACATGATCGACGCCGATGTAGATGCCATGGTCACCG
AGGCGGAGGCCGCTCTGAAAAGCGAGGATGAGGAGACTCGCAAACGCGCT
CTGATTGGACCGGACTATATAAAGGTCATAGAGGCATTCTACTGCGAGCT
GTGCAATCACTATTCCGCCAAGGCTGATGATGTCTCGTTAGAGGACTACA
CCAAAAAGCATTGCATGCAGCACTCCCATGTGAAGGCTTTCCTGCGAAAC
AAGGAGGAGACCGAGAAGAAGAACAAGACGGAGGAGGGCGATGAGGACGA
TCACGATGATGACAAAAAGGCCGGTGATGATGACGCCGATGGCGATGAGG
ACATCGATGGCAAGTTAAACGAGGATGACGACGAGTACGATGATGATGGT
GATGCAGAAGTAGAAGAGGGTGATGCGACCAATGATAAAAAGATGTGGGA
GGAGGTGGACAAGGATCTGGGTGACCTCCTGGCAGAAGTAGAGACAAGAG
GTCATAAAGAAGATGAGGAGGATGAAGAGGACGAGTCTGTGCTTAACATT
GACATTGAAAGCGAGAAAAACAAGGCGAAAGACGGCAAAGAGGAAGCGAA
CGGCGATACCGATGAGGGAGCTGCGAAAGAAAACGCGCCGGTGGCCAAGT
CGCCGGAGAAAAAGCATGCTGCCTCTGCTCCAACCACACCAACGGCCAAG
ACCACCGCTGCTGCCAGCCAGCCGGCAAAGATGGCAACGCCCAAACCGAC
TGCAAAAGCAACCAAACCTGGTCCGGCTTCCACGAAGCGCAATGTCTTGG
TCAGCGTGAAGCGCACTTCGGCGGCCGCCATTAAAGCTGCCACTAAGTCC
GCCAGCAATGCGGCAGCCGCCGACTCCAAGTGAGCGACACTCGAGCGACA
GTAATATAATAGTAATAGCAATAACCAAACCCAGTGATTGGGTTGCTACA
AACATATTTCAAATATATAACTAAATTATAATGTGCTCAAACAACGTGCA
CTCGATAATGCCCAGCCAGAGCTGCTTCGACATCTGGCCGCCGAGCCCAG
CGTGCTTAATAAATGTCTAGACCTAACTAAAAAAAAAAAAAAAAAAAA

LD27033.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:33:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG8108-RA 3450 CG8108-RA 16..3196 1..3181 15905 100 Plus
CG8108.b 3428 CG8108.b 196..3174 203..3181 14895 100 Plus
CG8108-RB 3265 CG8108-RB 196..3174 203..3181 14895 100 Plus
CG8108.b 3428 CG8108.b 16..197 1..182 910 100 Plus
CG8108-RB 3265 CG8108-RB 16..197 1..182 910 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:19:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9860017..9860701 1001..1685 3410 99.9 Plus
chr3L 24539361 chr3L 9861226..9861879 2008..2661 3270 100 Plus
chr3L 24539361 chr3L 9861937..9862455 2660..3178 2520 99 Plus
chr3L 24539361 chr3L 9859075..9859514 563..1002 2170 99.5 Plus
chr3L 24539361 chr3L 9856826..9857169 181..524 1720 100 Plus
chr3L 24539361 chr3L 9860762..9861087 1683..2008 1630 100 Plus
chr3L 24539361 chr3L 9856391..9856572 1..182 895 99.5 Plus
chr3L 24539361 chr3L 9858080..9858132 520..572 250 98.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:19:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9868252..9868936 1001..1685 3425 100 Plus
3L 28110227 3L 9869445..9870098 2008..2661 3270 100 Plus
3L 28110227 3L 9870156..9870677 2660..3181 2610 100 Plus
3L 28110227 3L 9867305..9867744 563..1002 2170 99.5 Plus
3L 28110227 3L 9865056..9865399 181..524 1720 100 Plus
3L 28110227 3L 9868997..9869322 1683..2008 1630 100 Plus
3L 28110227 3L 9864621..9864802 1..182 910 100 Plus
3L 28110227 3L 9866310..9866362 520..572 250 98.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9861352..9862036 1001..1685 3425 100 Plus
