BDGP Sequence Production Resources |
Search the DGRC for LD27537
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 275 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | CTPsyn-RB |
Protein status: | LD27537.pep: gold |
Preliminary Size: | 2515 |
Sequenced Size: | 2423 |
Gene | Date | Evidence |
---|---|---|
CG6854 | 2001-09-19 | Blastp of sequenced clone |
CG6854 | 2008-04-29 | Release 5.5 accounting |
CG6854 | 2008-08-15 | Release 5.9 accounting |
CG6854 | 2008-12-18 | 5.12 accounting |
2423 bp (2423 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058581
> LD27537.complete GCTGGGGTGGTTCGCATTTTGGTTCGGGAATTCGCAATTCCGCATTTCGG CTTCTCGACTTTTCATTCGCGCTCGTGGAAAACGCTCTCGGGACATAACG GAATCTACGGGCCGGCGCGGCTGACCGAGCGCAAAAAAAAACTTTTCGAT TATTATAAACTTGGCGAGACAAAAGTGCGAAATAAAATATATAAAACTCA CTCAATCACTTTGAGAGCGCTAAGATGGCGCCAAAAAAGTCCACCATTGT GCTCAATGTGGAGCAGTTTATTCACGACATCGAGGAGCGCCCGGCCATCT GGAACCGCAATTTCCACTGCAACAAGGCCTTCCTCGAGCAGATGTGGGAC GAGCTGAGCGGAGCGCACAAACTGCCAAGCGAGGTTTACGTTTTGGACGA TGGCGCCGAGGTGGATCTGGATCTGGGAAACTATGAACGGTTTTTGGATG TTACCCTGCATCGGGACAACAACATAACCACCGGAAAAATTTACAAGTTG GTCATTGAGAAGGAGCGCACTGGCGAGTACTTGGGCAAAACGGTTCAAGT TGTCCCACACATCACTGATGCCATTCAGGAATGGGTGGAGCGCGTGGCCC AGACACCCGTTCAGGGATCTTCAAAGCCACAGGTGTGCATCGTGGAATTG GGAGGAACGATTGGTGACATCGAAGGCATGCCTTTCGTAGAGGCCTTCCG TCAGTTTCAGTTCCGCGTAAAGAGAGAGAACTTCTGTTTGGCCCATGTGT CGCTGGTTCCGTTGCCAAAGGCTACCGGAGAACCCAAGACCAAGCCCACA CAAAGTTCGGTCAGAGAACTGAGAGGATGTGGCCTGAGTCCCGATTTGAT TGTCTGCCGATCGGAGAAACCCATTGGACTGGAGGTCAAGGAGAAGATCA GCAACTTTTGTCATGTGGGGCCGGATCAGGTGATATGCATCCACGATTTG AACTCCATTTATCATGTTCCGCTGCTGATGGAGCAGAATGGTGTTATTGA ATACCTAAATGAGCGCCTACAGCTTAATATCGACATGAGCAAGAGGACCA AATGCTTGCAGCAATGGCGAGATTTGGCGCGTCGAACGGAGACCGTTCGC CGTGAAGTTTGCATCGCCGTCGTGGGAAAGTACACCAAGTTCACGGATTC GTACGCCTCCGTAGTTAAAGCCCTGCAACATGCCGCCCTGGCAGTGAATC GCAAACTGGAACTGGTCTTTATCGAGTCGTGCCTGCTGGAGGAGGAAACT TTGCATTCTGAGCCGAGCAAGTACCACAAGGAGTGGCAGAAGCTATGCGA TAGCCATGGCATCCTAGTCCCCGGTGGATTCGGTTCCCGTGGAATGGAGG GCAAGATTCGTGCATGCCAATGGGCGCGAGAGAATCAAAAGCCATTGCTT GGCATCTGCTTGGGTCTGCAAGCGGCGGTCATTGAATTCGCACGAAATAA ACTTGGTCTCAAGGATGCAAACACCACAGAAATCGATCCGAACACAGCTA ATGCCTTGGTCATCGATATGCCAGAGCATCACACGGGTCAATTGGGCGGC ACTATGCGCTTGGGCAAGCGAATAACTGTTTTCTCTGATGGTCCTAGTGT CATTCGCCAGTTGTATGGCAATCCGAAAAGCGTGCAGGAGCGTCATCGGC ATCGTTACGAGGTTAATCCCAAATACGTGCATCTGCTGGAAGAGCAAGGC ATGCGATTTGTGGGCACCGACGTCGACAAAACTAGGATGGAAATCATTGA GCTCAGCGGTCATCCCTACTTTGTTGCCACCCAATATCATCCAGAGTACT TGTCGCGGCCTCTGAAGCCGTCGCCTCCTTTCCTCGGCCTGATCCTGGCC TCAGTGGATCGATTGAACCAATATATTCAGCGCGGTTGCCGCCTGTCGCC CCGCCAGCTATCCGACGCATCCTCGGATGAGGAGGACAGTGTTGTGGGCT TGGCCGGAGCAACAAAATCGCTGAGCTCCTTGAAAATTCCCATTACACCC ACAAATGGAATATCAAAAAGTTGCAATGGTAGCATAAGCACTTCCGACAG