BDGP Sequence Production Resources |
Search the DGRC for LD27268
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 272 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3662-RA |
Protein status: | LD27268.pep: gold |
Sequenced Size: | 1669 |
Gene | Date | Evidence |
---|---|---|
CG3662 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3662 | 2004-10-04 | Blastp of sequenced clone |
CG3662 | 2008-04-29 | Release 5.5 accounting |
CG3662 | 2008-08-15 | Release 5.9 accounting |
CG3662 | 2008-12-18 | 5.12 accounting |
1669 bp (1669 high quality bases) assembled on 2004-10-04
GenBank Submission: BT016099
> LD27268.complete TCACACTGGCTTGTCTGGATCGAGATTTCAGCTCGTCAACAATTGCGCAC TAAATTTTCAGTAAAAACAAACAAGTTGGTCGTGCGGAGGCATCAAGAAC ACAGCATACGAGCAGCCATGACAATTCTGGGAAAACTGCGGGGACAGCCC ACGGACCAGGAGAAGGTGCCCCTGCCCATGAACCTCAACGACGAGGCGCT CATGCACCATGGCTCCCTAATCGCACCCAAGGTTGCTTACAGCGATAATG AAGCCGACGCGGAATCCATGGTCTTCAACCGGCCGCAGCACCATTGCATC AAATCCTTTCTGCTGTTCCTGATCGCCGTAGTCGTGATGCTCCTGGGTGT CCTGGGCGGATGGACCCTGTACCGAGTGTACGCTCCGTCGCATAGCAGCA TGCGCTACCACGCCCTGTGCGAGATCCCCTATCCGGAGGACTCGATGGAG ATGGCGCGGGTATATCCGCGCACCGTGGAACCGTTCGCCCTGAACTGGCG CTCCTTGCTACCCGAGCTCGCGCAACCGATGCCCAACAGTGGATCGCTGG ACGAGAGCCACTTCCGCGAGGACATCGAACTGGACGGTGACAGCGATGAC GAGGGCTACGCACGCGTGGACGTGCCCGACTTCAAGGATGGACGTCGTGG TCGCTTCATGCACGACTTCAAGGAGAACCAGTCGGCCATTATCGACACTA CCACCGGACGGTGCTTCATCATGCCCTTGGATCGGGACACGACCCTGCCC CCGACCAGCTTTGTGGATCTCATAAAGAAGATGAGCACTGGCTACTACAA CATAGATACGGAGCGCGTGCGGCGCCAGATGCGTGTGGTCATGCCCCGCA TCACCGATGTCTCGCTCATCTCGGAGCGGATTGCCAACGAGTGCTTCGAT ATGAAGGTCTACATGATGGAGAAGTTCGTCTCAGGCGTCTCGAAGAGATC GGCTGATCCGCTGCCGGAGTCAGCCAAGTACGCCGAGTTCATGGGCAAGG GCGTCATCGAGTACGACCTGGCCAACATCGCCGAGGTGGAGGCCTACGAG GCCAACGAGGCTAGGCAACAGGCCTGAGCTTTGGAGGAGGAGGAGGATCT TTTAAGCTACAACACCCATATGATAACACAACCTAAACAAATTATTACTT AGAATCGATTTATACATACACAGAGCCATGCCTACAAGTCTAGATCTGGT TACCACTGGTTAGCAGGACACACACCCACTCCGGGTGGATATATCATCAT TGGCCAAGCGAGTTTAGCAAATTATAGACCCTAGTAAGGAAGCGTAACGA AAATGTACCTAGAACGCAATCAAAAGCGATCGACGAAATTGTGACAAATA CGTGAAATGTATTAGCCTCGAGGGCGGATTGAAAGGATACGGAGAGATTG GATCGGTACACGCGCACAGACACACTGCGGCATTCCAAGTACATATTTTA TATATATGCTCTTAAACTCTATTCTAACAATTAATGTATAGAACGGATTC AGAACGAAGCTATTTACAGCAAAAACAACCTGAGGGCGGAAAACATGGCA ACTATCAGCATGCGTAAGAGAAACAAGTAAATTAATCTAAATGTTCTTTA AACTACTTACATGTATTAAACGCGAATTTGTGATCTTTAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3662-RA | 1831 | CG3662-RA | 177..1815 | 1..1639 | 8195 | 100 | Plus |
CG3662-RC | 1750 | CG3662-RC | 177..1614 | 1..1438 | 7190 | 100 | Plus |
CG3662-RB | 2873 | CG3662-RB | 1444..2857 | 226..1639 | 7070 | 100 | Plus |
CG3662-RB | 2873 | CG3662-RB | 21..245 | 1..225 | 1125 | 100 | Plus |
CG3662-RC | 1750 | CG3662-RC | 1615..1734 | 1520..1639 | 600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 822714..823425 | 226..937 | 3515 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 823492..824193 | 937..1638 | 3495 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 821306..821530 | 1..225 | 1125 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 821306..821530 | 1..225 | 100 | -> | Plus |
chr2L | 822714..823425 | 226..937 | 99 | -> | Plus |
chr2L | 823493..824193 | 938..1638 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 1..960 | 118..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RC | 1..960 | 118..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 1..960 | 118..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 1..960 | 118..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 1..960 | 118..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 18..1655 | 1..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 18..1655 | 1..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 14..1651 | 1..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 18..1655 | 1..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3662-RA | 14..1651 | 1..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 821435..821659 | 1..225 | 100 | -> | Plus |