3L 28103327 3L 9862545..9863198 2008..2661 3270 100 Plus
3L 28103327 3L 9863256..9863777 2660..3181 2610 100 Plus
3L 28103327 3L 9860405..9860844 563..1002 2170 99.5 Plus
3L 28103327 3L 9858156..9858499 181..524 1720 100 Plus
3L 28103327 3L 9862097..9862422 1683..2008 1630 100 Plus
3L 28103327 3L 9857721..9857902 1..182 910 100 Plus
3L 28103327 3L 9859410..9859462 520..572 250 98.1 Plus
Blast to na_te.dros performed 2019-03-16 02:19:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2884 300..443 156 59.7 Plus
invader2 5124 invader2 INVADER2 5124bp 634..793 960..1113 138 57.1 Plus

LD27033.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:20:02 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9861723..9861879 2505..2661 100 -> Plus
chr3L 9861227..9861598 2009..2380 100 == Plus
chr3L 9856391..9856572 1..182 99 -> Plus
chr3L 9856828..9857168 183..523 89 -> Plus
chr3L 9858084..9858131 524..571 100 -> Plus
chr3L 9859084..9859514 572..1002 100 -> Plus
chr3L 9860019..9860054 1003..1038 100 == Plus
chr3L 9860199..9860277 1183..1261 100 == Plus
chr3L 9860331..9860700 1315..1684 100 -> Plus
chr3L 9860764..9861087 1685..2008 100 -> Plus
chr3L 9861939..9862455 2662..3178 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:06:08 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RA 1..2760 224..2983 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:57:17 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RA 1..2760 224..2983 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:35:50 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RB 1..2760 224..2983 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:38:06 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RA 1..2760 224..2983 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:05:33 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RB 1..2760 224..2983 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:36:33 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RA 16..3193 1..3178 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:57:16 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RA 16..3193 1..3178 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:35:50 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RA 1..3160 19..3178 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:38:07 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RA 16..3193 1..3178 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:05:33 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
CG8108-RA 1..3160 19..3178 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:20:02 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9864621..9864802 1..182 100 -> Plus