CGAAGGTGCCTGCGGAGGCGTTGATCCTACCAATGGCCATAAGTAAACTA GTGAACGGTATCTTATATCCTAAAGTGTTTAACATCCGATTATCAGACGT ACTTTTGTTATCGCAAAACCCCAAAAGTTTGGGATAACTTAAGTATTACT GGGTGGGTATAATACGGTATTTGCGAATTGAAAATTTTGACCTTTTATGA AAGAGGCATTAATAATAAGAAACCCTTTATAATTTCTCCTAAGCTTAAGT AAACTACGATGTTACTTTCCGTACATTTTTAATTTATATGAAAATCTTAA TTCATATATATTTTTTGGATGCGAAAAAAAAAATAACTAATGGAACAATT TCAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15101736..15103085 | 1052..2402 | 6630 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 15101168..15101671 | 548..1051 | 2490 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 15098834..15099047 | 166..379 | 1070 | 100 | Plus |
chr3L | 24539361 | chr3L | 15100899..15101069 | 379..549 | 855 | 100 | Plus |
chr3L | 24539361 | chr3L | 15095980..15096139 | 7..166 | 800 | 100 | Plus |
chr3L | 24539361 | chr3L | 15092315..15092549 | 2135..2370 | 690 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15111653..15113006 | 1052..2405 | 6770 | 100 | Plus |
3L | 28110227 | 3L | 15111085..15111588 | 548..1051 | 2520 | 100 | Plus |
3L | 28110227 | 3L | 15108746..15108959 | 166..379 | 1070 | 100 | Plus |
3L | 28110227 | 3L | 15110816..15110986 | 379..549 | 855 | 100 | Plus |
3L | 28110227 | 3L | 15105909..15106068 | 7..166 | 800 | 100 | Plus |
3L | 28110227 | 3L | 15102254..15102488 | 2135..2370 | 690 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15104753..15106106 | 1052..2405 | 6770 | 100 | Plus |
3L | 28103327 | 3L | 15104185..15104688 | 548..1051 | 2520 | 100 | Plus |
3L | 28103327 | 3L | 15101846..15102059 | 166..379 | 1070 | 100 | Plus |
3L | 28103327 | 3L | 15103916..15104086 | 379..549 | 855 | 100 | Plus |
3L | 28103327 | 3L | 15099009..15099168 | 7..166 | 800 | 100 | Plus |
3L | 28103327 | 3L | 15095419..15095588 | 2204..2370 | 555 | 89.4 | Plus |
3L | 28103327 | 3L | 15095354..15095423 | 2135..2204 | 245 | 90 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15095974..15096139 | 1..166 | 97 | -> | Plus |
chr3L | 15098835..15099046 | 167..378 | 100 | -> | Plus |
chr3L | 15100899..15101069 | 379..549 | 100 | -> | Plus |
chr3L | 15101170..15101671 | 550..1051 | 99 | -> | Plus |
chr3L | 15101736..15103085 | 1052..2402 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RB | 1..1872 | 225..2096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RB | 1..1872 | 225..2096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RB | 1..1872 | 225..2096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RB | 1..1872 | 225..2096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RB | 1..1872 | 225..2096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RB | 20..2397 | 1..2378 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RB | 20..2397 | 1..2378 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RB | 22..190 | 1..168 | 96 | -> | Plus |
