Clone LD27520 Report

Search the DGRC for LD27520

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:275
Well:20
Vector:pOT2
Associated Gene/TranscriptRasGAP1-RA
Protein status:LD27520.pep: gold
Preliminary Size:4939
Sequenced Size:5426

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6721 2001-01-01 Release 2 assignment
CG6721 2001-07-04 Blastp of sequenced clone
CG6721 2003-01-01 Sim4 clustering to Release 3
Gap1 2008-04-29 Release 5.5 accounting
Gap1 2008-08-15 Release 5.9 accounting
Gap1 2008-12-18 5.12 accounting

Clone Sequence Records

LD27520.complete Sequence

5426 bp (5426 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051747

> LD27520.complete
AAAGGTTGTTCGCGGATGCGTGTAAACCCGCAAAGCAAATAAACTCGGAG
AACCAAGTTTTTGCGATTCTGATTCAAGCAACCGAATTACTTTCCATACT
TCGATAATATAATCCCACGTCTGCTAGTGCGTGCAAAAAACAGTTTGTAG
TTAAAACGAAATACTAAAATCAGTCGAGCCCTGAAGCAACAGGGAAAGTG
CATTTCGTGAGCGGCAAATCGACTCATATTCCCGTCACACCAGCTCAATG
CACAATGCAACGCTGCAGCGAGTGATGAAATTCAAATGCAAATAGCCGGC
TAATAAACCTGTTAAAGAAAAACAAATAATTTCGAGTTATTAAAGTTTCG
TGAAGATCGAGTGAAGGAGTTAGATAAATTTCCAATCGCGTGTTGCAAGT
TCCCCAGTGGGTAGCTGACAAAAAGCTGGCTGCTTTAAGCGCACAATGCT
GCTGAAGAAGAAGCGCTATATGTTCGACGAGCGAGACGACAATAATATTA
ACTCGCCCGTCGCCGTCGAGCCAAGCAGCAACAACAACAAAATGGCCGAT
ACACGCGAAGTGCGCATTGAAGAGCAATTAAAAGTGAAAATTGGCGAGGC
AAAGAATCTGAGCAGTCGCAATGCGGCCAACACTAGCTGCAGCACACAGG
GCACTCGCGATGTCTACTGCACAATTGCGTTGGACCAGGAGGAGATCTGC
CGCACACCCACCATCGAACGCACACTGACGCCGTTCTTCGGCGAGGAGCA
CCAGTTCAAGATTCCGCGCCGCTTCCGCTACCTGACCATCTATCTGTGGG
ATCGTGATATGAAGCAGGATAAACCCATTGGCAAGATAGCGATCAAGCGG
GAGGAGCTGCACATGTACAATCACAAGGATCACTGGTTCTCATTGAGGCC
AGTCGACCAAGACTCCGAGGTTCAGGGCATGGTTAATGTGGAGGTGGCAT
TTACGGAAGCCCAACAGACCCAGTCGCTCTCCGAGGGCATAGATCTGGGA
CAGCACACATTGCGGCATCATCAGAACCTGCCACACCACAGCCACCAGCA
GCGGGCGCATCTAAACGATTACAAGGAGAACAGTGAACTGAGTAACATAC
AGCGGGCATCAGCAGCTGCAGCGAGTTCCTCATCGGCAGCCATGACACTC
AAGACACGAGCGGCCGGTCTATTTGGTCACGTGCATCATCCGCCATCGCA
GACTCAGCACTTTCCGATCATCAATACCACATCCACGTCGTCGGATCAGT
TGTCCAATTGGAAATCGCATGGGAGATTCGTTGGTGTGACCATCAAAGTA
CCAGCCTGCGTGGACCTGGCCAAGAAGCAGGGCACGTGCGATCCATTTGT
GGTCTGTACCGCCCACTATAGCAACAAGCACCAGGTGACGCGACGAACTA
AGCAGCGCAAAAAGACCGTGGATCCGGAGTTTGACGAGGCCATGTACTTT
GATCTTCACATCGATGCGGATGCGGGTAGCACAAATACCACTGGAAGTAA
CAAGAGTGCCGGTTCCCTGGAATCATCAGCGAACAAGGGCTATTCTATAT
ACCCGGTGGGCGGTGCGGATCTGGTGGAGATTGTGGTGAGCGTGTGGCAC
GACGCACATGGAGCCATGTCCGATAAAGTGTTCCTTGGTGAAGTGCGGCT
ACCAATGCTCAATAAGCAGGAGCAGCAGGCAGTTAATCCATCGGCTTGGT
ACTATCTACAGCCCCGCTCCATGACGCACAGTTCCCGCTCGCTGAACGCC
ACGCCCCGCTCATGTGCGACGCCGCCGGGAACGAGATTAAGCGTGGACTC
GACCATTGGATCACTGCGCTTAAATCTAAACTACACCGCCGATCATGTCT
TCCCGCTGGCCACATACGACGATCTTATGAATCTGCTCCTGGAATCGGTT
GATCAGCGACCCATCACCGTGTCGGCTGTGTCGATCCTAGGCGAGCTGGT
CTCGGGCAAGACGGAGGTGGCCCAGCCGCTGGTGCGACTCTTTACGCACA
CGGAGCGCATTGCGCCGATCATCAAGGCGCTGGCTGACCACGAGATCTCC
CATCTGACAGATCCCACCACTATCTTCCGGGGTAACACCTTGGTCTCTAA
GATGATGGATGAGGCAATGCGATTGTCTGGACTGCACTACCTACATCAGA
CATTGCGTCCGGTTTTGTCGCAGATCGTTGCCGAAAAGAAACCATGTGAG
ATCGATCCCAGCAAGATTAAAGATCGCTCTGCGGTGGACACGAATCTGCA
CAATCTGCAAGATTATGTGGAGCGGGTTTTTGAGGCAATCACCAAGAGCG
CTGATCGCTGTCCGAAAGTTCTGTGTCAGATCTTCCACGACCTTCGCGAG
TGTGCGGGTGAGCATTTCCCCAGCAATCGAGAAGTGCGCTACTCCGTGGT
