BDGP Sequence Production Resources |
Search the DGRC for LD27370
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 273 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | CG45071-RA |
Protein status: | LD27370.pep: gold |
Preliminary Size: | 1817 |
Sequenced Size: | 1596 |
Gene | Date | Evidence |
---|---|---|
CG6854 | 2001-11-29 | Blastp of sequenced clone |
CG6854 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6854 | 2008-04-29 | Release 5.5 accounting |
CG6854 | 2008-08-15 | Release 5.9 accounting |
CG6854 | 2008-12-18 | 5.12 accounting |
1596 bp (1596 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069546
> LD27370.complete ATTAAATAAAGTGTGCCCGCAAAATAGAGACAAAAGTGCGAAATAAAATA TATAAAACTCACTCAATCACTTTGAGAGCGCTAAGATGGCGCCAAAAAAG TCCACCATTGTGCTCAATGTGGAGCAGTTTATTCACGACATCGAGGAGCG CCCGGCCATCTGGAACCGCAATTTCCACTGCAACAAGGCCTTCCTCGAGC AGATGTGGGACGAGCTGAGCGGAGCGCACAAACTGCCAAAGATCGTTCTC AAGGCCAAATGGAAGGGACTTCGAGACAATTTCCGTGTGGAGTACAAAAG GATACCGCGGGCGGATAACGGTGATTTTATGGTGGATCCGGCCACCTTTG AGTCCAAGTGGCTGCACTACTATGCATTGTTGTTTTTAACTGATCACATG CGTCATCGTTTGCCAAAGAACGAACAGGATCAGTCATTTTACTTCAGCCA GCAAAGCGAGGACTGTGAAAAGACAGTGGTGGAGCCGGATTTAACAAACG GTCTAATACGTCGTCTGCAGGACAGCGACGAGGATTACGACGAGGAGGAA ATGGAGGCGGACGGAGAGGCTAGCGAAGCCACCATGGAGGAAACGATGCC CACGCCACCGGCTGCGCATCAAATGAATCAAGTTAGCACCACACCACTGG CCACCGGAGCTTTGCGAGCCCAAGAAGAGGCACATCAGCACGCTTTAATT AAGGCAGGATTACTCCGCGCTCAGTTGATGGAGCTGGAAAAGGAGGCGGA GGACTTGAGCAGAAAGCCACCTCCGCCACAGCAAATGACATCTCCAGTGG CACCCTCACTACAAGTGCTAGTGGAACCACCAGCCGCACACTGTTCTCCA CCGCCAATGGTGACCACCACATCCGCACAAGTACAACAACCGGGCTCAGC AGCTGTTCTGGCGCCGGCAACGACCACATCCGCGTCATCTGTATCCTCGA ATGGAGCGCCAATGGGCGGCAAGAGATCTGTGTCGCCACCGCCTCTATAC AACAAAGCACACCATCCGCTGGCCACTCTGGCAGCAGCACATCTTGCGGC CAAAGACCGAAATGAGGATTTCGGACCCACCTCTGCTGTAGGAGGAAACG GAGATCACCTGAGCTTCACTCAACACTCCTACGCCAATGGACTGATACCC GCCCTTAAGCTGAAGCGCCCGCGTCTCTCCGAGGATAGCAATTTTAATGG TTCCTCGACAATGGACACTCCGCTCGTACCAGAGGACGATGACTACCACT ACTTGCTCAGCCTACATCCGTACATGAAGCAGCTGACCGCAGCCCAGAAG CTGCGCATACGCACCAAGATACAAAAGCTCATCTTCAAGGAACTCTACAA AGAAGATCTTGAGGAGTCCAAGTAGTGGAACAGCTCAGAATGCCTAGATT AAGCTCAAGACTGTACATACGCCCACTAGCCTAGATCGTAAGCATTATAC TTAGTTCGTGTCCATGCCATGCTATTTGATTGATTTCTAGTTGAGCGCCA CTCCAAGGAAAGCTGGGAGTGCGCCATTTACGCCTAAGCACAAATACCCT GGAAATAAAAATGTAACATTAAAATGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6854.c | 1756 | CG6854.c | 174..1750 | 1..1577 | 7885 | 100 | Plus |
CG6854-RA | 1872 | CG6854-RA | 290..1866 | 1..1577 | 7885 | 100 | Plus |
CG6854.a | 1722 | CG6854.a | 527..1716 | 388..1577 | 5950 | 100 | Plus |
CG6854.a | 1722 | CG6854.a | 290..528 | 1..239 | 1195 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15099620..15100813 | 383..1576 | 5835 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 15098811..15099046 | 4..239 | 1180 | 100 | Plus |
chr3L | 24539361 | chr3L | 15099417..15099574 | 236..393 | 760 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15109537..15110731 | 383..1577 | 5960 | 99.9 | Plus |
3L | 28110227 | 3L | 15108720..15108958 | 1..239 | 1195 | 100 | Plus |
3L | 28110227 | 3L | 15109334..15109491 | 236..393 | 760 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15102637..15103831 | 383..1577 | 5960 | 99.9 | Plus |
3L | 28103327 | 3L | 15101820..15102058 | 1..239 | 1195 | 100 | Plus |
3L | 28103327 | 3L | 15102434..15102591 | 236..393 | 760 | 98.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15098806..15099046 | 1..239 | 99 | -> | Plus |
chr3L | 15099421..15099570 | 240..389 | 100 | -> | Plus |
chr3L | 15099627..15100813 | 390..1576 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RA | 1..1290 | 86..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RA | 1..1290 | 86..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RA | 1..1290 | 86..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RA | 1..1290 | 86..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG45071-RA | 1..1290 | 86..1375 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RA | 290..1865 | 1..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RA | 290..1865 | 1..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RA | 292..1867 | 1..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RA | 290..1865 | 1..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG45071-RA | 292..1867 | 1..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15108720..15108958 | 1..239 | 100 | -> | Plus |