3L 9865058..9865398 183..523 100 -> Plus
3L 9866314..9866361 524..571 100 -> Plus
3L 9867314..9867744 572..1002 100 -> Plus
3L 9868254..9868935 1003..1684 100 -> Plus
3L 9868999..9869322 1685..2008 100 -> Plus
3L 9869446..9870098 2009..2661 100 -> Plus
3L 9870158..9870674 2662..3178 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:20:02 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9864621..9864802 1..182 100 -> Plus
3L 9865058..9865398 183..523 100 -> Plus
3L 9866314..9866361 524..571 100 -> Plus
3L 9867314..9867744 572..1002 100 -> Plus
3L 9868254..9868935 1003..1684 100 -> Plus
3L 9868999..9869322 1685..2008 100 -> Plus
3L 9869446..9870098 2009..2661 100 -> Plus
3L 9870158..9870674 2662..3178 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:20:02 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9864621..9864802 1..182 100 -> Plus
3L 9865058..9865398 183..523 100 -> Plus
3L 9866314..9866361 524..571 100 -> Plus
3L 9867314..9867744 572..1002 100 -> Plus
3L 9868254..9868935 1003..1684 100 -> Plus
3L 9868999..9869322 1685..2008 100 -> Plus
3L 9869446..9870098 2009..2661 100 -> Plus
3L 9870158..9870674 2662..3178 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:35:50 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9857721..9857902 1..182 100 -> Plus
arm_3L 9858158..9858498 183..523 100 -> Plus
arm_3L 9859414..9859461 524..571 100 -> Plus
arm_3L 9860414..9860844 572..1002 100 -> Plus
arm_3L 9861354..9862035 1003..1684 100 -> Plus
arm_3L 9862099..9862422 1685..2008 100 -> Plus
arm_3L 9862546..9863198 2009..2661 100 -> Plus
arm_3L 9863258..9863774 2662..3178 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:16:41 Download gff for LD27033.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9858158..9858498 183..523 100 -> Plus
3L 9859414..9859461 524..571 100 -> Plus
3L 9860414..9860844 572..1002 100 -> Plus
3L 9861354..9862035 1003..1684 100 -> Plus
3L 9862099..9862422 1685..2008 100 -> Plus
3L 9862546..9863198 2009..2661 100 -> Plus
3L 9863258..9863774 2662..3178 100   Plus
3L 9857721..9857902 1..182 100 -> Plus

LD27033.pep Sequence

Translation from 223 to 2982

> LD27033.pep
MRGRGGFIPRGGGTTRGGYYNNRNSSNYVNTRTQGNYRPNNGRYENNYHN
NNNRYNNHNNSGGGAGGNSHYDNRSRDKFTHHNSSSGRYESSSSSHKRSY
DSSRDRSDDRKRPRQDDYRRTSSSNDRSDRPSSSSQNIGSSSSNYHQRSS
TGGGGNNGGSSSSYRPRDDSTSGSRHQRDGSMGPPKRMMRSVAGTNYISR
PRGTMSMRGGMMRTGMRVGGMRVVRTRVNESNDLRTMRRQLLYAQQKDRA
RLLKIQQLKSSLRRQRQGGNSSDDSSGKEDKDGEDAEKSKKKKGKDKDAD
GGDESDDDDDDEEDDDEKDEKSKKTSPGKKRNKSANNEDKSEAEGNDDDD
DDDDEHGDGDDDDDKDLNESDPKSAKADDASDDEDVKVKGDGEDGDGDKS
DEKAKSSVEKSGKKKDKDDAKDSKSKKSSSTKKERTSRKDKDKESSGDDR
SKERRSSRHRDEDHNNRKRSFIKLICVHCRIKCVTFKEYNYHLNSRSHKN