GTCCGGCTTTATCTTCCTGCGCTTCTTTGCACCCGCTATCCTGGGACCAA
AGCTCTTCGATCTGACCACCGAGCGACTGGATGCCCAAACGAGTCGCACG
CTGACTCTCATCTCCAAGACGATCCAATCGCTGGGTAATCTGGTCAGCTC
CCGGTCGTCGCAACAGACTTGCAAGGAGGAGTTCACCGTCGAGCTGTACA
AGAAGTTCTGCACGGAACAGCACGTGGATGCGGTTAAGCACTTTCTGGAG
GTGATCTCGACGCCCAGTCATGCGAGCAGCAGCGTTCATCCGGCGGCGGC
GGCGGCAACGCCACTGGAACCAGTTTTACTTAAAGAGGGCCTGATGACCA
AGTATCCGACATCCCGGAAGCGTTTTGGCCGGCAGTTCAAACAACGCCAC
TTCCGCCTCACCACCCACTCGCTCAGCTATGCGAAGTCGAAGGGCAAACA
ACCCATCTGTGATATACCGCTCCAGGAGATCGCCAGCGTGGAGCAGCTGA
AGGACAAGAGTTTCAAGATGCAGAACTGCTTTAAGATTGTGCACAACGAT
CGCTCGCTGATTGTGCAGACAACGAACTGCGTGGAGGAGCGCGAGTGGTT
CGACCTGCTGCACAAGATATGTCTGATGAACTCCATCCGGATGCAGTACT
TCCATCCCTCGGCCTTTGTAAGTGGATTCTACAGCTGCTGCGGCCGGTCG
GATGAGAATTCACCGGGCTGTAAGAAGGTGTTGGACAAGACGATGGACTA
CTTCCAGATGGATTTAGTAACGGCGCTGGATCCAGCGCTCGATCTGCAGC
GCATCCACACGCTGATCATGTCTAACATGAGTGTGCTGGAGTCACTGCTA
GATCCGCTCACCTATCACCAGTCTCTGTCGCAGACGCAACACCAACAGCA
CAATCCTCTGGTGCCGCTGGCCACCGATCTGCAGAAGCATTCACCACAGG
CCTTCGCTGAGTTCAAGCGAACGATTGAGAAGCTGAGAGAGAAGGCCTAT
GCCATCGATAGAGATCATCGGGACTACAAGCAGGGCATTACGCGGCAACT
GAAATACGGCAGCAGACAGGCACCCATTGGCGATGATAACTATTGGCATA
TGATGCGAGCCGCCGGCCAGTTGAATCAGCAGCATCACCAGCAGCAGCAA
CATCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAACTTCAGCAGTTCCA
GCCGCAGCCAGTGCTGCCGCAAATGCAGAACGTTCGGGCGTATCCTTATC
AGCCAGCTACGAGCAACATGAACGCCTACTGTCTGCACAACATGCAGTAT
CAGCAGCAGAGATTGCCGTTCCATCAGCAGCAACAGCAGCACCATCAGCA
GCTCCAGCAACAGCAGTCGCAGTTCCAGCCCCTGCGCAGCCATCAACTGC
AGCGCCACAACAACAATTTGAACAACAATAACTGCGGCAATGGATCCTCC
TCCAGTCCATCATCGACCACATCAAGTGTGGTGGCCGCACCGCCCAGCAC
CACATCGTCATCGCAGCCAGCTCCACCGATTTATTAGCGTTCAAGGCTGT
GCGTATTCGCTTTGCCGCGGGCCATTATCACGACCAGGTAAAGGAATACG
CATCGATGTGGCAAACACAACCCCCTACCGCTCCTACGCAACCAGAGGAT
GCTGCTGTACAAAACGATTAATTGTGCTAATTTCTAGGCTCTTGTTTTTT
TTTGTATCATTTTTACGAGTTTAACGTTGTAAAGGTCTAGACTAAGTTTT
TTTAATTAACAGTTTTTATACACCAGATTTTTACGGTACCGCCTACACCA
GCTACAACAACACGAGGAGAAAACAAGAGGAACGGAAACGAAATCTAAAT
ATTTATAAGCCTATTTATTTTTTTGTATGTGCTAACATTATTTTTACACG
AAAACAAAATACCCAATATGGAAAGAGCATTTCTATACTTGTGTGAGCGC
AAAGAGGGCAGAGAACCACTGAAAACTGATAACTTTATAAGCCTAAACTA
CTAAAAACTCAGAAACTGCTAAGATTTTTTAAAGCCTAGCCTAAGTTAAG
TATCGGCGGGATGATGAGTAGCGAAATGAAAATGAAAAGATGTAAATAGC
AGATACACGAGTATATATATATCCCACAGTATGTATGTACATGTGTATGA
TTAACTTCATTATACCAGTTAATTTAGGCGTAGCAAAAATTTCTAAAAAA
TCAACTAAACTAGGCGTTTTGCCCAGAGGCGACACACGCGAAAAGCAAAT
AATTCTAACGCAATCTGAACGCGAGAAAAATACTGCGAAAAGCATGAAAA
AAACATACATTTACATGTATATTTACTTTATATAACTGTCATACAGCTAA
TGTTAAACAACACACGATATGTATTCGGCAAATTCTAGAATACAAACAAA
AAGCATTGTTAAGAACAAATTTACTTCCATTTTGCATATACAAACACATA
CGCACGCACACCTATATTTATTAAATGCATTTAATTTCATATTAAACTTA
AAACGAAAAACAAGTTAATTGTTACACAAACACGATTTGGTTAGCTTCGA
CTTACTTCCACCGATTTGTTTCCAAAGCTCTTCCATATTAATTACACATG
TAATTTACATCTAGAACTAGAATGTTAAATAATCTAATTTTTGCCATATT
TAGTTCAGTGTTCATCAATCGCATTGAAAAGTGTCTTCCTTCGCCGCGTT
CAATCATATTGCCTTTTGTTTATGCATTCCAATCCAATAATTTGTGCATT
TCTTAATTCTAATATCTGCATAATGTACATAGAGATACGAAACGGAGAAA
GAAACACGACGAGATGTTGCTATGAATTTAAATTGTTTGGAGTTTCCAAC
GTGGTTCATATACATATAATTTCACTTGCATTTTAAGGACACAATTATAG
TTTACTTTTACCATGCCTAGCTGATAAGTTGTTGGTACAAAGAATCGAAA
ATAAAAACATAGATATTTTCCAAGGGAAAAATAAAGCGTATCGCCAATGG
ATAAATAAAAAAAAAAAAAAAAAAAA

