Clone LD27278 Report

Search the DGRC for LD27278

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:272
Well:78
Vector:pOT2
Associated Gene/Transcriptrudhira-RB
Protein status:LD27278.pep: gold
Preliminary Size:3900
Sequenced Size:4113

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1905 2001-01-01 Release 2 assignment
CG32663 2002-01-03 Blastp of sequenced clone
CG32663 2003-01-01 Sim4 clustering to Release 3
CG32663 2008-04-29 Release 5.5 accounting
CG32663 2008-08-15 Release 5.9 accounting
CG32663 2008-12-18 5.12 accounting

Clone Sequence Records

LD27278.complete Sequence

4113 bp (4113 high quality bases) assembled on 2002-01-03

GenBank Submission: AY075392

> LD27278.complete
ATCAGACGCAGTGTCTCCATAGAAGGCAAAAAAGAGAGAAAGAGAGTAGG
CGAGAGAAGCTAGCGAGCGAGGTTGCCACCCGCCACCCACTGCCATCAGC
CATCCGCCATCTGCCACCCCCAGCCGGCCGCTGCCCATTGACCTCCAGTG
TGGAGGCACTGCATCATTGGCAGCAGCTGTGGTAGCAGCTAGAAGAGGAG
CGATTCCGGCGGCCAGCAGTCACCACCGGCCATCCCCCCCAGCAGCCGCT
GCATCATGTCCGCGGACTCGCCACGCCGTCATCCCTCTGGCGTGGTCGGT
TCCGGCATTGGATTGGGCTCCGGATCCGGTACTGGCTTGGGTTCCGGCTC
TACCGGTGGCAGCAAATCGGGCGCCGCCGTGCCGGCCATTGTACCTCCGC
AAACAGTGTCGGATCGATCGATCCTTGACTCGGCCATTGGTTTCATCAAC
GATGTAACGCTGGCCAATCAGCCGGTGCAAGATCCCAAGGACACGATCAC
CTGGGCCCGTTTCGAAACGTGTGCGGATGTAAGCGATCCGCGTTTCGGTG
ATGACTGGGAACTGGAGGGAAATGCAGCGCCACCACTATTGCTGATTCTC
GGCTACGGTCTGGGCGTTCAAGTGTGGGCCATACCAGCCAACGGCGAGGC
GGTCGAGGTGCTATCCTGGCGTCACGGCGTCGTCACTGCGCTTCGTGTGC
TGCCCACGCCGGCCACGGCTGCTGCTTTGGATGAGAATGGTCGGGCGGAT
GAGCCGGTCGATTCATTTGCCGAGAAACGTCCCCTGGTGGCGTTCGTCGA
CGGAGGCAGTGCAGCGGCCAGTGGTCTACTGGCTGGCAGCTCGGGATTGG
GTCTGGGTGGCGGCGGCGGAGGAGTAACAACAGTTGGCGGATCGGTTGGA
GGTGTCAGCGGCATCGGTGTGTCGGCCTCTGCCCAATTCAGTGCCGTAAA
CTTCATGTCCCTCAAAACGGGTGTCCAGGTGAAGACGATCAAGTTCAAGA
ACGCCGTGCTGGACATCCAGGCCAATCGATCGGCGGTGGTCATAACGTTC
CACGAACGGATTGCCGTCTTTGATGCCAGGACACTGGAGGACCGTCTCAC
TATTACCACCTGCTATCCCAGTCCGGGGATCAACCCCAATCCCATTGCTC
TGGGACCGCGCTGGCTGGCGTATGCGGAGCATAAACTGCTGCACTCCAAG
CGCAGCGGAGGCGGATGCGATGGCGAGGGCGTTCCCAGCTACACGGCCAC
TGTTCTCAATGCGGCCAAATCCCTGAGCAAGGGACTGCGAGAGTTTGGTG
AACAGGTGGCCGCCGGCCTAACGGGCACCACCGCCGGCAGCGGTGCCAGC
TCCAAGAGCAGCAGCTTCGACTCGGCCAGCGGCGGTCCGGATGCCAAGCA
GTCCGGTGTGGTCACCATCATCGATGTGAAGCATCCGGTGAAGGACTACA
GCCCCACGTCGGGTACTCCGTTGAGCTCGACGGCTGGCTCACAGGGCGGC
GGCGATCCCATCGTTGCTCACTTTGTGGCCCACAGCGAGGCTCTGGTGGC
CATGGAGTTCGACAGCTCCGGTATGCTGCTTCTCACCGCCGATCGACGCG
GTCATGATTTCCACGTCTTTCGCGTACAACCGCATCCTGTCGGTCCCAGC
CTGGCTGCCGTGCACCACCTGTACGTGCTACATCGCGGCGACACTAGCGC