SMRQVALNQRADLQRMRARQRTTQREIEENSKEEHESRYCRLCRLAYRQP
KNLHQASEHHKTIKKFLMPYCGSCHLAFKNAMLYENHRCSLDHIRNKARN
DESGSDDSVDEREIDLNKFHTVDSVGEIDVDMIDADVDAMVTEAEAALKS
EDEETRKRALIGPDYIKVIEAFYCELCNHYSAKADDVSLEDYTKKHCMQH
SHVKAFLRNKEETEKKNKTEEGDEDDHDDDKKAGDDDADGDEDIDGKLNE
DDDEYDDDGDAEVEEGDATNDKKMWEEVDKDLGDLLAEVETRGHKEDEED
EEDESVLNIDIESEKNKAKDGKEEANGDTDEGAAKENAPVAKSPEKKHAA
SAPTTPTAKTTAAASQPAKMATPKPTAKATKPGPASTKRNVLVSVKRTSA
AAIKAATKSASNAAAADSK*

LD27033.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10577-PA 910 GF10577-PA 360..899 368..908 1724 70.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15416-PA 913 GG15416-PA 1..910 1..915 3125 91.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16046-PA 990 GH16046-PA 377..989 329..918 1447 57.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG8108-PA 919 CG8108-PA 1..919 1..919 4839 100 Plus
CG8108-PB 919 CG8108-PB 1..919 1..919 4839 100 Plus
l(2)01289-PG 1191 CG9432-PG 680..948 223..466 315 29.7 Plus
l(2)01289-PM 1193 CG9432-PM 680..948 223..466 315 29.7 Plus
l(2)01289-PG 1191 CG9432-PG 804..989 270..460 259 31.3 Plus
l(2)01289-PM 1193 CG9432-PM 804..989 270..460 259 31.3 Plus
SRm160-PA 954 CG11274-PA 363..885 2..476 252 22.8 Plus
l(2)01289-PG 1191 CG9432-PG 828..996 270..442 245 31.4 Plus
l(2)01289-PM 1193 CG9432-PM 828..996 270..442 245 31.4 Plus
Mur89F-PC 2158 CG4090-PC 561..1016 11..471 227 19.2 Plus
Mur89F-PB 2159 CG4090-PB 561..1016 11..471 227 19.2 Plus
TfIIFalpha-PA 577 CG10281-PA 188..410 246..463 220 29.7 Plus
CG6066-PA 463 CG6066-PA 2..341 106..463 207 25.3 Plus
CG13185-PD 5526 CG13185-PD 4752..4968 271..466 200 27.5 Plus
Mur89F-PC 2158 CG4090-PC 257..724 4..470 198 18.7 Plus
Mur89F-PB 2159 CG4090-PB 257..724 4..470 198 18.7 Plus
Top1-PD 970 CG6146-PD 19..422 34..463 196 21.2 Plus
Top1-PC 974 CG6146-PC 23..426 34..463 196 21.2 Plus
Top1-PA 974 CG6146-PA 23..426 34..463 196 21.2 Plus
Sh3beta-PE 485 CG8582-PE 139..363 272..463 194 24.9 Plus
CG7971-PG 1062 CG7971-PG 227..512 259..538 193 22.6 Plus
CG7971-PA 1062 CG7971-PA 227..512 259..538 193 22.6 Plus
CG7971-PC 1107 CG7971-PC 227..512 259..538 193 22.6 Plus
CG7971-PF 1655 CG7971-PF 452..737 259..538 193 22.6 Plus
Strn-Mlck-PT 7905 CG44162-PT 4498..5177 223..884 191 19.4 Plus
Strn-Mlck-PV 7944 CG44162-PV 4537..5216 223..884 191 19.4 Plus
Strn-Mlck-PS 8216 CG44162-PS 4498..5177 223..884 191 19.4 Plus
Strn-Mlck-PU 8255 CG44162-PU 4537..5216 223..884 191 19.4 Plus
Strn-Mlck-PT 7905 CG44162-PT 3978..4720 223..919 190 20.1 Plus
Strn-Mlck-PV 7944 CG44162-PV 4017..4759 223..919 190 20.1 Plus
Strn-Mlck-PS 8216 CG44162-PS 3978..4720 223..919 190 20.1 Plus
Strn-Mlck-PU 8255 CG44162-PU 4017..4759 223..919 190 20.1 Plus