LD27520.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
Gap1-RB 5588 Gap1-RB 165..5570 1..5406 27030 100 Plus
Gap1.c 5588 Gap1.c 165..5570 1..5406 27030 100 Plus
Gap1.a 5314 Gap1.a 88..4074 1..3987 19935 100 Plus
Gap1.a 5314 Gap1.a 4072..5314 4160..5402 6215 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9830894..9833365 5406..2934 12070 99.5 Minus
chr3L 24539361 chr3L 9835355..9837242 2480..593 9155 99 Minus
chr3L 24539361 chr3L 9846432..9847026 594..1 2850 99 Minus
chr3L 24539361 chr3L 9835034..9835294 2739..2479 1290 99.6 Minus
chr3L 24539361 chr3L 9834270..9834466 2935..2739 985 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:19:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:36:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9839093..9841565 5406..2934 12365 100 Minus
3L 28110227 3L 9843553..9845440 2480..593 9440 100 Minus
3L 28110227 3L 9854664..9855257 594..1 2970 100 Minus
3L 28110227 3L 9843232..9843492 2739..2479 1305 100 Minus
3L 28110227 3L 9842468..9842664 2935..2739 985 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9832193..9834665 5406..2934 12365 100 Minus
3L 28103327 3L 9836653..9838540 2480..593 9440 100 Minus
3L 28103327 3L 9847764..9848357 594..1 2970 100 Minus
3L 28103327 3L 9836332..9836592 2739..2479 1305 100 Minus
3L 28103327 3L 9835568..9835764 2935..2739 985 100 Minus
Blast to na_te.dros performed 2019-03-16 10:36:21
Subject Length Description Subject Range Query Range Score Percent Strand
diver2 4917 diver2 DIVER2 4917bp 537..631 4547..4453 142 61.1 Minus
TART-C 11124 TART-C TARTC 11124bp 10725..10816 4816..4908 120 60.2 Plus

