BDGP Sequence Production Resources |
Search the DGRC for LD27389
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 273 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | Aats-phe-RA |
Protein status: | LD27389.pep: gold |
Preliminary Size: | 1550 |
Sequenced Size: | 1505 |
Gene | Date | Evidence |
---|---|---|
CG13348 | 2001-01-01 | Release 2 assignment |
CG13348 | 2001-09-19 | Blastp of sequenced clone |
CG13348 | 2003-01-01 | Sim4 clustering to Release 3 |
Aats-phe | 2008-04-29 | Release 5.5 accounting |
Aats-phe | 2008-08-15 | Release 5.9 accounting |
Aats-phe | 2008-12-18 | 5.12 accounting |
1505 bp (1505 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058580
> LD27389.complete CTTCCAAGTTATAACAAAAAATGCAATAAATAGTTGCATCGAATCAATAA AGTCCCTCCAATATGCTTCTGACGCTTCGAGTGCAGGGAGCACGGCACTG GTTGAAGTCCACCCGCTGCCTGGCCAGCAGTGCGGCGCCCGCGAAGTCGC CGTCATCGCCACCGCAGCTGGAGGTCAGTGGAAGCACGTACGCCACCGAC GGATGGACGAACGTAACGCCCAAGATACTCTCCTACGTGGGGGCCAACAA GCACCTGCAGACGGACCACCCGCTTTCCATCATCCGCCAGAGGATCGTAA ACTACTTTTATGGAGCGTATCGCAACCAAAGGGGCAATCCACTATTCTCC GTCTATGATCAAATGAATCCGGTGGTTACTGTGCAGCAGAACTTTGACAA TCTGCTAATTCCCGCCGATCATGTGAGTCGACAGAAATCCGATTGCTATT ACATCAATCAGCAGCATCTGCTGCGCGCCCACACCACCGCCCATCAGGTG GAATTGATCTCGGGCGGGCTGGACAACTTTCTGGTCGTGGGCGAGGTGTA TCGACGGGACGAAATCGATAGCACCCACTATCCGGTATTCCACCAGGCGG ACGCTGTGCGGCTGGTCACCAAAGACAAGCTTTTCGAGCGCAATCCTGGC CTGGAACTCTTTGAAGAGACGTGGTCGGGTACGCTGGCCGACCCCAAGCT GATTCTGCCCTCATCCAAGTTCATGGACCAAACCAAACAGCCCTGCCACA CGCTCGAGGCCGTCAAGTTGATGGAGCACGAGATGAAGCACGTGCTGGTT GGCCTGACCAAGGATCTGTTTGGGCCGCGCATCAAGTACAGATGGGTGGA CACCTATTTTCCCTTCACCCAGCCCTCCTGGGAGCTGGAGATCTATTTCA AGGACAACTGGCTGGAGGTCTTAGGCTGCGGCATCATGCGCCACGAAATC CTGCAGAGATCGGGCGTTCATCAATCGATTGGCTACGCCTTTGGCGTCGG CCTGGAGCGACTGGCCATGGTGCTGTTCGATATACCTGACATCCGGCTCT TCTGGTCGAACGACAGTGGCTTTCTGTCGCAGTTTAGCGAAAAGGATCTG CACAATCTGCCCAAGTACAAGCCCATCTCCCACTATCCGCAGTGCACGAA TGACTTGTCGTTCTGGCTGCCCCAGGACATTGAGGTGGATGCCGGCTTCT CGCCGAACGACTTTTACGATCTAGTCCGCTCTGTAGCTGGTGATATGGTG GAGCAGATCAGTCTGGTGGACAAGTTTAAGCACCCGAAAACGGGGAAATC GAGCGTGTGCTTCCGCATTGTTTATCGCCATATGGAGCGCACCTTAACCC AGGCGGAGGTCAACGAAATCCACAAGCAGATCGCTAGTGCGAGCGTGGAT AGTTTCAATGTGCAAATACGTTAGTCATAGTCTAGTTCCGTTTCAATTCA AAACCAAAAAAGAAAAACACCAGTAAAGATAGCCAACAAAAAAAAAAAAA AAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9855673..9856928 | 1..1256 | 99 | -> | Plus |
chr2R | 9856998..9857228 | 1257..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 1..1362 | 63..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 1..1362 | 63..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 1..1362 | 63..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 1..1362 | 63..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 1..1362 | 63..1424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 1..1487 | 1..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 1..1487 | 1..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 40..1526 | 1..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 1..1487 | 1..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aats-phe-RA | 40..1526 | 1..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13968347..13969602 | 1..1256 | 100 | -> | Plus |