CAAGGTGCAGCACATCGCCTTCTCGCTGGACTCGCGCTGGGCTGCTGTGT
CCACGTTGCGCGGCACCACCCACGTCTTCCCAATTACGCCCTACGGCGGC
GCCATGGGCGTACGCACGCACACCTCGCTGCATGTGGTCAATAAGCTGTC
CCGCTTCCACCGGAGCGCCGGCCTCGGAGCCGATGGACGCTCCAGTTCGC
CGATCTCGCACTCGGAGAGCACGACGTTCGTGCAGTCACTGCAGCCGTAT
CATAATCCCACTTTGCCGCCGTATCCGCGGCCGTCGGTAGTGCAGCCGCT
GGCCCAGCTGCGCCAGCCCTTCACTCTAGGATCACCGCCAGGATCGGCGG
GTCTGGGCGGTGGTGTGGGCGGCGGTGGAGTGATGGGCTCTGGCGTAAGT
GCCGGTGGTCATGGAGTCGGTGTTGGTGTAGGCAGCAACAGCCAACGGCA
GCGACAACGCCTCTCCTCGCTGTCAGACGATAGCGGCAAACCACTGAGTG
TCTGCTCCATCTTCGCCAAGTCGCGCTCCTGGCTGCTGGAGCCACCGATG
GCGACGCGAGAGCAGCCGCATCGTGTCCAGCGCAAGGCGGTGGACTCGCT
CTTCGTGATGGCCGGCCACGGGGCGCTTATCCAGTACGATCTGGACACGA
AGCTAGCCTCACATGTTGCCAAAGAGAAGATTTGTGATGACACGCCCATC
GAGCTGGAGGTTGAGGCTCGCGCCCAGTGGAATCTGGGACGGCGCAAGGA
TGGATCTCAAGAAATCGCACCACCGCTGGGGCTGGACAATTGGCTGATTA
AGGATCGCCATGCCAGCCTGCTGTTGGACAGCGCCAATCAATTCGACGAT
CCGGACGAGCGAACCGAAAGCTGGTTGGCCCAGGTGGAGATCATTACGCA
CGCTGGTCCCCACCGCCGGCTGTGGATGGGACCGCAGTTCGTCTTCAAGA
ACTACAATACGCCCAGCGGTTCCAATCTGAACCACGTCGATGCAGAGGCT
GTGGAAATTGGCGTGAGCAAGACGACGACCACCACGTTGCCCTCGACGGC
GGCTTCATCTGCCTTGGGATTGGGTACGATTATAGGCAAGGATCGGTCCA
GTCCGCTCAATATGCCCCTAAGTGCAGCCACGTCGGTGGGAGGAGCTGGC
ATTGGCAGTTCGGCGGTCACAGGACGCAGCGGTGCCGGTGTACCGGTTCT
CATCGAATCTGGATCGTACAGCAGCATTGAGCAGAGTCCCAAGTTGATGG
ATCGCTTCCGACATGGTCACTTGGATTCGGATTATGGCCACGGCGATACA
CGCCTGAAGGAGGATTTGGCGGATGCCATGCGAGAATCGCCATCAACGGC
AGCAGCTCGACGTGAGACTACCGGCAACTATTTTACCACGGATCAGCTGG
ATGGCTTGGCTCTTAACAACAATAATAACATCAACAACAACATAATCCCA
ACCAAAGACAATGCGAGTCCCAATCCCAATACCAATACCAATCCCAATGC
GATCCCGAGCAGCAACAAGGTCCAGAAAGCGGAGGTCACCGATGCCGTAG
ATTATCCCATTCGCCATTCGTACGGCGATCACGGCGAACTGTCGACGGTG
GTGAACATCGAGGTGTTCGACGACCAGCTAAGCATGAGCAGCATCAGCAC
CAATAGTCGCCTCTCTCTGGAGGGACCGCCATCGCAATCGTCGCCGCCGC
TCAGCCTGACCAATGGCCTGATGGACACCAATCTGATGCACTTCAGCGAG
AGTGTGACTGGCACTGGAGTGGCGCAGGCGCAGGTGCATGGAAGGGGCGC
CAATCGCTTCGAGGTGGACGACGACGACGAGGAGGAGGAGGAGGAGGAGG
AGGAGCTGGATGAGGAGGCGGAGCCGGATGATGATGAGCGGGAGGATCGC
CCACTGGGCAGGCGGAATTTGTGAGAGTTAATGCAGAGGGCGGGCCTGTT
GGGTGGCCAGCTGCACCAGATGCGACGTATGTGCGCCCAGCTCTTTAGTG
CGCGCGCTGGCGAGGATTCCTAGACGAAGGTTTTGGTGCCGTTGGCTACA
CACTGTATTCTCTGTATCTGCAACTGCAGCTGCATTTGCATCTGCAACTG
CATCTGCATTCTTCTGTAACTGCATCTGCCTCGGTATTTGTATCTGTATC
TGTGTCTCCGACGAGCTATCGTAGTTTAATTTTTTGCTTTTTTTTTAGTT
TAGTCCAAGTAGTCGATAGTCGATATATCCGGCAGCGTTTCTGTAGCCAT
TATACTTCTTATTATTATTTGTTTTTTTTTTTTTCATTCTGATTGGATTC
TGTTTTTTGATTTCTACGAAAGAGAAGAATACGTACTTTCCCCGAGAAAA
CTAAAATGTGAAATGCCAATGCAATAAAAGTGAAACCAAAAAAAAAAAAA
AAAAAAAAAAAAA