2L | 822858..823569 | 226..937 | 100 | -> | Plus |
2L | 823637..824337 | 938..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 821435..821659 | 1..225 | 100 | -> | Plus |
2L | 822858..823569 | 226..937 | 100 | -> | Plus |
2L | 823637..824337 | 938..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 821435..821659 | 1..225 | 100 | -> | Plus |
2L | 822858..823569 | 226..937 | 100 | -> | Plus |
2L | 823637..824337 | 938..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 821435..821659 | 1..225 | 100 | -> | Plus |
arm_2L | 822858..823569 | 226..937 | 100 | -> | Plus |
arm_2L | 823637..824337 | 938..1638 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 821435..821659 | 1..225 | 100 | -> | Plus |
2L | 822858..823569 | 226..937 | 100 | -> | Plus |
2L | 823637..824337 | 938..1638 | 100 | Plus |
Translation from 0 to 1076
> LD27268.hyp SHWLVWIEISARQQLRTKFSVKTNKLVVRRHQEHSIRAAMTILGKLRGQP TDQEKVPLPMNLNDEALMHHGSLIAPKVAYSDNEADAESMVFNRPQHHCI KSFLLFLIAVVVMLLGVLGGWTLYRVYAPSHSSMRYHALCEIPYPEDSME MARVYPRTVEPFALNWRSLLPELAQPMPNSGSLDESHFREDIELDGDSDD EGYARVDVPDFKDGRRGRFMHDFKENQSAIIDTTTGRCFIMPLDRDTTLP PTSFVDLIKKMSTGYYNIDTERVRRQMRVVMPRITDVSLISERIANECFD MKVYMMEKFVSGVSKRSADPLPESAKYAEFMGKGVIEYDLANIAEVEAYE ANEARQQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3662-PD | 319 | CG3662-PD | 1..319 | 40..358 | 1668 | 100 | Plus |
CG3662-PC | 319 | CG3662-PC | 1..319 | 40..358 | 1668 | 100 | Plus |
CG3662-PA | 319 | CG3662-PA | 1..319 | 40..358 | 1668 | 100 | Plus |
CG3662-PB | 269 | CG3662-PB | 1..269 | 90..358 | 1410 | 100 | Plus |
Translation from 117 to 1076
> LD27268.pep MTILGKLRGQPTDQEKVPLPMNLNDEALMHHGSLIAPKVAYSDNEADAES MVFNRPQHHCIKSFLLFLIAVVVMLLGVLGGWTLYRVYAPSHSSMRYHAL CEIPYPEDSMEMARVYPRTVEPFALNWRSLLPELAQPMPNSGSLDESHFR EDIELDGDSDDEGYARVDVPDFKDGRRGRFMHDFKENQSAIIDTTTGRCF IMPLDRDTTLPPTSFVDLIKKMSTGYYNIDTERVRRQMRVVMPRITDVSL ISERIANECFDMKVYMMEKFVSGVSKRSADPLPESAKYAEFMGKGVIEYD LANIAEVEAYEANEARQQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15077-PA | 325 | GF15077-PA | 1..322 | 1..318 | 1489 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24748-PA | 319 | GG24748-PA | 1..319 | 1..319 | 1642 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11245-PA | 331 | GH11245-PA | 1..325 | 1..318 | 1297 | 72.6 | Plus |
Dgri\GH23910-PA | 260 | GH23910-PA | 1..244 | 37..273 | 959 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3662-PD | 319 | CG3662-PD | 1..319 | 1..319 | 1668 | 100 | Plus |
CG3662-PC | 319 | CG3662-PC | 1..319 | 1..319 | 1668 | 100 | Plus |
CG3662-PA | 319 | CG3662-PA | 1..319 | 1..319 | 1668 | 100 | Plus |
CG3662-PB | 269 | CG3662-PB | 1..269 | 51..319 | 1410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21849-PA | 326 | GI21849-PA | 1..323 | 1..318 | 1320 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19499-PA | 328 | GL19499-PA | 1..326 | 1..318 | 1396 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17596-PA | 328 | GA17596-PA | 1..326 | 1..318 | 1396 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16770-PA | 319 | GM16770-PA | 1..319 | 1..319 | 1704 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17797-PA | 320 | GJ17797-PA | 1..317 | 1..318 | 1333 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24634-PA | 335 | GK24634-PA | 1..332 | 1..318 | 1303 | 73.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17121-PA | 319 | GE17121-PA | 1..319 | 1..319 | 1665 | 96.2 | Plus |