BDGP Sequence Production Resources |
Search the DGRC for LD27413
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 274 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8079-RA |
Protein status: | LD27413.pep: gold |
Preliminary Size: | 2129 |
Sequenced Size: | 2131 |
Gene | Date | Evidence |
---|---|---|
CG8079 | 2001-01-01 | Release 2 assignment |
CG8079 | 2001-11-29 | Blastp of sequenced clone |
CG8079 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8079 | 2008-04-29 | Release 5.5 accounting |
CG8079 | 2008-08-15 | Release 5.9 accounting |
CG8079 | 2008-12-18 | 5.12 accounting |
2131 bp (2131 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069548
> LD27413.complete CCTATAAAAAGTTGATTTAGATTCGACGGTTGTTAAACAATGTCGTTACC GGCTGAAGAGGAGGATTTGGCGGACACTGTCGCCAAGTACGATTCCATCG AATTGAAGAGCATACAGGACCTGGAAACCTGCGAGCAGCAACAACTACTG CAGTACGTCGAAAAGCTGCACGGGATTATCCGCAAATACGACACCAAACT GGCGTCCTATAAACAAAAACTCCTACACTACGTAAGCCGGGAAGAAAAGG TTTCGTGTGACAAAGCCAGCCAAGCAACTGAATCGGAATTACAAGAATGC CAGTATTCCATGGAAAACGATGAGGATACTAACAAAAAAGACCAGCCCAA CGATTTATCGGCGACGGACGCCTTCAGTTTTGTGGACGAAATGAGGCAGG CAGCCAAGCACGCCGAAAACCTGAACAACTTCGTTTACGAGCACACCTCT GGCATGTACTACGATCCCAAGACGGGATACTACTATAACGCGGAGTACGG GCTGTACTACGATGGTAACAACGGCTGCTACTACAGCTATGATCACGCCA AAGACTCGTACGAGTTCCACTCTCAGGCCCAGGTACAGGCGAACGATGCG GCCAAACCGGAATCGGAGGACGAGGATTTGGAGGTGCAGTTCGATGAGCT GGGAGGCGTCATTACGGACCACGAAACGCTGAAGAAGATTAAGGCCGAGA AGCAAAAGGCCAAAGATCAAGCTGAAAAATCCAAGCGCAAAGCCAAGAAA AAGAAGAGTAAAAAGCACAGCAAGAAGAGATCCAAGAAGGAGCGCCGTCA CAAGTCCAAGAAGCGTCACAGGCATTCTGATGATGAGCGGTCTAATGATG CCGAGGAGGGCGAGCTGTCGCAAAGCAGCGACTCCAGTTCCGACTCTAGC AACGAGGATAGCAGCAGCAACACGGAAGACAGCAGTGTTCCAGTTTTCAA GGCTGCCGGACGCTTTCAAGACATTGCTAAAAAGTATCCACCCTCCCTCC GCATCATTGTCCAGGAGACTAACGTAGAGTCGCTGAAAGTGGGAAGCCTG CATCTAATCACATACAAAGGTGGATCTCTTGGACGGGAGGGCGCTCACGA TGTTATCATTCCGGACGTGAACGTCAGCAAGTGCCACTTAAAGTTTAAGT ATGAGAACAAGTTGGGAATCTACCAATGTCTTGATCTGGGCTCCCGAAAC GGTACCATTCTCAATGGATCCCCAATGTCCAGCGACGCCATGGATCTCGT TCACGGCAGTGTTATCACTCTGGGCCAAACAAGACTACTGTGTCATGTCC ACGAGGGTAACAGTACCTGCGGTTTGTGCGAGCCGGGCCTTTTGATAGAG AATTCTCCGCCGGTAGTGGCCGCTGTTGCCTCATCCACCGCATCCGTATT ATCTCACAAGGAGCAGTTAAAAAAACTGCAGCGCAAATATGGACTAGAAA ACGAAAAATTCGTTGATACTAGCGGCAATGGGCAGTCCAACTACAATGAT CGTGCCGCAACAAGGAGAGTCCAGGTGGGCAGCAGTACAGATAAAGAAAA GACTGAGGTGGCTTGTGTGAACACTGAAATCGGTAGCTCTAATAAGGGTT TTAAAATGCTGAGTAAATTGGGCTGGCAAAAGGGCGAAAAACTGGGCAAA ACAAATGCCAGTGCTGGACTTTTGGAGCCGATCAATGTGGTAGCCAATGA GGGCACTAGCGGTCTGGGAAACAGTGACCCAGTGCTGTCCAGCTCCAGAA CCATTGACAAACGGAAGCTGGCCAACTTGAAGATCACTCAGGCGCGATAT CAGCGCGCCAGTGATATGTTTGGACAATCGGATGATAGTGATTAGAAAGA CATTTTGAATGATGTTGGAAACACATTTAATTAACAATTACTCAAACATA TTTATAAGTGTATGTAAATATATATGTATGTATATACACATAGATTCTAT GTATGTATATATTAATTCAAAAATCTTGCTATAAGGTTAAGCTATCAGTC AATTAATTAATTTAGCTTCGCTTATAAACAAAAAGAATAGGGGAAGGTAA TGTTAAATAAATACGACTTCGCACACGTTGGTCTAAACTAATTGCGAGCC TAATGGGCATACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11109705..11110192 | 969..1456 | 2440 | 100 | Plus |
chr2R | 21145070 | chr2R | 11110593..11111025 | 1680..2112 | 2165 | 100 | Plus |
chr2R | 21145070 | chr2R | 11109251..11109635 | 586..970 | 1925 | 100 | Plus |
chr2R | 21145070 | chr2R | 11105635..11105867 | 1..233 | 1165 | 100 | Plus |