LD27520.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:37:37 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9832613..9832697 3602..3686 100 == Minus
chr3L 9830894..9832533 3766..5406 99 == Minus
chr3L 9832773..9833363 2936..3526 99 <- Minus
chr3L 9834270..9834465 2740..2935 100 <- Minus
chr3L 9835034..9835293 2480..2739 99 <- Minus
chr3L 9835356..9837241 594..2479 98 <- Minus
chr3L 9846433..9847026 1..593 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:56:56 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
Gap1-RB 1..3492 446..3937 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:49:03 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
Gap1-RB 1..3492 446..3937 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:14:12 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
RasGAP1-RC 1..3546 446..3991 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:43:52 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
Gap1-RB 1..3492 446..3937 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:12:35 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
RasGAP1-RC 1..3546 446..3991 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:56:56 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
Gap1-RB 23..5426 1..5404 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:49:03 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
Gap1-RB 23..5426 1..5404 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:14:12 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
RasGAP1-RB 29..5434 1..5406 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:43:52 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
Gap1-RB 23..5426 1..5404 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:12:35 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
RasGAP1-RB 29..5434 1..5406 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:37:37 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9839093..9841563 2936..5406 100 <- Minus
3L 9842468..9842663 2740..2935 100 <- Minus
3L 9843232..9843491 2480..2739 100 <- Minus
3L 9843554..9845439 594..2479 100 <- Minus
3L 9854665..9855257 1..593 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:37:37 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9839093..9841563 2936..5406 100 <- Minus
3L 9842468..9842663 2740..2935 100 <- Minus
3L 9843232..9843491 2480..2739 100 <- Minus
3L 9843554..9845439 594..2479 100 <- Minus
3L 9854665..9855257 1..593 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:37:37 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9839093..9841563 2936..5406 100 <- Minus
3L 9842468..9842663 2740..2935 100 <- Minus
3L 9843232..9843491 2480..2739 100 <- Minus
3L 9843554..9845439 594..2479 100 <- Minus
3L 9854665..9855257 1..593 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:14:12 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9832193..9834663 2936..5406 100 <- Minus
arm_3L 9835568..9835763 2740..2935 100 <- Minus
arm_3L 9836332..9836591 2480..2739 100 <- Minus
arm_3L 9836654..9838539 594..2479 100 <- Minus
arm_3L 9847765..9848357 1..593 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:34:38 Download gff for LD27520.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9832193..9834663 2936..5406 100 <- Minus
3L 9835568..9835763 2740..2935 100 <- Minus
3L 9836332..9836591 2480..2739 100 <- Minus
3L 9836654..9838539 594..2479 100 <- Minus
3L 9847765..9848357 1..593 100   Minus