LD27278.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:34:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG32663.a 5538 CG32663.a 1259..5349 1..4091 20440 99.9 Plus
CG32663-RA 4717 CG32663-RA 438..4528 1..4091 20440 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:28:24
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 11714517..11715644 1..1128 5595 99.7 Plus
chrX 22417052 chrX 11725861..11726861 3073..4085 4740 98.3 Plus
chrX 22417052 chrX 11716322..11717254 1430..2362 4665 100 Plus
chrX 22417052 chrX 11717322..11717628 2363..2669 1535 100 Plus
chrX 22417052 chrX 11715955..11716259 1127..1431 1525 100 Plus
chrX 22417052 chrX 11717702..11717954 2669..2921 1265 100 Plus
chrX 22417052 chrX 11718031..11718184 2921..3074 770 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:19:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:28:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11823352..11824479 1..1128 5640 100 Plus
X 23542271 X 11834712..11835730 3073..4091 5080 99.9 Plus
X 23542271 X 11825156..11826088 1430..2362 4665 100 Plus
X 23542271 X 11826156..11826462 2363..2669 1535 100 Plus
X 23542271 X 11824789..11825093 1127..1431 1525 100 Plus
X 23542271 X 11826536..11826788 2669..2921 1265 100 Plus
X 23542271 X 11826865..11827018 2921..3074 770 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:02:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 11831450..11832577 1..1128 5640 100 Plus
X 23527363 X 11842810..11843828 3073..4091 5080 99.9 Plus
X 23527363 X 11833254..11834186 1430..2362 4665 100 Plus
X 23527363 X 11834254..11834560 2363..2669 1535 100 Plus
X 23527363 X 11832887..11833191 1127..1431 1525 100 Plus
X 23527363 X 11834634..11834886 2669..2921 1265 100 Plus
X 23527363 X 11834963..11835116 2921..3074 770 100 Plus
Blast to na_te.dros performed 2019-03-15 19:28:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2320..2426 3115..3218 122 59.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2404..2655 3115..3360 119 52.6 Plus
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 133..172 3990..3951 119 77.5 Minus

