BDGP Sequence Production Resources |
Search the DGRC for LD27322
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 273 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6005-RA |
Protein status: | LD27322.pep: gold |
Preliminary Size: | 1398 |
Sequenced Size: | 1310 |
Gene | Date | Evidence |
---|---|---|
CG6005 | 2001-01-01 | Release 2 assignment |
CG6005 | 2002-05-31 | Blastp of sequenced clone |
CG6005 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6005 | 2008-04-29 | Release 5.5 accounting |
CG6005 | 2008-08-15 | Release 5.9 accounting |
CG6005 | 2008-12-18 | 5.12 accounting |
1310 bp (1310 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118539
> LD27322.complete TTTCTTCAAACTTTATTGTGAAACTTGTATAAAAATTAATAAGTTATTAA ATAAAGAATCAAACGATGGCACAAGTCGCTTTTCTGGACAACCTGCTTAG GGAGTACCTAGTTTTTCGAGGTTTCTCCAGCACCTTGAAGGCCCTCGACT TGGAGCAGCGCACTGAGAAGGACCAGCACTTCCGTGCGGAACGAATTCTG GAGCAATTCAATAATGCTGTGCAAGCGTCTGACCTTCAGGCTCTCAGGAG TTTGTGGTTTCACCTGGACAACAACATATTTTCCAAGCTGGAGCATACGT ATGCCGTTGCTGTCAAGAAACTGGAAAACAGCCTCCTAAAATACTACCTG GTGACCGCCTACAGCAGCAATCGACCTGAGAAGGTGTCCGAGTTCTTTAA CAAGTTGGCGGGCGATCTGCAGCAGCAAAGCGAGTGGAAGGATTGGTTCT ACTTTCCGTTTTGCAAGAATGCCGAGGAGTCGCCCACTTTTGCCCTGTTC TTCACCAAGCAATGGCAGGATACGTTGCTTCTGTCGCTGCGCAACTTCCT GACCACCGTATACCAGTGCCTGCCGCAGCCCACATTCGTGCGGGCGGAGC AGGAAGCGGCCCACATGCAGCGTCTCAGCGAAGACAACGCTGGGCTACGC ACTCGGGTACTCAACTTGCAGCAGGAGCTGAACCAGATGACCCAGCAACA ATCAGGAACTGCGGCCGCAAGCGGAAGTTCACTTGGCGGTGGGGTCGACA ATGGAGCCCGCAGACGCAGCGTGTATCGCCAGCAGCAGAGCCTGAGCGAC ATTCTGCCTTTCGACATCAGTCCTCCCGGACACATAGTCGATGATTTCTG CATCATTGCTTCCGAGGCGAACAGCGTGAGCCAGGCCAGCGACGCACAGG CGCGCAGCCTTAAGCAGTTAATCCGTAATATTGGATCGGGCAGCTCGCCT GTGATGGGGCGCAAGGACCAGACAGCCAGTTCTCTGGGAGAAAAGTCCAC CAAACGCAGGTCTGGCAGTCTGGGACGCAGTTGGATTTAGGAACCCACGT ATGTAACTAAACAAACCCAAAAGTATTTTCCAAAAGGTAATCGCAAGTGT GTATTAGAAAGTTGATAGCTTCGAGATCAAAATTTAGTCCTTTAGTTTTA AAATTAGTTAATTCGTAGGCATTCCATATATTATACATTTTTGTCTACCC CTTTAAAACCGAATCATAAACGCTAAATACCCAAATATTTAATATTCATA AATATAGATAATATACACTAAAAATAAATGTCAAAGAAATTTAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6005-RA | 1479 | CG6005-RA | 45..1343 | 1..1299 | 6480 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 14846584..14847425 | 1292..451 | 4180 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 14847684..14847992 | 309..1 | 1545 | 100 | Minus |
chr3R | 27901430 | chr3R | 14847487..14847628 | 450..309 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19022594..19023442 | 1299..451 | 4230 | 99.9 | Minus |
3R | 32079331 | 3R | 19023701..19024009 | 309..1 | 1545 | 100 | Minus |
3R | 32079331 | 3R | 19023504..19023645 | 450..309 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 18763425..18764273 | 1299..451 | 4230 | 99.8 | Minus |
3R | 31820162 | 3R | 18764532..18764840 | 309..1 | 1545 | 100 | Minus |
3R | 31820162 | 3R | 18764335..18764476 | 450..309 | 710 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14846584..14847425 | 451..1292 | 99 | <- | Minus |
chr3R | 14847487..14847627 | 310..450 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 1..975 | 66..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 1..975 | 66..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 1..975 | 66..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 1..975 | 66..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 1..975 | 66..1040 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 14..1305 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 14..1305 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 14..1305 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 14..1305 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6005-RA | 22..1313 | 1..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19022601..19023442 | 451..1292 | 100 | <- | Minus |