LD27520.pep Sequence

Translation from 445 to 3936

> LD27520.pep
MLLKKKRYMFDERDDNNINSPVAVEPSSNNNKMADTREVRIEEQLKVKIG
EAKNLSSRNAANTSCSTQGTRDVYCTIALDQEEICRTPTIERTLTPFFGE
EHQFKIPRRFRYLTIYLWDRDMKQDKPIGKIAIKREELHMYNHKDHWFSL
RPVDQDSEVQGMVNVEVAFTEAQQTQSLSEGIDLGQHTLRHHQNLPHHSH
QQRAHLNDYKENSELSNIQRASAAAASSSSAAMTLKTRAAGLFGHVHHPP
SQTQHFPIINTTSTSSDQLSNWKSHGRFVGVTIKVPACVDLAKKQGTCDP
FVVCTAHYSNKHQVTRRTKQRKKTVDPEFDEAMYFDLHIDADAGSTNTTG
SNKSAGSLESSANKGYSIYPVGGADLVEIVVSVWHDAHGAMSDKVFLGEV
RLPMLNKQEQQAVNPSAWYYLQPRSMTHSSRSLNATPRSCATPPGTRLSV
DSTIGSLRLNLNYTADHVFPLATYDDLMNLLLESVDQRPITVSAVSILGE
LVSGKTEVAQPLVRLFTHTERIAPIIKALADHEISHLTDPTTIFRGNTLV
SKMMDEAMRLSGLHYLHQTLRPVLSQIVAEKKPCEIDPSKIKDRSAVDTN
LHNLQDYVERVFEAITKSADRCPKVLCQIFHDLRECAGEHFPSNREVRYS
VVSGFIFLRFFAPAILGPKLFDLTTERLDAQTSRTLTLISKTIQSLGNLV
SSRSSQQTCKEEFTVELYKKFCTEQHVDAVKHFLEVISTPSHASSSVHPA
AAAATPLEPVLLKEGLMTKYPTSRKRFGRQFKQRHFRLTTHSLSYAKSKG
KQPICDIPLQEIASVEQLKDKSFKMQNCFKIVHNDRSLIVQTTNCVEERE
WFDLLHKICLMNSIRMQYFHPSAFVSGFYSCCGRSDENSPGCKKVLDKTM
DYFQMDLVTALDPALDLQRIHTLIMSNMSVLESLLDPLTYHQSLSQTQHQ
QHNPLVPLATDLQKHSPQAFAEFKRTIEKLREKAYAIDRDHRDYKQGITR
QLKYGSRQAPIGDDNYWHMMRAAGQLNQQHHQQQQHQQQQQQQQQQQLQQ
FQPQPVLPQMQNVRAYPYQPATSNMNAYCLHNMQYQQQRLPFHQQQQQHH
QQLQQQQSQFQPLRSHQLQRHNNNLNNNNCGNGSSSSPSSTTSSVVAAPP
STTSSSQPAPPIY*