Top1-PD 970 CG6146-PD 61..390 22..346 188 22.9 Plus
Top1-PC 974 CG6146-PC 65..394 22..346 188 22.9 Plus
Top1-PA 974 CG6146-PA 65..394 22..346 188 22.9 Plus
CG7839-PA 1174 CG7839-PA 967..1153 287..468 188 28.7 Plus
CG7971-PG 1062 CG7971-PG 254..662 45..469 184 19.8 Plus
CG7971-PA 1062 CG7971-PA 254..662 45..469 184 19.8 Plus
CG7971-PC 1107 CG7971-PC 254..662 45..469 184 19.8 Plus
CG7971-PF 1655 CG7971-PF 479..887 45..469 184 19.8 Plus
Strn-Mlck-PT 7905 CG44162-PT 3783..4525 223..919 183 19.4 Plus
Strn-Mlck-PV 7944 CG44162-PV 3822..4564 223..919 183 19.4 Plus
Strn-Mlck-PS 8216 CG44162-PS 3783..4525 223..919 183 19.4 Plus
Strn-Mlck-PU 8255 CG44162-PU 3822..4564 223..919 183 19.4 Plus
CG2839-PA 826 CG2839-PA 318..622 227..538 183 17.9 Plus
Strn-Mlck-PT 7905 CG44162-PT 3494..4132 255..847 182 19.5 Plus
Strn-Mlck-PV 7944 CG44162-PV 3533..4171 255..847 182 19.5 Plus
Strn-Mlck-PS 8216 CG44162-PS 3494..4132 255..847 182 19.5 Plus
Strn-Mlck-PU 8255 CG44162-PU 3533..4171 255..847 182 19.5 Plus
CG2839-PA 826 CG2839-PA 276..552 245..538 181 16.6 Plus
CG13185-PD 5526 CG13185-PD 4598..4780 279..454 180 25.7 Plus
CG9915-PC 820 CG9915-PC 127..557 2..423 180 21.9 Plus
CG9915-PC 820 CG9915-PC 243..579 2..368 180 23.2 Plus
CG9915-PB 820 CG9915-PB 127..557 2..423 180 21.9 Plus
CG9915-PB 820 CG9915-PB 243..579 2..368 180 23.2 Plus
l(2)01289-PG 1191 CG9432-PG 890..1070 270..447 179 30.8 Plus
CG13185-PD 5526 CG13185-PD 4621..4828 268..467 179 26.5 Plus
BOD1-PC 1109 CG5514-PC 570..1056 29..533 178 21.1 Plus
BOD1-PA 1109 CG5514-PA 570..1056 29..533 178 21.1 Plus
BOD1-PD 1150 CG5514-PD 570..1056 29..533 178 21.1 Plus
BOD1-PB 1150 CG5514-PB 570..1056 29..533 178 21.1 Plus
BOD1-PE 1151 CG5514-PE 570..1056 29..533 178 21.1 Plus
l(2)01289-PG 1191 CG9432-PG 739..856 709..831 177 32.5 Plus
l(2)01289-PG 1191 CG9432-PG 785..901 709..837 177 31 Plus
l(2)01289-PM 1193 CG9432-PM 785..901 709..837 177 31 Plus
l(2)01289-PM 1193 CG9432-PM 739..856 709..831 177 32.5 Plus
TfIIFalpha-PA 577 CG10281-PA 208..468 225..468 174 24.1 Plus
CG13096-PB 681 CG13096-PB 524..681 223..385 174 29.1 Plus
CG13096-PA 681 CG13096-PA 524..681 223..385 174 29.1 Plus
CG1703-PB 901 CG1703-PB 15..257 248..444 174 26.2 Plus
CG1703-PA 901 CG1703-PA 15..257 248..444 174 26.2 Plus
CG7971-PG 1062 CG7971-PG 152..521 246..612 173 20.5 Plus
CG7971-PA 1062 CG7971-PA 152..521 246..612 173 20.5 Plus
CG7971-PC 1107 CG7971-PC 152..521 246..612 173 20.5 Plus
CG7971-PF 1655 CG7971-PF 377..746 246..612 173 20.5 Plus
CG2839-PA 826 CG2839-PA 284..586 221..538 173 16.6 Plus
hang-PD 1959 CG32575-PD 1629..1863 268..452 173 24.9 Plus
hang-PC 2223 CG32575-PC 1893..2127 268..452 173 24.9 Plus