chr2R | 21145070 | chr2R | 11108639..11108776 | 356..493 | 690 | 100 | Plus |
chr2R | 21145070 | chr2R | 11105923..11106046 | 232..355 | 620 | 100 | Plus |
chr2R | 21145070 | chr2R | 11110252..11110369 | 1457..1574 | 590 | 100 | Plus |
chr2R | 21145070 | chr2R | 11110431..11110536 | 1575..1680 | 530 | 100 | Plus |
chr2R | 21145070 | chr2R | 11108937..11109034 | 492..589 | 490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15222495..15222982 | 969..1456 | 2440 | 100 | Plus |
2R | 25286936 | 2R | 15223383..15223818 | 1680..2115 | 2180 | 100 | Plus |
2R | 25286936 | 2R | 15222041..15222425 | 586..970 | 1925 | 100 | Plus |
2R | 25286936 | 2R | 15218425..15218657 | 1..233 | 1165 | 100 | Plus |
2R | 25286936 | 2R | 15221429..15221566 | 356..493 | 690 | 100 | Plus |
2R | 25286936 | 2R | 15218713..15218836 | 232..355 | 620 | 100 | Plus |
2R | 25286936 | 2R | 15223042..15223159 | 1457..1574 | 590 | 100 | Plus |
2R | 25286936 | 2R | 15223221..15223326 | 1575..1680 | 530 | 100 | Plus |
2R | 25286936 | 2R | 15221727..15221824 | 492..589 | 490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15223694..15224181 | 969..1456 | 2440 | 100 | Plus |
2R | 25260384 | 2R | 15224582..15225017 | 1680..2115 | 2180 | 100 | Plus |
2R | 25260384 | 2R | 15223240..15223624 | 586..970 | 1925 | 100 | Plus |
2R | 25260384 | 2R | 15219624..15219856 | 1..233 | 1165 | 100 | Plus |
2R | 25260384 | 2R | 15222628..15222765 | 356..493 | 690 | 100 | Plus |
2R | 25260384 | 2R | 15219912..15220035 | 232..355 | 620 | 100 | Plus |
2R | 25260384 | 2R | 15224241..15224358 | 1457..1574 | 590 | 100 | Plus |
2R | 25260384 | 2R | 15224420..15224525 | 1575..1680 | 530 | 100 | Plus |
2R | 25260384 | 2R | 15222926..15223023 | 492..589 | 490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NOF | 4347 | NOF FB 4347bp Derived from X51937 (g8297) (Rel. 44, Last updated, Version 6). | 3898..4026 | 2079..1954 | 145 | 60.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11105635..11105865 | 1..231 | 100 | -> | Plus |
chr2R | 11105923..11106046 | 232..355 | 100 | -> | Plus |
chr2R | 11108639..11108775 | 356..492 | 100 | -> | Plus |
chr2R | 11108938..11109033 | 493..588 | 100 | -> | Plus |
chr2R | 11109254..11109635 | 589..970 | 100 | -> | Plus |
chr2R | 11109707..11110192 | 971..1456 | 100 | -> | Plus |
chr2R | 11110252..11110369 | 1457..1574 | 100 | -> | Plus |
chr2R | 11110431..11110536 | 1575..1680 | 100 | -> | Plus |
chr2R | 11110594..11111025 | 1681..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 1..1806 | 40..1845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 1..1806 | 40..1845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 1..1806 | 40..1845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 1..1806 | 40..1845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 1..1806 | 40..1845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 45..2156 | 1..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 45..2156 | 1..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 45..2156 | 1..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 45..2156 | 1..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8079-RA | 45..2156 | 1..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15221728..15221823 | 493..588 | 100 | -> | Plus |