LD27278.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:29:17 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 11718031..11718183 2921..3073 100 -> Plus
chrX 11714517..11715643 1..1127 99 -> Plus
chrX 11715956..11716259 1128..1431 100 -> Plus
chrX 11716324..11717254 1432..2362 100 -> Plus
chrX 11717322..11717628 2363..2669 100 -> Plus
chrX 11717703..11717953 2670..2920 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:36:34 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
CG32663-RA 1..3369 256..3624 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:56:22 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
CG32663-RA 1..3369 256..3624 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:57:37 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
rudhira-RB 1..3369 256..3624 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:21:11 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
CG32663-RA 1..3369 256..3624 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:03 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
rudhira-RB 1..3369 256..3624 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:36:33 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
CG32663-RA 329..4415 1..4087 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:56:22 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
CG32663-RA 329..4415 1..4087 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:37 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
rudhira-RB 1189..5275 1..4087 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:21:12 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
CG32663-RA 329..4415 1..4087 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:03 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
rudhira-RB 1189..5275 1..4087 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:17 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
X 11823352..11824478 1..1127 100 -> Plus
X 11824790..11825093 1128..1431 100 -> Plus
X 11825158..11826088 1432..2362 100 -> Plus
X 11826156..11826462 2363..2669 100 -> Plus
X 11826537..11826787 2670..2920 100 -> Plus
X 11826865..11827017 2921..3073 100 -> Plus
X 11834713..11835726 3074..4087 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:17 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
X 11823352..11824478 1..1127 100 -> Plus
X 11824790..11825093 1128..1431 100 -> Plus
X 11825158..11826088 1432..2362 100 -> Plus
X 11826156..11826462 2363..2669 100 -> Plus
X 11826537..11826787 2670..2920 100 -> Plus
X 11826865..11827017 2921..3073 100 -> Plus
X 11834713..11835726 3074..4087 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:17 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
X 11823352..11824478 1..1127 100 -> Plus
X 11824790..11825093 1128..1431 100 -> Plus
X 11825158..11826088 1432..2362 100 -> Plus
X 11826156..11826462 2363..2669 100 -> Plus
X 11826537..11826787 2670..2920 100 -> Plus
X 11826865..11827017 2921..3073 100 -> Plus
X 11834713..11835726 3074..4087 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:37 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11717385..11718511 1..1127 100 -> Plus
arm_X 11718823..11719126 1128..1431 100 -> Plus
arm_X 11719191..11720121 1432..2362 100 -> Plus
arm_X 11720189..11720495 2363..2669 100 -> Plus
arm_X 11720570..11720820 2670..2920 100 -> Plus
arm_X 11720898..11721050 2921..3073 100 -> Plus
arm_X 11728746..11729759 3074..4087 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:55:55 Download gff for LD27278.complete
Subject Subject Range Query Range Percent Splice Strand
X 11831450..11832576 1..1127 100 -> Plus
X 11832888..11833191 1128..1431 100 -> Plus
X 11833256..11834186 1432..2362 100 -> Plus
X 11834254..11834560 2363..2669 100 -> Plus
X 11834635..11834885 2670..2920 100 -> Plus
X 11834963..11835115 2921..3073 100 -> Plus
X 11842811..11843824 3074..4087 99   Plus

