BDGP Sequence Production Resources |
Search the DGRC for LD27406
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 274 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8531-RA |
Protein status: | LD27406.pep: gold |
Preliminary Size: | 2043 |
Sequenced Size: | 2000 |
Gene | Date | Evidence |
---|---|---|
CG8531 | 2001-01-01 | Release 2 assignment |
CG8531 | 2001-11-29 | Blastp of sequenced clone |
CG8531 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8531 | 2008-04-29 | Release 5.5 accounting |
CG8531 | 2008-08-15 | Release 5.9 accounting |
CG8531 | 2008-12-18 | 5.12 accounting |
2000 bp (2000 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069547
> LD27406.complete TCATTGCGTAAAAGTACCCAAAAATTTCGAAATCCAAAATTAACATAGAA CGCCGGTGAGGTCCGTGCGCTGACTCGTCCCCGCCCCTTTTCGAAGCCGA GCAGGAACCGCGGGACTAGATCACCGACATGGCATCGGATCACGATGAGT CCGATGCAGAGCTGGACGAGAACTACTATACGTTTCTGAATTTGCCCCGC GATGCCACTGCGGAGCAGATCAACACGGCGTACCGGAAACAGAGCCGCAT GTTCCACCCGGACAAGCACCTGGATCCGGATAGCAAGAAAATGGCTGAGA TCATGTTCAACCGCACGAAGCGTGCCTACGAGGTCCTCTCTGATCCCCAA CAGCGGGCCATCTACGACTCGGTTGGCGAGAAGGGACTACGGACCGAAGG CTGGGAGATTCTGCACCGAACAAAGACTCCGGATGAGATTCGGGAGGAGT ACGAGCGGCTGGCGCAGGCGGCCGCTGAAAGACGTCTACAGCAGCGGACC AATCCTCGTGGTAACATTACCATCAACGTGAATGCCACGGAGATCTTCGC ACCGTACGACGACTCTGAAATGCCGCACGTAGAGATCGGCTCCATGAGCA TTGCCCAGTCCATCGAGGCTCCGATCACGCGGAAAGATATGATCATCATG AGCGGCAACCTGTACTCATCCAATGGCAATGGTAGCGGTGGCTTCGTGAT CGCCGGCCGACGGCTGCTCAACAAGGGCTGGATAGAGCTATGTGCCGGAG CGGGCAACGGATTCCTTCTGGGTCTTAAGGGTGGCCGCACTCTTAGCCAA AAGCTGACGTTGAATGGAGGCACCAATCTGAACTTTCGTGACCAAGGTGT CATACCCGCCCTGTTCTCCACGCTGGCCGTGCAGCTAGACAAGCACACGA TGGGTAGTCTAACACTAAACGCTGGTTCGCAATCCTCCATGTCCACACAG ATCGATCACTCCAAGGAGACTTACTCGCTGAGTTCGTCGCTGGTGATTGG AACACCACATGTTTACTTCGGTCTTTCCTACACCCGCAAAATGATGGAGA ACGAGCTCAAGCTAAAACTGGCGGCAAAAGTTGGAACCTTTGGCTTTATG GGAGAGTATGGAGTGGAGAAAAAGGTTTCCAAGTACAGTTCTGTGACAGC GACGGTATCGATTGGCGTGCCTTCTGGAGTCATACTTAAATTTAAAATAC TTCGTTCAAATCAATCGTATGTGTTCCCCATCCATCTAAGCGATGAAATA GTACCAGCTGCAGTTTTCTACGCCTCGGTGACTCCAGTCATTGCGTGGTT CTTCATCAAAAGGACTGTGATGGACCCAATGGAGGCGGAGCGAAAGAACA TCGAGGTGGAAAGGACGAAGCGTCAGAATGAGCAGAGACTGTCCGCCAAG AGGCACGAGGCGAGTGCTGCCGTTCATCTAATGCAGGCCACGTACAATAG GATCATGACGGAGGAGCTGGCGAGGAATGGGCTGATTGTCACACGAGCTG TCTACGGCTGTACCTTGGCGGGCGGCAGACAGTTCAAGCCAGAGCAATCG CTCGACGTCACCGTAGCCATTCAATGCATGGTCAAGAACGGGACCCTGCA GCTGCATGATTCATCAAAGAGCGACCTGCCCGGCTTCTATGATCCGGGCA TCGGCGAAGACAAGATTCTGCGGATAGAGTACACCTATCAAAACCAGTTC GAAGTGATTCACATCAAGGACAACGAGGCGCTGCGACTGCCGCTGCGACA ACCGCTGTCAGGATAGTGGGGCCTTACTGCTCTGCACGACAATTAGTTTA AATCTTCAGTTGTGTTTGTAACTTGTTTATATTCTTGATAGAAAAGACCC ATTCCCAGGACTTGGGGGCAAATGTCAGATCGTATATTTCCCCAGTTTAC AATACCACTCTGTAACTCGCTATTTTTGGGATACTTACGAGATCCGAACA GCGCAATAAATCACAAAACCAAGAGAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10144072..10144650 | 204..782 | 2880 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 10145231..10145654 | 1196..1619 | 2120 | 100 | Plus |
chr2R | 21145070 | chr2R | 10145715..10146072 | 1618..1975 | 1790 | 100 | Plus |
chr2R | 21145070 | chr2R | 10144705..10145003 | 780..1078 | 1495 | 100 | Plus |