LD27520.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:16:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24683-PA 1164 GF24683-PA 1..1121 1..1121 4802 86.9 Plus
Dana\GF20186-PA 965 GF20186-PA 608..855 455..707 335 31.5 Plus
Dana\GF19468-PA 1596 GF19468-PA 408..686 454..742 310 30 Plus
Dana\GF16794-PA 2801 GF16794-PA 1263..1529 487..754 263 27 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:16:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14000-PA 1158 GG14000-PA 1..1158 1..1163 6045 96.3 Plus
Dere\GG19350-PA 954 GG19350-PA 610..857 455..707 316 30.3 Plus
Dere\GG19129-PA 1571 GG19129-PA 406..682 456..742 309 29.9 Plus
Dere\GG11448-PA 2802 GG11448-PA 1264..1530 487..754 264 27 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:16:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16534-PA 1016 GH16534-PA 1..1009 33..1005 4169 80.4 Plus
Dgri\GH11772-PA 857 GH11772-PA 33..856 50..839 3324 79.1 Plus
Dgri\GH17640-PA 954 GH17640-PA 610..857 455..707 317 30.3 Plus
Dgri\GH12821-PA 1608 GH12821-PA 402..680 456..744 306 30 Plus
Dgri\GH19449-PA 2802 GH19449-PA 1281..1529 507..754 266 27.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
RasGAP1-PC 1181 CG6721-PC 1..1163 1..1163 6100 100 Plus
RasGAP1-PB 1163 CG6721-PB 1..1163 1..1163 6100 100 Plus
RasGAP1-PA 1163 CG6721-PA 1..1163 1..1163 6100 100 Plus
vap-PF 954 CG9209-PF 610..857 455..707 340 32.7 Plus
vap-PE 954 CG9209-PE 610..857 455..707 340 32.7 Plus
vap-PC 954 CG9209-PC 610..857 455..707 340 32.7 Plus
vap-PB 954 CG9209-PB 610..857 455..707 340 32.7 Plus
vap-PA 954 CG9209-PA 610..857 455..707 340 32.7 Plus
vap-PD 954 CG9209-PD 610..857 455..707 340 32.7 Plus
CG42684-PB 1556 CG42270-PB 406..682 456..742 297 29.9 Plus
CG42684-PH 1563 CG42684-PH 406..682 456..742 297 29.9 Plus
CG42684-PG 1565 CG42684-PG 415..691 456..742 297 29.9 Plus
CG42684-PC 1580 CG42270-PC 430..706 456..742 297 29.9 Plus
CG42684-PD 1583 CG42270-PD 433..709 456..742 297 29.9 Plus
CG42684-PE 1589 CG42684-PE 439..715 456..742 297 29.9 Plus
CG42684-PF 1590 CG42684-PF 433..709 456..742 297 29.9 Plus
CG42684-PA 2009 CG15816-PA 859..1135 456..742 297 29.9 Plus
CG42684-PI 2016 CG42684-PI 859..1135 456..742 297 29.9 Plus
Nf1-PF 2734 CG8318-PF 1249..1530 474..754 271 25.9 Plus
Nf1-PC 2746 CG8318-PC 1249..1530 474..754 271 25.9 Plus
Nf1-PD 2764 CG8318-PD 1249..1530 474..754 271 25.9 Plus
Nf1-PE 2793 CG8318-PE 1249..1530 474..754 271 25.9 Plus
Nf1-PB 2802 CG8318-PB 1249..1530 474..754 271 25.9 Plus
hdc-PC 1080 CG15532-PC 740..874 1025..1163 206 40.1 Plus
X11Lbeta-PD 2066 CG32677-PD 10..191 1022..1160 185 34.6 Plus
X11Lbeta-PE 2129 CG32677-PE 10..191 1022..1160 185 34.6 Plus
X11Lbeta-PA 2139 CG32677-PA 10..191 1022..1160 185 34.6 Plus
CG6118-PB 883 CG6118-PB 102..257 955..1121 184 33.5 Plus
CG6118-PD 966 CG6118-PD 186..341 955..1121 184 33.5 Plus
CG6118-PC 967 CG6118-PC 186..341 955..1121 184 33.5 Plus
Ptip-PA 2294 CG32133-PA 1152..1301 1016..1160 179 36.2 Plus
Tet-PA 2860 CG43444-PA 70..172 1028..1156 178 37.2 Plus
Tet-PE 2866 CG43444-PE 70..172 1028..1156 178 37.2 Plus
Tet-PB 2915 CG43444-PB 70..172 1028..1156 178 37.2 Plus
Tet-PF 2921 CG43444-PF 70..172 1028..1156 178 37.2 Plus
Sp1-PF 726 CG1343-PF 606..721 1018..1158 176 37.6 Plus
CG3638-PH 1136 CG3638-PH 760..908 1025..1159 175 38.9 Plus
CG3638-PL 1224 CG3638-PL 848..996 1025..1159 175 38.9 Plus
