BDGP Sequence Production Resources |
Search the DGRC for LD27336
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 273 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4364-RA |
Protein status: | LD27336.pep: gold |
Preliminary Size: | 2053 |
Sequenced Size: | 2141 |
Gene | Date | Evidence |
---|---|---|
CG4364 | 2001-01-01 | Release 2 assignment |
CG4364 | 2001-11-29 | Blastp of sequenced clone |
CG4364 | 2008-04-29 | Release 5.5 accounting |
CG4364 | 2008-08-15 | Release 5.9 accounting |
CG4364 | 2008-12-18 | 5.12 accounting |
2141 bp (2141 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069545
> LD27336.complete TCACACTTCCTTTCCACGCGAAACCAACAACACAAAAAACGTGTGTTTTG GTCAACAGCGTGTTTTCTTTAAAATAAATCTGTATAGAACAGATTTAACT TGACAAGAAGTGCATTTTCATAAACCGGCACAATGAGACGACCCAAGAAG TACGAGTCCGGTGAGGCTACGCAGTACATTAGTCGCCGGGCTGCGCTCAG GAAACTCCAGCTCTCGCTGAACGATTTCCGGAGGCTGTGCATCCTGAAGG GCGTCTATCCCCGGGAACCGAAACATAGGCGTAGAGCTCAAAAGGGATCT TCGGAGATCAAGGTGCTTTATCACACCAAGGACATTCGCTTTCTGCTGCA TGAGTCGATTGTGTGGACGCTGCGTGACTACAAGATCTTTGCCAAGAAGA GCAATCGCGATCGTGCCATCAAGGATTTCCGCAACCTGAAGCGTCGATTG GCCCTGTTTCCCGAAATCAAACTCGATCACATTGTCAAAGAGCGCTATCC TACCTTCATCGATGCCCTCAAGGATCTGGATGATTGTCTGACGCTGCTCT TTCTGTTCAGCACCTTTCCCTCGCTGCACTTGATTCCCAGGGAGCAGTCG AATCTGTGCCGCCGTCTGACTATTGAGTTCCTACACTACGTGATCGCGTC AAAGTCGCTGCGCAAGGTGTTCATCTCCATCAAAGGCTACTACTTCCAAG CGGAGATCAAGGGCCAGAAGGTCACTTGGATTGTGCCGCATTACTATCCG TTCAAGCCACAGTCACGCCAGGAGGTGGACTTCAAGGTGATGTCCATCTT TGTGGAGTTCTACACCATTATGCTGGGCTTCACCAACTTCCGGCTATTCC ATGGCCTGAATCTGGCCTATCCACCACAATTCCCAAGCAGCGTGCTTCAG GACAGCGAAGAGTCCCTGAAGGATGAGGCCAGCTTCGTATCTGACCGCAT TGCAGCCTTGAACTTCGAGCTACTGCGCACGGACAAGGTGCAGGAGGATG AGGAGGAGCTGGACATTGACATGGAACTTTTGGAGCAGGACGGCGACTCG AAGCGCATCATCAAAATGAAGCAGGAGGCGCAGGAAGTGAGCCGTCTACG CACCCTATTCAAGGGCTTGAAGTTCTTTATCAATCGCGAAGTTCCGCGCG AGCCCCTAGTCATCCTCATCCGTTCCTTTGGCGGCAAGGTGTCCTGGGAC TCGTCTATCTTCGCTGGCTCAACCTATGACGAAGGTGATGAGACCATCAC CCACCAGATCGTGGACAGGCCCAGCATTACCACGCAATACATCTCGCGCG ACTATATCCAGCCACAGTGGGTCTTCGACTGCGTCAATCAGCGCCAGCTG CTGCCCACTAACAAGTACTTCATCGGCGAGACACTGCCACCGCACCTGTC GCCATTCGTGGACTCCAAGAGGGACTCGTACATACCGCCGGAAGAGAAGG CCCTCCTGGATCCCTCCCTGATCGAAACACATGCCCAAAGCGATGACGAC TCCGAGGACGAAGCTCAGGAGGAAGAGGAGACTGTGGACCAAGAGCTGCT CGATGCGCAACTGCAGCTGGCCTATCAACAGGAAACGGCTGAGTACAAGA AGTACGGCGGTCCCGATGGCGTCAACGAAGACGAGGAGGATCCGGATGAT GAAGATGATAATGAAGACGACGATGAAGAGGAGGAAGAGCTCGACGAGAA GACCAAGCGTCTGCAGGAGGAGAAACAGAAGATGTCCGTGCAGTCGGGCA AGGTGCACAAGGTCAACAAGCGGCAGGTGCACAAGGCCGAGGTCGATGAG CACCGCCTGCAAGCGCGTATGGTGAAGCCCCGTCATCGCAATCTGTTCCG GAAACTCATCCGCGAGAAGCAGACTAAGGAAAAGGAGGAATGGCTGTTGC GCAAGAAGCGACGAACCATCGAGGCCAACGAGAAGGAGGCCCGGAAGACG GCCAAGCGGGAGGCACGCAAGGAAGCGGCGGCTGCAGCTGCCAAGGCTTC CAAGCTGGGCAAGTGAGCGAAGAGTCTGCTCGGGGGGATCTGTGTCTTGA TTTAGGTTTAAATAATAAACAACGAAAATGTAAATGAAACTGAATGGAAT ATAATTTTATTTCGTATTCGAGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4364-RA | 2275 | CG4364-RA | 83..2205 | 1..2123 | 10615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9708447..9709547 | 1483..383 | 5325 | 98.9 | Minus |