2R | 15218425..15218655 | 1..231 | 100 | -> | Plus |
2R | 15218713..15218836 | 232..355 | 100 | -> | Plus |
2R | 15221429..15221565 | 356..492 | 100 | -> | Plus |
2R | 15222044..15222425 | 589..970 | 100 | -> | Plus |
2R | 15222497..15222982 | 971..1456 | 100 | -> | Plus |
2R | 15223042..15223159 | 1457..1574 | 100 | -> | Plus |
2R | 15223221..15223326 | 1575..1680 | 100 | -> | Plus |
2R | 15223384..15223815 | 1681..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15221728..15221823 | 493..588 | 100 | -> | Plus |
2R | 15218425..15218655 | 1..231 | 100 | -> | Plus |
2R | 15218713..15218836 | 232..355 | 100 | -> | Plus |
2R | 15221429..15221565 | 356..492 | 100 | -> | Plus |
2R | 15222044..15222425 | 589..970 | 100 | -> | Plus |
2R | 15222497..15222982 | 971..1456 | 100 | -> | Plus |
2R | 15223042..15223159 | 1457..1574 | 100 | -> | Plus |
2R | 15223221..15223326 | 1575..1680 | 100 | -> | Plus |
2R | 15223384..15223815 | 1681..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15221728..15221823 | 493..588 | 100 | -> | Plus |
2R | 15218425..15218655 | 1..231 | 100 | -> | Plus |
2R | 15218713..15218836 | 232..355 | 100 | -> | Plus |
2R | 15221429..15221565 | 356..492 | 100 | -> | Plus |
2R | 15222044..15222425 | 589..970 | 100 | -> | Plus |
2R | 15222497..15222982 | 971..1456 | 100 | -> | Plus |
2R | 15223042..15223159 | 1457..1574 | 100 | -> | Plus |
2R | 15223221..15223326 | 1575..1680 | 100 | -> | Plus |
2R | 15223384..15223815 | 1681..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11105930..11106160 | 1..231 | 100 | -> | Plus |
arm_2R | 11106218..11106341 | 232..355 | 100 | -> | Plus |
arm_2R | 11108934..11109070 | 356..492 | 100 | -> | Plus |
arm_2R | 11109233..11109328 | 493..588 | 100 | -> | Plus |
arm_2R | 11109549..11109930 | 589..970 | 100 | -> | Plus |
arm_2R | 11110002..11110487 | 971..1456 | 100 | -> | Plus |
arm_2R | 11110547..11110664 | 1457..1574 | 100 | -> | Plus |
arm_2R | 11110726..11110831 | 1575..1680 | 100 | -> | Plus |
arm_2R | 11110889..11111320 | 1681..2112 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15223243..15223624 | 589..970 | 100 | -> | Plus |
2R | 15219624..15219854 | 1..231 | 100 | -> | Plus |
2R | 15219912..15220035 | 232..355 | 100 | -> | Plus |
2R | 15222628..15222764 | 356..492 | 100 | -> | Plus |
2R | 15222927..15223022 | 493..588 | 100 | -> | Plus |
2R | 15223696..15224181 | 971..1456 | 100 | -> | Plus |
2R | 15224241..15224358 | 1457..1574 | 100 | -> | Plus |
2R | 15224420..15224525 | 1575..1680 | 100 | -> | Plus |
2R | 15224583..15225014 | 1681..2112 | 100 | Plus |
Translation from 39 to 1844
> LD27413.hyp MSLPAEEEDLADTVAKYDSIELKSIQDLETCEQQQLLQYVEKLHGIIRKY DTKLASYKQKLLHYVSREEKVSCDKASQATESELQECQYSMENDEDTNKK DQPNDLSATDAFSFVDEMRQAAKHAENLNNFVYEHTSGMYYDPKTGYYYN AEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQVQANDAAKPESEDEDLEVQ FDELGGVITDHETLKKIKAEKQKAKDQAEKSKRKAKKKKSKKHSKKRSKK ERRHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSSNEDSSSNTEDSSV PVFKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLITYKGGSLGRE GAHDVIIPDVNVSKCHLKFKYENKLGIYQCLDLGSRNGTILNGSPMSSDA MDLVHGSVITLGQTRLLCHVHEGNSTCGLCEPGLLIENSPPVVAAVASST ASVLSHKEQLKKLQRKYGLENEKFVDTSGNGQSNYNDRAATRRVQVGSST DKEKTEVACVNTEIGSSNKGFKMLSKLGWQKGEKLGKTNASAGLLEPINV VANEGTSGLGNSDPVLSSSRTIDKRKLANLKITQARYQRASDMFGQSDDS D*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8079-PA | 601 | CG8079-PA | 1..601 | 1..601 | 3101 | 100 | Plus |