CG3638-PG 1472 CG3638-PG 848..996 1025..1159 175 38.9 Plus
CG16711-PC 1497 CG16711-PC 1282..1441 936..1127 175 33.7 Plus
Sp1-PB 520 CG1343-PB 411..511 1018..1140 173 39 Plus
Sp1-PD 715 CG1343-PD 606..706 1018..1140 173 39 Plus
Sp1-PE 720 CG1343-PE 611..711 1018..1140 173 39 Plus
ovo-PA 975 CG6824-PA 186..464 935..1159 170 27.4 Plus
ovo-PD 1028 CG6824-PD 239..517 935..1159 170 27.4 Plus
ovo-PC 1222 CG6824-PC 611..889 935..1159 170 27.4 Plus
ovo-PE 1351 CG6824-PE 740..1018 935..1159 170 27.4 Plus
ovo-PB 1351 CG6824-PB 740..1018 935..1159 170 27.4 Plus
CG3982-PA 349 CG3982-PA 144..296 1033..1160 169 35.1 Plus
CG6700-PB 874 CG6700-PB 106..239 1024..1162 167 36.4 Plus
CG6700-PA 874 CG6700-PA 106..239 1024..1162 167 36.4 Plus
X11Lbeta-PD 2066 CG32677-PD 325..489 978..1133 166 32.6 Plus
X11Lbeta-PE 2129 CG32677-PE 325..489 978..1133 166 32.6 Plus
X11Lbeta-PA 2139 CG32677-PA 325..489 978..1133 166 32.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13821-PA 770 GI13821-PA 1..770 1..765 3228 80.3 Plus
Dmoj\GI13822-PA 417 GI13822-PA 1..417 767..1163 1227 75.3 Plus
Dmoj\GI16079-PA 954 GI16079-PA 610..857 455..707 323 32.3 Plus
Dmoj\GI15924-PA 1584 GI15924-PA 401..679 456..744 296 29.7 Plus
Dmoj\GI24684-PA 2800 GI24684-PA 1279..1527 507..754 259 27.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15068-PA 1183 GL15068-PA 1..1183 1..1163 4708 82.5 Plus
Dper\GL15969-PA 903 GL15969-PA 559..806 455..707 358 32.7 Plus
Dper\GL21812-PA 2804 GL21812-PA 1265..1531 487..754 268 27.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:16:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19811-PA 1182 GA19811-PA 1..1182 1..1163 4705 82.5 Plus
Dpse\GA16990-PA 1605 GA16990-PA 408..686 454..742 309 29.4 Plus
Dpse\GA26413-PB 2768 GA26413-PB 1267..1533 487..754 267 27.3 Plus
Dpse\GA26413-PC 2738 GA26413-PC 1267..1533 487..754 267 27.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24835-PA 1159 GM24835-PA 1..1159 1..1163 6108 97.4 Plus
Dsec\GM11672-PA 933 GM11672-PA 589..836 455..707 317 30.3 Plus
Dsec\GM13523-PA 1556 GM13523-PA 406..682 456..742 309 29.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12887-PA 1159 GD12887-PA 1..1159 1..1163 6100 97.3 Plus
Dsim\GD17363-PA 1420 GD17363-PA 285..561 456..742 311 29.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:17:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11688-PA 1166 GJ11688-PA 1..1051 33..1082 4410 82.2 Plus
Dvir\GJ15727-PA 954 GJ15727-PA 610..857 455..707 327 30.7 Plus
Dvir\GJ16831-PA 1571 GJ16831-PA 402..680 456..744 304 29.7 Plus
Dvir\GJ23901-PA 2623 GJ23901-PA 1281..1529 507..754 270 28.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:17:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12674-PA 1305 GK12674-PA 1..1200 1..1080 4295 74.7 Plus
Dwil\GK20115-PA 956 GK20115-PA 612..859 455..707 328 30.7 Plus
Dwil\GK25320-PA 1566 GK25320-PA 411..687 456..742 311 29.9 Plus
Dwil\GK12879-PA 2806 GK12879-PA 1264..1530 487..754 264 27 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:17:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20296-PA 1167 GE20296-PA 1..1167 1..1163 6107 96.6 Plus
Dyak\GE15997-PA 954 GE15997-PA 610..857 455..707 316 30.3 Plus
Dyak\GE17682-PA 1447 GE17682-PA 288..564 456..742 310 29.9 Plus
Dyak\GE23642-PA 2802 GE23642-PA 1264..1530 487..754 264 27 Plus

