BDGP Sequence Production Resources |
Search the DGRC for LD27256
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 272 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8237-RA |
Protein status: | LD27256.pep: gold |
Preliminary Size: | 1294 |
Sequenced Size: | 1220 |
Gene | Date | Evidence |
---|---|---|
CG8237 | 2001-01-01 | Release 2 assignment |
CG8237 | 2002-03-29 | Blastp of sequenced clone |
CG8237 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8237 | 2008-04-29 | Release 5.5 accounting |
CG8237 | 2008-08-15 | Release 5.9 accounting |
CG8237 | 2008-12-18 | 5.12 accounting |
1220 bp (1220 high quality bases) assembled on 2002-03-29
GenBank Submission: AY094806
> LD27256.complete CAATACACGTCAACTTGTATAAATAAATAAAAGCCAGCCAAATAACAAAA TCGATCATTGTGAGACTGAGAAAATGGGTGAACAAGGCGAGGAGACGGGT CAGAAGCTTACGGAGCGCTCCACCAAGGAAGCCTACTTCGAAAGCCTCGC CGAGTGGGCCAAACAGGCGACGCTGGCCCAGAATGCGATGCTCATGTTTC CCTACTACCTGATGGCCAACTACCCGACCATGTTCCCGGGACTGCCTTCT TCCGCTGCTCTCCAAGCAGCCGCCATGGGACAACCCCAAGCACTGGTTCA GGGCTCGGCTGCTGCGCCGGGAGAACCAGCTGCAGAGCCTCGTTTGCCTG CGCCAAACTTCAGCGGCCTGCGGATATTGGGCGAGGCGGCCCAGCTGGAT ATCATACAGCGTCTTGGCGGCTACGAGTACGTTCTGTCACCTTTTTGGAA GCGCGCCGTGGCGGAGACCATCGATATGTTCATCCTTTTCATTGTGAAAA TCATCATTACCTTCGGGGTGGTCAACCTGTTCAACATAGAGTTCGATGAG GACGTGATTCGGCGCACCCTGGACCAAGAAGACCTCTTTTCGAACTTCTT TGACACATCACTAGATTTTATTTCGATGTCCACCGACCTCCTGCTAATCG AAATGCTGACCAAGTTCATCGTTTGCTGCTACGAAGCGCTGTGGACATAC CTATACCAAGGGGCTACGCCGGGCAAGTCGCTGATGAAGATACGCATATA CTATGTGGAAGCAGTGATGCCGCTTCAGGGGCCGCCCCTTCCACAGTTCG TCCTCCAGCCGCAGAGGGAGCCGATGAGGGCTCTGCTTTATCCGCCACAG ACTCCCTCGCTGATGCGCTCCTTCGCCCGCGCGCTGATCAAGAACCTGGG GATGACCCTGCTCTTCCCCATTTGCGTGTTGATGGTCTTCTTCAAGAACA ATCGCACCGCCTACGACGTCCTAACCAAAACGATTGTGGTGGAGAGCAAT TCCATTGCCGTGTTCCGCACCCAAGGGCAAGCGCAGCGCAATAATCGCTG AGGACGGCACTTAAACCAGCCAAAGTGTGTAGGAATGGCGCACTCCTATG CACTTCCTATGCACATATAAATAGACTTGTTAATGATAAATTTAATGTCG TTATGTACTGCTGTCGTGTGAAATAAAATAAAATATCACATGAATACCTC AGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4813240..4814441 | 1..1202 | 6010 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8925689..8926892 | 1..1204 | 6020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8926888..8928091 | 1..1204 | 6020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4813240..4814441 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 1..978 | 74..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 1..978 | 74..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 1..978 | 74..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 1..978 | 74..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 1..978 | 74..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 1..1202 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 1..1202 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 19..1220 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 1..1202 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8237-RA | 19..1220 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8925689..8926890 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8925689..8926890 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8925689..8926890 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4813194..4814395 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8926888..8928089 | 1..1202 | 100 | Plus |
Translation from 73 to 1050
> LD27256.pep MGEQGEETGQKLTERSTKEAYFESLAEWAKQATLAQNAMLMFPYYLMANY PTMFPGLPSSAALQAAAMGQPQALVQGSAAAPGEPAAEPRLPAPNFSGLR ILGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDMFILFIVKIIITFGVV NLFNIEFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEMLTKFIV CCYEALWTYLYQGATPGKSLMKIRIYYVEAVMPLQGPPLPQFVLQPQREP MRALLYPPQTPSLMRSFARALIKNLGMTLLFPICVLMVFFKNNRTAYDVL TKTIVVESNSIAVFRTQGQAQRNNR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12216-PA | 334 | GF12216-PA | 1..332 | 1..322 | 1104 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23398-PA | 329 | GG23398-PA | 1..328 | 1..323 | 1341 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23111-PA | 351 | GH23111-PA | 52..339 | 14..309 | 799 | 57 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8237-PA | 325 | CG8237-PA | 1..325 | 1..325 | 1662 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18934-PA | 340 | GI18934-PA | 23..323 | 13..309 | 903 | 61 | Plus |
Dmoj\GI15853-PA | 310 | GI15853-PA | 15..301 | 10..309 | 561 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11681-PA | 320 | GL11681-PA | 1..320 | 1..325 | 1095 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20920-PA | 320 | GA20920-PA | 1..320 | 1..325 | 1092 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21078-PA | 332 | GM21078-PA | 1..332 | 1..325 | 1558 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15381-PA | 132 | GD15381-PA | 1..132 | 194..325 | 656 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21306-PA | 335 | GJ21306-PA | 9..317 | 2..309 | 875 | 59.7 | Plus |
Dvir\GJ10341-PA | 303 | GJ10341-PA | 22..291 | 16..310 | 697 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22098-PA | 341 | GK22098-PA | 17..332 | 5..316 | 961 | 59.3 | Plus |
Dwil\GK17239-PA | 320 | GK17239-PA | 28..313 | 13..317 | 375 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19239-PA | 323 | GE19239-PA | 1..322 | 1..323 | 1306 | 82.7 | Plus |
Translation from 73 to 1050
> LD27256.hyp MGEQGEETGQKLTERSTKEAYFESLAEWAKQATLAQNAMLMFPYYLMANY PTMFPGLPSSAALQAAAMGQPQALVQGSAAAPGEPAAEPRLPAPNFSGLR ILGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDMFILFIVKIIITFGVV NLFNIEFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEMLTKFIV CCYEALWTYLYQGATPGKSLMKIRIYYVEAVMPLQGPPLPQFVLQPQREP MRALLYPPQTPSLMRSFARALIKNLGMTLLFPICVLMVFFKNNRTAYDVL TKTIVVESNSIAVFRTQGQAQRNNR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8237-PA | 325 | CG8237-PA | 1..325 | 1..325 | 1662 | 100 | Plus |