CG8079-PB | 599 | CG8079-PB | 1..599 | 1..601 | 3079 | 99.7 | Plus |
CG8079-PC | 501 | CG8079-PC | 211..501 | 311..601 | 1490 | 100 | Plus |
CG8079-PC | 501 | CG8079-PC | 1..183 | 1..183 | 974 | 100 | Plus |
CG8079-PE | 229 | CG8079-PE | 1..183 | 1..183 | 974 | 100 | Plus |
CG8079-PD | 250 | CG8079-PD | 1..183 | 1..183 | 974 | 100 | Plus |
Translation from 39 to 1844
> LD27413.pep MSLPAEEEDLADTVAKYDSIELKSIQDLETCEQQQLLQYVEKLHGIIRKY DTKLASYKQKLLHYVSREEKVSCDKASQATESELQECQYSMENDEDTNKK DQPNDLSATDAFSFVDEMRQAAKHAENLNNFVYEHTSGMYYDPKTGYYYN AEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQVQANDAAKPESEDEDLEVQ FDELGGVITDHETLKKIKAEKQKAKDQAEKSKRKAKKKKSKKHSKKRSKK ERRHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSSNEDSSSNTEDSSV PVFKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLITYKGGSLGRE GAHDVIIPDVNVSKCHLKFKYENKLGIYQCLDLGSRNGTILNGSPMSSDA MDLVHGSVITLGQTRLLCHVHEGNSTCGLCEPGLLIENSPPVVAAVASST ASVLSHKEQLKKLQRKYGLENEKFVDTSGNGQSNYNDRAATRRVQVGSST DKEKTEVACVNTEIGSSNKGFKMLSKLGWQKGEKLGKTNASAGLLEPINV VANEGTSGLGNSDPVLSSSRTIDKRKLANLKITQARYQRASDMFGQSDDS D*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12318-PA | 611 | GF12318-PA | 17..611 | 17..601 | 1994 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20505-PA | 604 | GG20505-PA | 1..604 | 1..601 | 2777 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20421-PA | 636 | GH20421-PA | 19..636 | 17..601 | 1813 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8079-PA | 601 | CG8079-PA | 1..601 | 1..601 | 3101 | 100 | Plus |
CG8079-PB | 599 | CG8079-PB | 1..599 | 1..601 | 3079 | 99.7 | Plus |
CG8079-PC | 501 | CG8079-PC | 211..501 | 311..601 | 1490 | 100 | Plus |
CG8079-PC | 501 | CG8079-PC | 1..183 | 1..183 | 974 | 100 | Plus |
CG8079-PE | 229 | CG8079-PE | 1..183 | 1..183 | 974 | 100 | Plus |
CG8079-PD | 250 | CG8079-PD | 1..183 | 1..183 | 974 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19605-PA | 502 | GI19605-PA | 1..502 | 118..601 | 1620 | 70.8 | Plus |
Dmoj\GI19604-PA | 74 | GI19604-PA | 12..66 | 11..65 | 188 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11084-PA | 606 | GL11084-PA | 1..606 | 1..601 | 1971 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20808-PA | 616 | GA20808-PA | 1..616 | 1..601 | 1961 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21598-PA | 603 | GM21598-PA | 1..603 | 1..601 | 2911 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Hex-C-PA | 601 | GD11104-PA | 1..601 | 1..601 | 3108 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14969-PA | 623 | GJ14969-PA | 19..623 | 17..601 | 1833 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21767-PA | 615 | GK21767-PA | 33..615 | 17..601 | 1922 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13639-PA | 602 | GE13639-PA | 1..600 | 1..598 | 2766 | 93.5 | Plus |