LD27278.pep Sequence

Translation from 255 to 3623

> LD27278.pep
MSADSPRRHPSGVVGSGIGLGSGSGTGLGSGSTGGSKSGAAVPAIVPPQT
VSDRSILDSAIGFINDVTLANQPVQDPKDTITWARFETCADVSDPRFGDD
WELEGNAAPPLLLILGYGLGVQVWAIPANGEAVEVLSWRHGVVTALRVLP
TPATAAALDENGRADEPVDSFAEKRPLVAFVDGGSAAASGLLAGSSGLGL
GGGGGGVTTVGGSVGGVSGIGVSASAQFSAVNFMSLKTGVQVKTIKFKNA
VLDIQANRSAVVITFHERIAVFDARTLEDRLTITTCYPSPGINPNPIALG
PRWLAYAEHKLLHSKRSGGGCDGEGVPSYTATVLNAAKSLSKGLREFGEQ
VAAGLTGTTAGSGASSKSSSFDSASGGPDAKQSGVVTIIDVKHPVKDYSP
TSGTPLSSTAGSQGGGDPIVAHFVAHSEALVAMEFDSSGMLLLTADRRGH
DFHVFRVQPHPVGPSLAAVHHLYVLHRGDTSAKVQHIAFSLDSRWAAVST
LRGTTHVFPITPYGGAMGVRTHTSLHVVNKLSRFHRSAGLGADGRSSSPI
SHSESTTFVQSLQPYHNPTLPPYPRPSVVQPLAQLRQPFTLGSPPGSAGL
GGGVGGGGVMGSGVSAGGHGVGVGVGSNSQRQRQRLSSLSDDSGKPLSVC
SIFAKSRSWLLEPPMATREQPHRVQRKAVDSLFVMAGHGALIQYDLDTKL
ASHVAKEKICDDTPIELEVEARAQWNLGRRKDGSQEIAPPLGLDNWLIKD
RHASLLLDSANQFDDPDERTESWLAQVEIITHAGPHRRLWMGPQFVFKNY
NTPSGSNLNHVDAEAVEIGVSKTTTTTLPSTAASSALGLGTIIGKDRSSP
LNMPLSAATSVGGAGIGSSAVTGRSGAGVPVLIESGSYSSIEQSPKLMDR
FRHGHLDSDYGHGDTRLKEDLADAMRESPSTAAARRETTGNYFTTDQLDG
LALNNNNNINNNIIPTKDNASPNPNTNTNPNAIPSSNKVQKAEVTDAVDY
PIRHSYGDHGELSTVVNIEVFDDQLSMSSISTNSRLSLEGPPSQSSPPLS
LTNGLMDTNLMHFSESVTGTGVAQAQVHGRGANRFEVDDDDEEEEEEEEE
LDEEAEPDDDEREDRPLGRRNL*

LD27278.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19493-PA 1107 GF19493-PA 1..1087 1..1093 4117 82.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18446-PA 1110 GG18446-PA 1..1110 1..1122 4526 93.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:57:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24371-PA 1113 GH24371-PA 47..1074 42..1066 3877 80.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
rudhira-PF 1122 CG43154-PF 1..1122 1..1122 5801 100 Plus
rudhira-PD 1122 CG43154-PD 1..1122 1..1122 5801 100 Plus
rudhira-PB 1122 CG32663-PA 1..1122 1..1122 5801 100 Plus
rudhira-PE 2075 CG43154-PE 1..939 1..939 4846 100 Plus
rudhira-PC 2075 CG43154-PC 1..939 1..939 4846 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:57:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15311-PA 1174 GI15311-PA 1..939 1..952 3651 82 Plus
Dmoj\GI15311-PA 1174 GI15311-PA 1072..1134 1005..1066 190 84.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20198-PA 665 GL20198-PA 1..520 1..534 2195 89.1 Plus
Dper\GL20199-PA 527 GL20199-PA 333..527 941..1122 234 53.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26808-PA 1127 GA26808-PA 1..1127 1..1122 4018 80.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13110-PA 1119 GM13110-PA 1..1119 1..1122 5739 97.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14746-PA 1113 GJ14746-PA 1027..1108 1005..1091 212 65.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14849-PA 1166 GK14849-PA 1..1109 1..1066 3888 76.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15668-PA 1111 GE15668-PA 1..1077 1..1085 4418 95.2 Plus