chr2L | 23010047 | chr2L | 9707746..9708385 | 2122..1483 | 3080 | 98.8 | Minus |
chr2L | 23010047 | chr2L | 9709607..9709842 | 384..149 | 1090 | 97.5 | Minus |
chr2L | 23010047 | chr2L | 9709945..9710094 | 150..1 | 720 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9709622..9710722 | 1483..383 | 5505 | 100 | Minus |
2L | 23513712 | 2L | 9708920..9709560 | 2123..1483 | 3205 | 100 | Minus |
2L | 23513712 | 2L | 9710782..9711017 | 384..149 | 1180 | 100 | Minus |
2L | 23513712 | 2L | 9711120..9711269 | 150..1 | 750 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9709622..9710722 | 1483..383 | 5505 | 100 | Minus |
2L | 23513712 | 2L | 9708920..9709560 | 2123..1483 | 3205 | 100 | Minus |
2L | 23513712 | 2L | 9710782..9711017 | 384..149 | 1180 | 100 | Minus |
2L | 23513712 | 2L | 9711120..9711269 | 150..1 | 750 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rooA | 7621 | rooA ROOA_LTR 7621bp | 6969..7020 | 1911..1962 | 116 | 69.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9709945..9710094 | 1..150 | 98 | Minus | |
chr2L | 9707746..9708384 | 1484..2122 | 98 | <- | Minus |
chr2L | 9708447..9709545 | 385..1483 | 98 | <- | Minus |
chr2L | 9709607..9709840 | 151..384 | 97 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 1..1884 | 133..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 1..1884 | 133..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 1..1884 | 133..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 1..1884 | 133..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 1..1884 | 133..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 1..2122 | 1..2122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 1..2122 | 1..2122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 3..2124 | 1..2122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 1..2122 | 1..2122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4364-RA | 3..2124 | 1..2122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9708921..9709559 | 1484..2122 | 100 | <- | Minus |
2L | 9709622..9710720 | 385..1483 | 100 | <- | Minus |
2L | 9710782..9711015 | 151..384 | 100 | <- | Minus |
2L | 9711120..9711269 | 1..150 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9708921..9709559 | 1484..2122 | 100 | <- | Minus |
2L | 9709622..9710720 | 385..1483 | 100 | <- | Minus |
2L | 9710782..9711015 | 151..384 | 100 | <- | Minus |
2L | 9711120..9711269 | 1..150 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9708921..9709559 | 1484..2122 | 100 | <- | Minus |
2L | 9709622..9710720 | 385..1483 | 100 | <- | Minus |
2L | 9710782..9711015 | 151..384 | 100 | <- | Minus |
2L | 9711120..9711269 | 1..150 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9708921..9709559 | 1484..2122 | 100 | <- | Minus |
arm_2L | 9709622..9710720 | 385..1483 | 100 | <- | Minus |
arm_2L | 9710782..9711015 | 151..384 | 100 | <- | Minus |
arm_2L | 9711120..9711269 | 1..150 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9708921..9709559 | 1484..2122 | 100 | <- | Minus |