chr2R | 21145070 | chr2R | 10143804..10144007 | 1..204 | 1020 | 100 | Plus |
chr2R | 21145070 | chr2R | 10145057..10145173 | 1079..1195 | 585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14256787..14257365 | 204..782 | 2895 | 100 | Plus |
2R | 25286936 | 2R | 14257946..14258369 | 1196..1619 | 2120 | 100 | Plus |
2R | 25286936 | 2R | 14258430..14258789 | 1618..1977 | 1800 | 100 | Plus |
2R | 25286936 | 2R | 14257420..14257718 | 780..1078 | 1495 | 100 | Plus |
2R | 25286936 | 2R | 14256519..14256722 | 1..204 | 1020 | 100 | Plus |
2R | 25286936 | 2R | 14257772..14257888 | 1079..1195 | 585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14257986..14258564 | 204..782 | 2895 | 100 | Plus |
2R | 25260384 | 2R | 14259145..14259568 | 1196..1619 | 2120 | 100 | Plus |
2R | 25260384 | 2R | 14259629..14259988 | 1618..1977 | 1800 | 100 | Plus |
2R | 25260384 | 2R | 14258619..14258917 | 780..1078 | 1495 | 100 | Plus |
2R | 25260384 | 2R | 14257718..14257921 | 1..204 | 1020 | 100 | Plus |
2R | 25260384 | 2R | 14258971..14259087 | 1079..1195 | 585 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10143804..10144006 | 1..203 | 100 | -> | Plus |
chr2R | 10144072..10144648 | 204..780 | 99 | -> | Plus |
chr2R | 10144706..10145003 | 781..1078 | 100 | -> | Plus |
chr2R | 10145057..10145173 | 1079..1195 | 100 | -> | Plus |
chr2R | 10145231..10145654 | 1196..1619 | 100 | -> | Plus |
chr2R | 10145717..10146072 | 1620..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 1..1638 | 129..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 1..1638 | 129..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 1..1638 | 129..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 1..1638 | 129..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 1..1638 | 129..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 59..2033 | 1..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 59..2033 | 1..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 27..2001 | 1..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 59..2033 | 1..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8531-RA | 27..2001 | 1..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14256519..14256721 | 1..203 | 100 | -> | Plus |
2R | 14256787..14257363 | 204..780 | 100 | -> | Plus |
2R | 14257421..14257718 | 781..1078 | 100 | -> | Plus |
2R | 14257772..14257888 | 1079..1195 | 100 | -> | Plus |
2R | 14257946..14258369 | 1196..1619 | 100 | -> | Plus |
2R | 14258432..14258787 | 1620..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14256519..14256721 | 1..203 | 100 | -> | Plus |
2R | 14256787..14257363 | 204..780 | 100 | -> | Plus |
2R | 14257421..14257718 | 781..1078 | 100 | -> | Plus |
2R | 14257772..14257888 | 1079..1195 | 100 | -> | Plus |
2R | 14257946..14258369 | 1196..1619 | 100 | -> | Plus |
2R | 14258432..14258787 | 1620..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14256519..14256721 | 1..203 | 100 | -> | Plus |
2R | 14256787..14257363 | 204..780 | 100 | -> | Plus |
2R | 14257421..14257718 | 781..1078 | 100 | -> | Plus |