kis-PF 5191 CG3696-PF 1514..1972 90..570 173 19.2 Plus
kis-PE 5252 CG3696-PE 1514..1972 90..570 173 19.2 Plus
kis-PA 5322 CG3696-PA 1514..1972 90..570 173 19.2 Plus
kis-PD 5343 CG3696-PD 1514..1972 90..570 173 19.2 Plus
kis-PC 5517 CG3696-PC 1514..1972 90..570 173 19.2 Plus
Claspin-PB 1465 CG32251-PB 125..372 225..470 172 22.8 Plus
Claspin-PA 1465 CG32251-PA 125..372 225..470 172 22.8 Plus
Ctr9-PA 1150 CG2469-PA 854..1131 221..470 171 24.5 Plus
Ctr9-PB 1150 CG2469-PB 854..1131 221..470 171 24.5 Plus
CG7971-PG 1062 CG7971-PG 222..638 69..470 170 19.5 Plus
CG7971-PA 1062 CG7971-PA 222..638 69..470 170 19.5 Plus
CG7971-PC 1107 CG7971-PC 222..638 69..470 170 19.5 Plus
CG7971-PF 1655 CG7971-PF 447..863 69..470 170 19.5 Plus
CG2839-PA 826 CG2839-PA 288..724 74..538 170 14.4 Plus
Fkbp39-PA 357 CG6226-PA 91..248 307..451 170 28.6 Plus
CG31797-PA 868 CG31797-PA 404..619 247..463 170 20.3 Plus
ncm-PA 1330 CG12750-PA 961..1232 270..538 170 23.4 Plus
Sh3beta-PE 485 CG8582-PE 181..399 265..462 169 28.8 Plus
ncm-PA 1330 CG12750-PA 941..1215 270..531 169 22.6 Plus
l(2)01289-PG 1191 CG9432-PG 817..933 711..832 168 35.5 Plus
l(2)01289-PG 1191 CG9432-PG 842..990 708..854 168 24.2 Plus
l(2)01289-PM 1193 CG9432-PM 817..933 711..832 168 35.5 Plus
l(2)01289-PM 1193 CG9432-PM 842..990 708..854 168 24.2 Plus
CG31797-PA 868 CG31797-PA 426..643 254..468 168 23.1 Plus
TfIIFalpha-PA 577 CG10281-PA 217..453 245..470 167 27 Plus
Fkbp39-PA 357 CG6226-PA 91..244 274..438 167 26.7 Plus
CG12017-PB 522 CG12017-PB 170..342 267..437 167 26 Plus
CG12017-PD 584 CG12017-PD 170..342 267..437 167 26 Plus
CG9915-PC 820 CG9915-PC 88..554 10..475 166 20.7 Plus
CG9915-PB 820 CG9915-PB 88..554 10..475 166 20.7 Plus
Mur89F-PC 2158 CG4090-PC 631..1014 4..433 165 17.5 Plus
Mur89F-PB 2159 CG4090-PB 631..1014 4..433 165 17.5 Plus
CG13185-PD 5526 CG13185-PD 4866..5045 267..460 164 25 Plus
CG9915-PC 820 CG9915-PC 59..447 92..470 162 22.6 Plus
CG9915-PB 820 CG9915-PB 59..447 92..470 162 22.6 Plus
l(2)01289-PG 1191 CG9432-PG 719..840 707..837 161 29.9 Plus
l(2)01289-PM 1193 CG9432-PM 719..840 707..837 161 29.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12311-PA 915 GI12311-PA 1..914 1..913 2321 65.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:42:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12499-PA 917 GL12499-PA 1..917 1..919 2619 71.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:42:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20830-PA 917 GA20830-PA 1..917 1..919 2622 71.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25189-PA 896 GM25189-PA 1..881 1..904 3160 94.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14221-PA 859 GD14221-PA 1..844 1..904 3016 89.