3R | 19023504..19023644 | 310..450 | 100 | <- | Minus |
3R | 19023701..19024009 | 1..309 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19022601..19023442 | 451..1292 | 100 | <- | Minus |
3R | 19023504..19023644 | 310..450 | 100 | <- | Minus |
3R | 19023701..19024009 | 1..309 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19022601..19023442 | 451..1292 | 100 | <- | Minus |
3R | 19023504..19023644 | 310..450 | 100 | <- | Minus |
3R | 19023701..19024009 | 1..309 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14848323..14849164 | 451..1292 | 100 | <- | Minus |
arm_3R | 14849226..14849366 | 310..450 | 100 | <- | Minus |
arm_3R | 14849423..14849731 | 1..309 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18763432..18764273 | 451..1292 | 100 | <- | Minus |
3R | 18764335..18764475 | 310..450 | 100 | <- | Minus |
3R | 18764532..18764840 | 1..309 | 100 | Minus |
Translation from 65 to 1039
> LD27322.pep MAQVAFLDNLLREYLVFRGFSSTLKALDLEQRTEKDQHFRAERILEQFNN AVQASDLQALRSLWFHLDNNIFSKLEHTYAVAVKKLENSLLKYYLVTAYS SNRPEKVSEFFNKLAGDLQQQSEWKDWFYFPFCKNAEESPTFALFFTKQW QDTLLLSLRNFLTTVYQCLPQPTFVRAEQEAAHMQRLSEDNAGLRTRVLN LQQELNQMTQQQSGTAAASGSSLGGGVDNGARRRSVYRQQQSLSDILPFD ISPPGHIVDDFCIIASEANSVSQASDAQARSLKQLIRNIGSGSSPVMGRK DQTASSLGEKSTKRRSGSLGRSWI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23007-PA | 328 | GF23007-PA | 29..328 | 23..324 | 1429 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16229-PA | 326 | GG16229-PA | 1..326 | 1..324 | 1680 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22513-PA | 315 | GH22513-PA | 1..315 | 1..324 | 1120 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6005-PB | 324 | CG6005-PB | 1..324 | 1..324 | 1653 | 100 | Plus |
CG6005-PA | 324 | CG6005-PA | 1..324 | 1..324 | 1653 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22224-PA | 319 | GI22224-PA | 1..319 | 1..324 | 1227 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24103-PA | 320 | GL24103-PA | 1..320 | 1..324 | 1378 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19288-PA | 320 | GA19288-PA | 1..320 | 1..324 | 1384 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23370-PA | 320 | GM23370-PA | 1..320 | 1..324 | 1678 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20139-PA | 320 | GD20139-PA | 1..320 | 1..324 | 1666 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24346-PA | 316 | GJ24346-PA | 1..316 | 1..324 | 1249 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12064-PA | 324 | GK12064-PA | 1..324 | 1..324 | 1349 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25157-PA | 326 | GE25157-PA | 1..326 | 1..324 | 1571 | 93.9 | Plus |
Translation from 65 to 1039
> LD27322.hyp MAQVAFLDNLLREYLVFRGFSSTLKALDLEQRTEKDQHFRAERILEQFNN AVQASDLQALRSLWFHLDNNIFSKLEHTYAVAVKKLENSLLKYYLVTAYS SNRPEKVSEFFNKLAGDLQQQSEWKDWFYFPFCKNAEESPTFALFFTKQW QDTLLLSLRNFLTTVYQCLPQPTFVRAEQEAAHMQRLSEDNAGLRTRVLN LQQELNQMTQQQSGTAAASGSSLGGGVDNGARRRSVYRQQQSLSDILPFD ISPPGHIVDDFCIIASEANSVSQASDAQARSLKQLIRNIGSGSSPVMGRK DQTASSLGEKSTKRRSGSLGRSWI*