2L | 9709622..9710720 | 385..1483 | 100 | <- | Minus |
2L | 9710782..9711015 | 151..384 | 100 | <- | Minus |
2L | 9711120..9711269 | 1..150 | 100 | Minus |
Translation from 132 to 2015
> LD27336.hyp MRRPKKYESGEATQYISRRAALRKLQLSLNDFRRLCILKGVYPREPKHRR RAQKGSSEIKVLYHTKDIRFLLHESIVWTLRDYKIFAKKSNRDRAIKDFR NLKRRLALFPEIKLDHIVKERYPTFIDALKDLDDCLTLLFLFSTFPSLHL IPREQSNLCRRLTIEFLHYVIASKSLRKVFISIKGYYFQAEIKGQKVTWI VPHYYPFKPQSRQEVDFKVMSIFVEFYTIMLGFTNFRLFHGLNLAYPPQF PSSVLQDSEESLKDEASFVSDRIAALNFELLRTDKVQEDEEELDIDMELL EQDGDSKRIIKMKQEAQEVSRLRTLFKGLKFFINREVPREPLVILIRSFG GKVSWDSSIFAGSTYDEGDETITHQIVDRPSITTQYISRDYIQPQWVFDC VNQRQLLPTNKYFIGETLPPHLSPFVDSKRDSYIPPEEKALLDPSLIETH AQSDDDSEDEAQEEEETVDQELLDAQLQLAYQQETAEYKKYGGPDGVNED EEDPDDEDDNEDDDEEEEELDEKTKRLQEEKQKMSVQSGKVHKVNKRQVH KAEVDEHRLQARMVKPRHRNLFRKLIREKQTKEKEEWLLRKKRRTIEANE KEARKTAKREARKEAAAAAAKASKLGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4364-PA | 627 | CG4364-PA | 1..627 | 1..627 | 3231 | 100 | Plus |
Translation from 132 to 2015
> LD27336.pep MRRPKKYESGEATQYISRRAALRKLQLSLNDFRRLCILKGVYPREPKHRR RAQKGSSEIKVLYHTKDIRFLLHESIVWTLRDYKIFAKKSNRDRAIKDFR NLKRRLALFPEIKLDHIVKERYPTFIDALKDLDDCLTLLFLFSTFPSLHL IPREQSNLCRRLTIEFLHYVIASKSLRKVFISIKGYYFQAEIKGQKVTWI VPHYYPFKPQSRQEVDFKVMSIFVEFYTIMLGFTNFRLFHGLNLAYPPQF PSSVLQDSEESLKDEASFVSDRIAALNFELLRTDKVQEDEEELDIDMELL EQDGDSKRIIKMKQEAQEVSRLRTLFKGLKFFINREVPREPLVILIRSFG GKVSWDSSIFAGSTYDEGDETITHQIVDRPSITTQYISRDYIQPQWVFDC VNQRQLLPTNKYFIGETLPPHLSPFVDSKRDSYIPPEEKALLDPSLIETH AQSDDDSEDEAQEEEETVDQELLDAQLQLAYQQETAEYKKYGGPDGVNED EEDPDDEDDNEDDDEEEEELDEKTKRLQEEKQKMSVQSGKVHKVNKRQVH KAEVDEHRLQARMVKPRHRNLFRKLIREKQTKEKEEWLLRKKRRTIEANE KEARKTAKREARKEAAAAAAKASKLGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21889-PA | 627 | GF21889-PA | 1..627 | 1..627 | 2889 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24014-PA | 629 | GG24014-PA | 1..629 | 1..627 | 3247 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25074-PA | 635 | GH25074-PA | 1..633 | 1..626 | 2764 | 88.5 | Plus |
Dgri\GH23436-PA | 201 | GH23436-PA | 1..179 | 435..606 | 515 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4364-PA | 627 | CG4364-PA | 1..627 | 1..627 | 3231 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18209-PA | 631 | GI18209-PA | 1..629 | 1..626 | 2886 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19215-PA | 631 | GL19215-PA | 1..613 | 1..609 | 2779 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18135-PA | 631 | GA18135-PA | 1..613 | 1..609 | 2779 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12330-PA | 627 | GM12330-PA | 1..627 | 1..627 | 3287 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22342-PA | 627 | GD22342-PA | 1..627 | 1..627 | 3304 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14807-PA | 633 | GJ14807-PA | 1..610 | 1..605 | 2779 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25349-PA | 634 | GK25349-PA | 1..610 | 1..602 | 2757 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10391-PA | 628 | GE10391-PA | 1..628 | 1..627 | 3246 | 97.8 | Plus |