LD27278.hyp Sequence

Translation from 255 to 3623

> LD27278.hyp
MSADSPRRHPSGVVGSGIGLGSGSGTGLGSGSTGGSKSGAAVPAIVPPQT
VSDRSILDSAIGFINDVTLANQPVQDPKDTITWARFETCADVSDPRFGDD
WELEGNAAPPLLLILGYGLGVQVWAIPANGEAVEVLSWRHGVVTALRVLP
TPATAAALDENGRADEPVDSFAEKRPLVAFVDGGSAAASGLLAGSSGLGL
GGGGGGVTTVGGSVGGVSGIGVSASAQFSAVNFMSLKTGVQVKTIKFKNA
VLDIQANRSAVVITFHERIAVFDARTLEDRLTITTCYPSPGINPNPIALG
PRWLAYAEHKLLHSKRSGGGCDGEGVPSYTATVLNAAKSLSKGLREFGEQ
VAAGLTGTTAGSGASSKSSSFDSASGGPDAKQSGVVTIIDVKHPVKDYSP
TSGTPLSSTAGSQGGGDPIVAHFVAHSEALVAMEFDSSGMLLLTADRRGH
DFHVFRVQPHPVGPSLAAVHHLYVLHRGDTSAKVQHIAFSLDSRWAAVST
LRGTTHVFPITPYGGAMGVRTHTSLHVVNKLSRFHRSAGLGADGRSSSPI
SHSESTTFVQSLQPYHNPTLPPYPRPSVVQPLAQLRQPFTLGSPPGSAGL
GGGVGGGGVMGSGVSAGGHGVGVGVGSNSQRQRQRLSSLSDDSGKPLSVC
SIFAKSRSWLLEPPMATREQPHRVQRKAVDSLFVMAGHGALIQYDLDTKL
ASHVAKEKICDDTPIELEVEARAQWNLGRRKDGSQEIAPPLGLDNWLIKD
RHASLLLDSANQFDDPDERTESWLAQVEIITHAGPHRRLWMGPQFVFKNY
NTPSGSNLNHVDAEAVEIGVSKTTTTTLPSTAASSALGLGTIIGKDRSSP
LNMPLSAATSVGGAGIGSSAVTGRSGAGVPVLIESGSYSSIEQSPKLMDR
FRHGHLDSDYGHGDTRLKEDLADAMRESPSTAAARRETTGNYFTTDQLDG
LALNNNNNINNNIIPTKDNASPNPNTNTNPNAIPSSNKVQKAEVTDAVDY
PIRHSYGDHGELSTVVNIEVFDDQLSMSSISTNSRLSLEGPPSQSSPPLS
LTNGLMDTNLMHFSESVTGTGVAQAQVHGRGANRFEVDDDDEEEEEEEEE
LDEEAEPDDDEREDRPLGRRNL*

LD27278.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:25:40
Subject Length Description Subject Range Query Range Score Percent Strand
rudhira-PF 1122 CG43154-PF 1..1122 1..1122 5801 100 Plus
rudhira-PD 1122 CG43154-PD 1..1122 1..1122 5801 100 Plus
rudhira-PB 1122 CG32663-PA 1..1122 1..1122 5801 100 Plus
rudhira-PE 2075 CG43154-PE 1..939 1..939 4846 100 Plus
rudhira-PC 2075 CG43154-PC 1..939 1..939 4846 100 Plus