LD27520.hyp Sequence

Translation from 445 to 3936

> LD27520.hyp
MLLKKKRYMFDERDDNNINSPVAVEPSSNNNKMADTREVRIEEQLKVKIG
EAKNLSSRNAANTSCSTQGTRDVYCTIALDQEEICRTPTIERTLTPFFGE
EHQFKIPRRFRYLTIYLWDRDMKQDKPIGKIAIKREELHMYNHKDHWFSL
RPVDQDSEVQGMVNVEVAFTEAQQTQSLSEGIDLGQHTLRHHQNLPHHSH
QQRAHLNDYKENSELSNIQRASAAAASSSSAAMTLKTRAAGLFGHVHHPP
SQTQHFPIINTTSTSSDQLSNWKSHGRFVGVTIKVPACVDLAKKQGTCDP
FVVCTAHYSNKHQVTRRTKQRKKTVDPEFDEAMYFDLHIDADAGSTNTTG
SNKSAGSLESSANKGYSIYPVGGADLVEIVVSVWHDAHGAMSDKVFLGEV
RLPMLNKQEQQAVNPSAWYYLQPRSMTHSSRSLNATPRSCATPPGTRLSV
DSTIGSLRLNLNYTADHVFPLATYDDLMNLLLESVDQRPITVSAVSILGE
LVSGKTEVAQPLVRLFTHTERIAPIIKALADHEISHLTDPTTIFRGNTLV
SKMMDEAMRLSGLHYLHQTLRPVLSQIVAEKKPCEIDPSKIKDRSAVDTN
LHNLQDYVERVFEAITKSADRCPKVLCQIFHDLRECAGEHFPSNREVRYS
VVSGFIFLRFFAPAILGPKLFDLTTERLDAQTSRTLTLISKTIQSLGNLV
SSRSSQQTCKEEFTVELYKKFCTEQHVDAVKHFLEVISTPSHASSSVHPA
AAAATPLEPVLLKEGLMTKYPTSRKRFGRQFKQRHFRLTTHSLSYAKSKG
KQPICDIPLQEIASVEQLKDKSFKMQNCFKIVHNDRSLIVQTTNCVEERE
WFDLLHKICLMNSIRMQYFHPSAFVSGFYSCCGRSDENSPGCKKVLDKTM
DYFQMDLVTALDPALDLQRIHTLIMSNMSVLESLLDPLTYHQSLSQTQHQ
QHNPLVPLATDLQKHSPQAFAEFKRTIEKLREKAYAIDRDHRDYKQGITR
QLKYGSRQAPIGDDNYWHMMRAAGQLNQQHHQQQQHQQQQQQQQQQQLQQ
FQPQPVLPQMQNVRAYPYQPATSNMNAYCLHNMQYQQQRLPFHQQQQQHH
QQLQQQQSQFQPLRSHQLQRHNNNLNNNNCGNGSSSSPSSTTSSVVAAPP
STTSSSQPAPPIY*

LD27520.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:38:46
Subject Length Description Subject Range Query Range Score Percent Strand
RasGAP1-PC 1181 CG6721-PC 1..1163 1..1163 6100 100 Plus
RasGAP1-PB 1163 CG6721-PB 1..1163 1..1163 6100 100 Plus
RasGAP1-PA 1163 CG6721-PA 1..1163 1..1163 6100 100 Plus
vap-PF 954 CG9209-PF 610..857 455..707 340 32.7 Plus
vap-PE 954 CG9209-PE 610..857 455..707 340 32.7 Plus