2R | 14257772..14257888 | 1079..1195 | 100 | -> | Plus |
2R | 14257946..14258369 | 1196..1619 | 100 | -> | Plus |
2R | 14258432..14258787 | 1620..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10144926..10145223 | 781..1078 | 100 | -> | Plus |
arm_2R | 10145277..10145393 | 1079..1195 | 100 | -> | Plus |
arm_2R | 10144024..10144226 | 1..203 | 100 | -> | Plus |
arm_2R | 10144292..10144868 | 204..780 | 100 | -> | Plus |
arm_2R | 10145451..10145874 | 1196..1619 | 100 | -> | Plus |
arm_2R | 10145937..10146292 | 1620..1975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14257986..14258562 | 204..780 | 100 | -> | Plus |
2R | 14258620..14258917 | 781..1078 | 100 | -> | Plus |
2R | 14258971..14259087 | 1079..1195 | 100 | -> | Plus |
2R | 14259145..14259568 | 1196..1619 | 100 | -> | Plus |
2R | 14259631..14259986 | 1620..1975 | 100 | Plus | |
2R | 14257718..14257920 | 1..203 | 100 | -> | Plus |
Translation from 128 to 1765
> LD27406.hyp MASDHDESDAELDENYYTFLNLPRDATAEQINTAYRKQSRMFHPDKHLDP DSKKMAEIMFNRTKRAYEVLSDPQQRAIYDSVGEKGLRTEGWEILHRTKT PDEIREEYERLAQAAAERRLQQRTNPRGNITINVNATEIFAPYDDSEMPH VEIGSMSIAQSIEAPITRKDMIIMSGNLYSSNGNGSGGFVIAGRRLLNKG WIELCAGAGNGFLLGLKGGRTLSQKLTLNGGTNLNFRDQGVIPALFSTLA VQLDKHTMGSLTLNAGSQSSMSTQIDHSKETYSLSSSLVIGTPHVYFGLS YTRKMMENELKLKLAAKVGTFGFMGEYGVEKKVSKYSSVTATVSIGVPSG VILKFKILRSNQSYVFPIHLSDEIVPAAVFYASVTPVIAWFFIKRTVMDP MEAERKNIEVERTKRQNEQRLSAKRHEASAAVHLMQATYNRIMTEELARN GLIVTRAVYGCTLAGGRQFKPEQSLDVTVAIQCMVKNGTLQLHDSSKSDL PGFYDPGIGEDKILRIEYTYQNQFEVIHIKDNEALRLPLRQPLSG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8531-PA | 545 | CG8531-PA | 1..545 | 1..545 | 2790 | 100 | Plus |
CG5001-PC | 346 | CG5001-PC | 1..76 | 12..91 | 164 | 42.5 | Plus |
CG5001-PD | 350 | CG5001-PD | 1..76 | 12..91 | 164 | 42.5 | Plus |
CG5001-PA | 350 | CG5001-PA | 1..76 | 12..91 | 164 | 42.5 | Plus |
CG5001-PB | 350 | CG5001-PB | 1..76 | 12..91 | 164 | 42.5 | Plus |
Translation from 128 to 1765
> LD27406.pep MASDHDESDAELDENYYTFLNLPRDATAEQINTAYRKQSRMFHPDKHLDP DSKKMAEIMFNRTKRAYEVLSDPQQRAIYDSVGEKGLRTEGWEILHRTKT PDEIREEYERLAQAAAERRLQQRTNPRGNITINVNATEIFAPYDDSEMPH VEIGSMSIAQSIEAPITRKDMIIMSGNLYSSNGNGSGGFVIAGRRLLNKG WIELCAGAGNGFLLGLKGGRTLSQKLTLNGGTNLNFRDQGVIPALFSTLA VQLDKHTMGSLTLNAGSQSSMSTQIDHSKETYSLSSSLVIGTPHVYFGLS YTRKMMENELKLKLAAKVGTFGFMGEYGVEKKVSKYSSVTATVSIGVPSG VILKFKILRSNQSYVFPIHLSDEIVPAAVFYASVTPVIAWFFIKRTVMDP MEAERKNIEVERTKRQNEQRLSAKRHEASAAVHLMQATYNRIMTEELARN GLIVTRAVYGCTLAGGRQFKPEQSLDVTVAIQCMVKNGTLQLHDSSKSDL PGFYDPGIGEDKILRIEYTYQNQFEVIHIKDNEALRLPLRQPLSG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13489-PA | 541 | GF13489-PA | 1..539 | 1..539 | 2690 | 91.1 | Plus |
Dana\GF15175-PA | 346 | GF15175-PA | 3..76 | 14..91 | 163 | 44.9 | Plus |
Dana\GF23490-PA | 130 | GF23490-PA | 1..75 | 12..90 | 158 | 40.5 | Plus |
Dana\GF15647-PA | 391 | GF15647-PA | 5..76 | 15..93 | 156 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20438-PA | 540 | GG20438-PA | 1..539 | 1..539 | 2732 | 93.5 | Plus |
Dere\GG24779-PA | 350 | GG24779-PA | 1..76 | 12..91 | 160 | 42.5 | Plus |