2R | 13969672..13969902 | 1257..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13968347..13969602 | 1..1256 | 100 | -> | Plus |
2R | 13969672..13969902 | 1257..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13968347..13969602 | 1..1256 | 100 | -> | Plus |
2R | 13969672..13969902 | 1257..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9855852..9857107 | 1..1256 | 100 | -> | Plus |
arm_2R | 9857177..9857407 | 1257..1487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13969546..13970801 | 1..1256 | 100 | -> | Plus |
2R | 13970871..13971101 | 1257..1487 | 100 | Plus |
Translation from 62 to 1423
> LD27389.pep MLLTLRVQGARHWLKSTRCLASSAAPAKSPSSPPQLEVSGSTYATDGWTN VTPKILSYVGANKHLQTDHPLSIIRQRIVNYFYGAYRNQRGNPLFSVYDQ MNPVVTVQQNFDNLLIPADHVSRQKSDCYYINQQHLLRAHTTAHQVELIS GGLDNFLVVGEVYRRDEIDSTHYPVFHQADAVRLVTKDKLFERNPGLELF EETWSGTLADPKLILPSSKFMDQTKQPCHTLEAVKLMEHEMKHVLVGLTK DLFGPRIKYRWVDTYFPFTQPSWELEIYFKDNWLEVLGCGIMRHEILQRS GVHQSIGYAFGVGLERLAMVLFDIPDIRLFWSNDSGFLSQFSEKDLHNLP KYKPISHYPQCTNDLSFWLPQDIEVDAGFSPNDFYDLVRSVAGDMVEQIS LVDKFKHPKTGKSSVCFRIVYRHMERTLTQAEVNEIHKQIASASVDSFNV QIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13723-PA | 462 | GF13723-PA | 1..462 | 1..453 | 2282 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20415-PA | 453 | GG20415-PA | 1..453 | 1..453 | 2409 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22827-PA | 456 | GH22827-PA | 1..456 | 1..453 | 2187 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PheRS-m-PA | 453 | CG13348-PA | 1..453 | 1..453 | 2410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21206-PA | 459 | GI21206-PA | 1..459 | 1..453 | 2141 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20031-PA | 459 | GL20031-PA | 1..459 | 1..453 | 2243 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12223-PA | 459 | GA12223-PA | 1..459 | 1..453 | 2246 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21501-PA | 417 | GM21501-PA | 4..417 | 40..453 | 2231 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10996-PA | 452 | GD10996-PA | 1..452 | 1..453 | 2348 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20807-PA | 462 | GJ20807-PA | 1..462 | 1..453 | 2183 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19627-PA | 469 | GK19627-PA | 37..469 | 21..453 | 2180 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12575-PA | 453 | GE12575-PA | 1..453 | 1..453 | 2403 | 97.1 | Plus |
Translation from 62 to 1423
> LD27389.hyp MLLTLRVQGARHWLKSTRCLASSAAPAKSPSSPPQLEVSGSTYATDGWTN VTPKILSYVGANKHLQTDHPLSIIRQRIVNYFYGAYRNQRGNPLFSVYDQ MNPVVTVQQNFDNLLIPADHVSRQKSDCYYINQQHLLRAHTTAHQVELIS GGLDNFLVVGEVYRRDEIDSTHYPVFHQADAVRLVTKDKLFERNPGLELF EETWSGTLADPKLILPSSKFMDQTKQPCHTLEAVKLMEHEMKHVLVGLTK DLFGPRIKYRWVDTYFPFTQPSWELEIYFKDNWLEVLGCGIMRHEILQRS GVHQSIGYAFGVGLERLAMVLFDIPDIRLFWSNDSGFLSQFSEKDLHNLP KYKPISHYPQCTNDLSFWLPQDIEVDAGFSPNDFYDLVRSVAGDMVEQIS LVDKFKHPKTGKSSVCFRIVYRHMERTLTQAEVNEIHKQIASASVDSFNV QIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aats-phe-PA | 453 | CG13348-PA | 1..453 | 1..453 | 2410 | 100 | Plus |