3L | 15109338..15109487 | 240..389 | 100 | -> | Plus |
3L | 15109544..15110730 | 390..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15108720..15108958 | 1..239 | 100 | -> | Plus |
3L | 15109338..15109487 | 240..389 | 100 | -> | Plus |
3L | 15109544..15110730 | 390..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15108720..15108958 | 1..239 | 100 | -> | Plus |
3L | 15109338..15109487 | 240..389 | 100 | -> | Plus |
3L | 15109544..15110730 | 390..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15101820..15102058 | 1..239 | 100 | -> | Plus |
arm_3L | 15102438..15102587 | 240..389 | 100 | -> | Plus |
arm_3L | 15102644..15103830 | 390..1576 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15101820..15102058 | 1..239 | 100 | -> | Plus |
3L | 15102438..15102587 | 240..389 | 100 | -> | Plus |
3L | 15102644..15103830 | 390..1576 | 100 | Plus |
Translation from 85 to 1374
> LD27370.pep MAPKKSTIVLNVEQFIHDIEERPAIWNRNFHCNKAFLEQMWDELSGAHKL PKIVLKAKWKGLRDNFRVEYKRIPRADNGDFMVDPATFESKWLHYYALLF LTDHMRHRLPKNEQDQSFYFSQQSEDCEKTVVEPDLTNGLIRRLQDSDED YDEEEMEADGEASEATMEETMPTPPAAHQMNQVSTTPLATGALRAQEEAH QHALIKAGLLRAQLMELEKEAEDLSRKPPPPQQMTSPVAPSLQVLVEPPA AHCSPPPMVTTTSAQVQQPGSAAVLAPATTTSASSVSSNGAPMGGKRSVS PPPLYNKAHHPLATLAAAHLAAKDRNEDFGPTSAVGGNGDHLSFTQHSYA NGLIPALKLKRPRLSEDSNFNGSSTMDTPLVPEDDDYHYLLSLHPYMKQL TAAQKLRIRTKIQKLIFKELYKEDLEESK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23684-PA | 1010 | GF23684-PA | 1..425 | 1..429 | 1885 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15717-PA | 430 | GG15717-PA | 1..430 | 1..429 | 2251 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14829-PA | 678 | GH14829-PA | 1..103 | 1..103 | 569 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG45071-PA | 429 | CG45071-PA | 1..429 | 1..429 | 2248 | 100 | Plus |
CG45071-PB | 379 | CG45071-PB | 1..379 | 1..429 | 1822 | 85.1 | Plus |
CTPsyn-PB | 623 | CG45070-PB | 1..54 | 1..54 | 281 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13933-PA | 689 | GI13933-PA | 1..103 | 1..103 | 564 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24720-PA | 928 | GL24720-PA | 1..334 | 1..334 | 1401 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23623-PA | 690 | GA23623-PA | 1..103 | 1..103 | 576 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25504-PA | 429 | GM25504-PA | 1..429 | 1..429 | 2282 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14523-PA | 1013 | GD14523-PA | 1..428 | 1..428 | 2269 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13723-PA | 665 | GJ13723-PA | 1..103 | 1..103 | 572 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17769-PA | 738 | GK17769-PA | 56..149 | 52..145 | 503 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22048-PA | 429 | GE22048-PA | 1..429 | 1..429 | 2262 | 97.9 | Plus |
Translation from 85 to 1374
> LD27370.hyp MAPKKSTIVLNVEQFIHDIEERPAIWNRNFHCNKAFLEQMWDELSGAHKL PKIVLKAKWKGLRDNFRVEYKRIPRADNGDFMVDPATFESKWLHYYALLF LTDHMRHRLPKNEQDQSFYFSQQSEDCEKTVVEPDLTNGLIRRLQDSDED YDEEEMEADGEASEATMEETMPTPPAAHQMNQVSTTPLATGALRAQEEAH QHALIKAGLLRAQLMELEKEAEDLSRKPPPPQQMTSPVAPSLQVLVEPPA AHCSPPPMVTTTSAQVQQPGSAAVLAPATTTSASSVSSNGAPMGGKRSVS PPPLYNKAHHPLATLAAAHLAAKDRNEDFGPTSAVGGNGDHLSFTQHSYA NGLIPALKLKRPRLSEDSNFNGSSTMDTPLVPEDDDYHYLLSLHPYMKQL TAAQKLRIRTKIQKLIFKELYKEDLEESK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG45071-PA | 429 | CG45071-PA | 1..429 | 1..429 | 2248 | 100 | Plus |
CG45071-PB | 379 | CG45071-PB | 1..379 | 1..429 | 1822 | 85.1 | Plus |
CTPsyn-PB | 623 | CG45070-PB | 1..54 | 1..54 | 281 | 96.3 | Plus |