Dere\DnaJ-1-PA | 351 | GG14117-PA | 1..73 | 12..88 | 156 | 41.6 | Plus |
Dere\GG13187-PA | 127 | GG13187-PA | 1..75 | 12..90 | 155 | 38 | Plus |
Dere\GG10228-PA | 389 | GG10228-PA | 5..72 | 15..88 | 155 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21792-PA | 538 | GH21792-PA | 1..537 | 1..538 | 2429 | 81.4 | Plus |
Dgri\GH10346-PA | 397 | GH10346-PA | 5..76 | 15..93 | 169 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8531-PA | 545 | CG8531-PA | 1..545 | 1..545 | 2790 | 100 | Plus |
CG5001-PC | 346 | CG5001-PC | 1..76 | 12..91 | 164 | 42.5 | Plus |
CG5001-PD | 350 | CG5001-PD | 1..76 | 12..91 | 164 | 42.5 | Plus |
CG5001-PA | 350 | CG5001-PA | 1..76 | 12..91 | 164 | 42.5 | Plus |
CG5001-PB | 350 | CG5001-PB | 1..76 | 12..91 | 164 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20540-PA | 538 | GI20540-PA | 1..537 | 1..538 | 2426 | 80.3 | Plus |
Dmoj\GI13174-PA | 352 | GI13174-PA | 1..73 | 12..88 | 151 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10124-PA | 554 | GL10124-PA | 1..513 | 1..513 | 2381 | 84.8 | Plus |
Dper\GL15626-PA | 318 | GL15626-PA | 1..76 | 12..91 | 164 | 43.8 | Plus |
Dper\GL24772-PA | 392 | GL24772-PA | 5..76 | 15..93 | 158 | 50 | Plus |
Dper\GL25452-PA | 129 | GL25452-PA | 3..75 | 14..90 | 146 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21141-PA | 540 | GA21141-PA | 1..539 | 1..539 | 2511 | 84.8 | Plus |
Dpse\GA18584-PA | 346 | GA18584-PA | 1..76 | 12..91 | 164 | 43.8 | Plus |
Dpse\GA22062-PA | 392 | GA22062-PA | 5..76 | 15..93 | 158 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21524-PA | 542 | GM21524-PA | 1..542 | 1..545 | 2835 | 97.1 | Plus |
Dsec\GM16806-PA | 350 | GM16806-PA | 1..76 | 12..91 | 163 | 42.5 | Plus |
Dsec\GM25845-PA | 389 | GM25845-PA | 5..78 | 15..92 | 158 | 49.4 | Plus |
Dsec\GM22099-PA | 128 | GM22099-PA | 1..75 | 12..90 | 153 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11034-PA | 542 | GD11034-PA | 1..542 | 1..545 | 2824 | 96.7 | Plus |
Dsim\GD23083-PA | 346 | GD23083-PA | 1..76 | 12..91 | 163 | 42.5 | Plus |
Dsim\GD22085-PA | 389 | GD22085-PA | 5..76 | 15..93 | 160 | 51.2 | Plus |
Dsim\GD12075-PA | 128 | GD12075-PA | 1..75 | 12..90 | 153 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22390-PA | 538 | GJ22390-PA | 1..537 | 1..538 | 2407 | 81.4 | Plus |
Dvir\GJ10994-PA | 393 | GJ10994-PA | 5..76 | 15..93 | 163 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20781-PA | 549 | GK20781-PA | 1..537 | 1..538 | 2469 | 82.9 | Plus |
Dwil\GK19161-PA | 125 | GK19161-PA | 1..73 | 12..88 | 168 | 42.9 | Plus |
Dwil\GK15183-PA | 346 | GK15183-PA | 1..76 | 12..91 | 165 | 43.8 | Plus |
Dwil\GK14806-PA | 396 | GK14806-PA | 5..76 | 15..93 | 153 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13569-PA | 543 | GE13569-PA | 1..543 | 1..545 | 2783 | 94.9 | Plus |
Dyak\GE17451-PA | 350 | GE17451-PA | 1..76 | 12..91 | 160 | 42.5 | Plus |
Dyak\GE11908-PA | 389 | GE11908-PA | 5..72 | 15..88 | 159 | 50.7 | Plus |
Dyak\GE22992-PA | 127 | GE22992-PA | 1..75 | 12..90 | 154 | 38 | Plus |
Dyak\GE19512-PA | 127 | GE19512-PA | 1..75 | 12..90 | 154 | 38 | Plus |