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:42:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13247-PA 925 GJ13247-PA 1..924 1..913 2318 65.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16782-PA 1022 GK16782-PA 492..1021 437..914 1447 58.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:42:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21724-PA 916 GE21724-PA 1..916 1..919 3003 91 Plus

LD27033.hyp Sequence

Translation from 223 to 2982

> LD27033.hyp
MRGRGGFIPRGGGTTRGGYYNNRNSSNYVNTRTQGNYRPNNGRYENNYHN
NNNRYNNHNNSGGGAGGNSHYDNRSRDKFTHHNSSSGRYESSSSSHKRSY
DSSRDRSDDRKRPRQDDYRRTSSSNDRSDRPSSSSQNIGSSSSNYHQRSS
TGGGGNNGGSSSSYRPRDDSTSGSRHQRDGSMGPPKRMMRSVAGTNYISR
PRGTMSMRGGMMRTGMRVGGMRVVRTRVNESNDLRTMRRQLLYAQQKDRA
RLLKIQQLKSSLRRQRQGGNSSDDSSGKEDKDGEDAEKSKKKKGKDKDAD
GGDESDDDDDDEEDDDEKDEKSKKTSPGKKRNKSANNEDKSEAEGNDDDD
DDDDEHGDGDDDDDKDLNESDPKSAKADDASDDEDVKVKGDGEDGDGDKS
DEKAKSSVEKSGKKKDKDDAKDSKSKKSSSTKKERTSRKDKDKESSGDDR
SKERRSSRHRDEDHNNRKRSFIKLICVHCRIKCVTFKEYNYHLNSRSHKN
SMRQVALNQRADLQRMRARQRTTQREIEENSKEEHESRYCRLCRLAYRQP
KNLHQASEHHKTIKKFLMPYCGSCHLAFKNAMLYENHRCSLDHIRNKARN
DESGSDDSVDEREIDLNKFHTVDSVGEIDVDMIDADVDAMVTEAEAALKS
EDEETRKRALIGPDYIKVIEAFYCELCNHYSAKADDVSLEDYTKKHCMQH
SHVKAFLRNKEETEKKNKTEEGDEDDHDDDKKAGDDDADGDEDIDGKLNE
DDDEYDDDGDAEVEEGDATNDKKMWEEVDKDLGDLLAEVETRGHKEDEED
EEDESVLNIDIESEKNKAKDGKEEANGDTDEGAAKENAPVAKSPEKKHAA
SAPTTPTAKTTAAASQPAKMATPKPTAKATKPGPASTKRNVLVSVKRTSA
AAIKAATKSASNAAAADSK*

LD27033.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG8108-PA 919 CG8108-PA 1..919 1..919 4839 100 Plus
CG8108-PB 919 CG8108-PB 1..919 1..919 4839 100 Plus
l(2)01289-PG 1191 CG9432-PG 680..948 223..466 315 29.7 Plus
l(2)01289-PM 1193 CG9432-PM 680..948 223..466 315 29.7 Plus
l(2)01289-PG 1191 CG9432-PG 804..989 270..460 259 31.3 Plus
l(2)01289-PM 1193 CG9432-PM 804..989 270..460 259 31.3 Plus
SRm160-PA 954 CG11274-PA 363..885 2..476 252 22.8 Plus
l(2)01289-PG 1191 CG9432-PG 828..996 270..442 245 31.4 Plus
l(2)01289-PM 1193 CG9432-PM 828..996 270..442 245 31.4 Plus
l(2)01289-PG 1191 CG9432-PG 890..1070 270..447 179 30.8 Plus
l(2)01289-PG 1191 CG9432-PG 739..856 709..831 177 32.5 Plus
l(2)01289-PG 1191 CG9432-PG 785..901 709..837 177 31 Plus
l(2)01289-PM 1193 CG9432-PM 739..856 709..831 177 32.5 Plus
l(2)01289-PM 1193 CG9432-PM 785..901 709..837 177 31 Plus
l(2)01289-PG 1191 CG9432-PG 817..933 711..832 168 35.5 Plus
l(2)01289-PG 1191 CG9432-PG 842..990 708..854 168 24.2 Plus
l(2)01289-PM 1193 CG9432-PM 817..933 711..832 168 35.5 Plus
l(2)01289-PM 1193 CG9432-PM 842..990 708..854 168 24.2 Plus
l(2)01289-PG 1191 CG9432-PG 719..840 707..837 161 29.9 Plus
l(2)01289-PM 1193 CG9432-PM 719..840 707..837 161 29.9 Plus