BDGP Sequence Production Resources |
Search the DGRC for LD27103
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 271 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | dnk-RA |
Protein status: | LD27103.pep: gold |
Preliminary Size: | 1366 |
Sequenced Size: | 1159 |
Gene | Date | Evidence |
---|---|---|
CG5452 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5452 | 2002-05-01 | Blastp of sequenced clone |
CG5452 | 2003-01-01 | Sim4 clustering to Release 3 |
dnk | 2008-04-29 | Release 5.5 accounting |
dnk | 2008-08-15 | Release 5.9 accounting |
dnk | 2008-12-18 | 5.12 accounting |
1159 bp (1159 high quality bases) assembled on 2002-05-01
GenBank Submission: AY102689
> LD27103.complete ACCAGGCGGGTTGAATCAGTCACCATATTCCCGCCGCCGTGTACAGTACT CCATCGAATCCGGAACAATCAACTTCAACCGCGATCCGTTGCTGCTGTGC TGTACCTAAAACAGTTAGTAAAACTCCCAATCTCACGTGCAGATCGCCGA TTATCCGGACTGATGGCGGAGGCAGCATCCTGTGCCCGAAAGGGGACCAA GTACGCCGAGGGCACCCAGCCCTTCACCGTCCTCATCGAGGGCAACATCG GCAGCGGGAAGACCACGTATTTGAACCACTTCGAGAAGTACAAGAACGAC ATTTGCCTGCTGACCGAGCCCGTCGAGAAGTGGCGCAACGTCAACGGGGT AAATCTGCTGGAGCTGATGTACAAAGATCCCAAGAAGTGGGCCATGCCCT TTCAGAGTTATGTCACGCTGACCATGCTGCAGTCGCACACCGCCCCAACC AACAAGAAGCTAAAAATAATGGAGCGCTCCATTTTTAGCGCTCGCTATTG CTTCGTGGAGAACATGCGACGAAACGGCTCGCTGGAGCAGGGCATGTACA ATACGCTGGAGGAGTGGTACAAGTTCATCGAAGAGTCCATTCACGTGCAG GCGGACCTCATCATATATCTGCGCACCTCGCCGGAGGTGGCGTACGAACG CATCCGGCAGCGGGCTCGTTCTGAGGAGAGCTGCGTGCCGCTTAAGTACC TTCAGGAGCTGCATGAGTTGCACGAGGACTGGTTGATACACCAGAGACGA CCGCAGTCGTGCAAGGTCCTAGTCCTCGATGCCGATCTGAACCTGGAAAA CATTGGCACCGAGTACCAGCGCTCGGAGAGCAGCATATTCGACGCCATCT CAAGTAACCAACAGCCCTCGCCGGTTCTGGTGTCGCCCAGCAAGCGCCAG AGGGTCGCCAGATAACCATTATCCCATTAGTACCTAATTGTGTGTAGTAC AGACGTTTAAAATAATATTATAAGAGGCCTAGACGAGCCGATTCGCGGGA CAAAGGCAGAAACTTACACTTCGAGCCAATGATTAACACATTCGTATATT AACAATTATAATCCACATTATATTCTCTTCACAGCAACTAGTATGTAAGC CCAAAATATTGTAATAAAAACTGTGAATGTTTATGTTAAAAAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 14805328..14805821 | 1..494 | 2425 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 14806224..14806597 | 764..1137 | 1840 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 14805897..14806170 | 494..767 | 1370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 18981410..18981903 | 1..494 | 2470 | 100 | Plus |
3R | 32079331 | 3R | 18982306..18982682 | 764..1140 | 1870 | 99.7 | Plus |
3R | 32079331 | 3R | 18981979..18982252 | 494..767 | 1370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 18722241..18722734 | 1..494 | 2470 | 100 | Plus |
3R | 31820162 | 3R | 18723137..18723513 | 764..1140 | 1870 | 99.7 | Plus |
3R | 31820162 | 3R | 18722810..18723083 | 494..767 | 1370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\BuT5 | 669 | Dbuz\BuT5 BUT5 669bp | 610..663 | 920..974 | 119 | 70.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14805328..14805821 | 1..494 | 99 | -> | Plus |
chr3R | 14805898..14806168 | 495..765 | 100 | -> | Plus |
chr3R | 14806226..14806597 | 766..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 1..753 | 163..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 1..753 | 163..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 1..753 | 163..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 1..753 | 163..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 1..753 | 163..915 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 10..1146 | 1..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 10..1146 | 1..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 1..1123 | 15..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 10..1146 | 1..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dnk-RA | 1..1123 | 15..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18981980..18982250 | 495..765 | 100 | -> | Plus |
3R | 18981410..18981903 | 1..494 | 100 | -> | Plus |
3R | 18982308..18982679 | 766..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18981980..18982250 | 495..765 | 100 | -> | Plus |
3R | 18981410..18981903 | 1..494 | 100 | -> | Plus |
3R | 18982308..18982679 | 766..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18981980..18982250 | 495..765 | 100 | -> | Plus |
3R | 18981410..18981903 | 1..494 | 100 | -> | Plus |
3R | 18982308..18982679 | 766..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14807132..14807625 | 1..494 | 100 | -> | Plus |
arm_3R | 14807702..14807972 | 495..765 | 100 | -> | Plus |
arm_3R | 14808030..14808401 | 766..1137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18722241..18722734 | 1..494 | 100 | -> | Plus |
3R | 18722811..18723081 | 495..765 | 100 | -> | Plus |
3R | 18723139..18723510 | 766..1137 | 99 | Plus |
Translation from 0 to 914
> LD27103.hyp TRRVESVTIFPPPCTVLHRIRNNQLQPRSVAAVLYLKQLVKLPISRADRR LSGLMAEAASCARKGTKYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKND ICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPT NKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQ ADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRR PQSCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSKRQ RVAR*
Translation from 162 to 914
> LD27103.pep MAEAASCARKGTKYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLL TEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTNKKL KIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQADLI IYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSC KVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSKRQRVAR *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23227-PA | 249 | GF23227-PA | 1..249 | 1..250 | 1219 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23099-PA | 250 | GG23099-PA | 1..250 | 1..250 | 1322 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14441-PA | 252 | GH14441-PA | 1..249 | 1..247 | 1087 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dnk-PB | 250 | CG5452-PB | 1..250 | 1..250 | 1308 | 100 | Plus |
dnk-PA | 250 | CG5452-PA | 1..250 | 1..250 | 1308 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10047-PA | 252 | GI10047-PA | 1..251 | 1..249 | 1171 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23445-PA | 250 | GL23445-PA | 1..250 | 1..250 | 1194 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18891-PA | 250 | GA18891-PA | 1..250 | 1..250 | 1189 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13644-PA | 250 | GM13644-PA | 1..250 | 1..250 | 1343 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19261-PA | 250 | GD19261-PA | 1..250 | 1..250 | 1343 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22572-PA | 252 | GJ22572-PA | 1..251 | 1..249 | 1149 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12063-PA | 253 | GK12063-PA | 5..253 | 4..250 | 1156 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25572-PA | 250 | GE25572-PA | 1..250 | 1..250 | 1318 | 97.2 | Plus |