CTPsyn-RB | 321..2554 | 169..2402 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6854-RB | 20..2397 | 1..2378 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CTPsyn-RB | 22..2423 | 1..2402 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15105903..15106068 | 1..166 | 97 | -> | Plus |
3L | 15108747..15108958 | 167..378 | 100 | -> | Plus |
3L | 15110816..15110986 | 379..549 | 100 | -> | Plus |
3L | 15111087..15111588 | 550..1051 | 100 | -> | Plus |
3L | 15111653..15113003 | 1052..2402 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15105903..15106068 | 1..166 | 97 | -> | Plus |
3L | 15108747..15108958 | 167..378 | 100 | -> | Plus |
3L | 15110816..15110986 | 379..549 | 100 | -> | Plus |
3L | 15111087..15111588 | 550..1051 | 100 | -> | Plus |
3L | 15111653..15113003 | 1052..2402 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15105903..15106068 | 1..166 | 97 | -> | Plus |
3L | 15108747..15108958 | 167..378 | 100 | -> | Plus |
3L | 15110816..15110986 | 379..549 | 100 | -> | Plus |
3L | 15111087..15111588 | 550..1051 | 100 | -> | Plus |
3L | 15111653..15113003 | 1052..2402 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15104753..15106103 | 1052..2402 | 100 | Plus | |
arm_3L | 15099003..15099168 | 1..166 | 97 | -> | Plus |
arm_3L | 15101847..15102058 | 167..378 | 100 | -> | Plus |
arm_3L | 15103916..15104086 | 379..549 | 100 | -> | Plus |
arm_3L | 15104187..15104688 | 550..1051 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15104187..15104688 | 550..1051 | 100 | -> | Plus |
3L | 15101847..15102058 | 167..378 | 100 | -> | Plus |
3L | 15103916..15104086 | 379..549 | 100 | -> | Plus |
3L | 15104753..15106103 | 1052..2402 | 100 | Plus | |
3L | 15099003..15099168 | 1..166 | 97 | -> | Plus |
Translation from 224 to 2095
> LD27537.pep MAPKKSTIVLNVEQFIHDIEERPAIWNRNFHCNKAFLEQMWDELSGAHKL PSEVYVLDDGAEVDLDLGNYERFLDVTLHRDNNITTGKIYKLVIEKERTG EYLGKTVQVVPHITDAIQEWVERVAQTPVQGSSKPQVCIVELGGTIGDIE GMPFVEAFRQFQFRVKRENFCLAHVSLVPLPKATGEPKTKPTQSSVRELR GCGLSPDLIVCRSEKPIGLEVKEKISNFCHVGPDQVICIHDLNSIYHVPL LMEQNGVIEYLNERLQLNIDMSKRTKCLQQWRDLARRTETVRREVCIAVV GKYTKFTDSYASVVKALQHAALAVNRKLELVFIESCLLEEETLHSEPSKY HKEWQKLCDSHGILVPGGFGSRGMEGKIRACQWARENQKPLLGICLGLQA AVIEFARNKLGLKDANTTEIDPNTANALVIDMPEHHTGQLGGTMRLGKRI TVFSDGPSVIRQLYGNPKSVQERHRHRYEVNPKYVHLLEEQGMRFVGTDV DKTRMEIIELSGHPYFVATQYHPEYLSRPLKPSPPFLGLILASVDRLNQY IQRGCRLSPRQLSDASSDEEDSVVGLAGATKSLSSLKIPITPTNGISKSC NGSISTSDSEGACGGVDPTNGHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23684-PA | 1010 | GF23684-PA | 437..1010 | 50..623 | 2862 | 92.2 | Plus |
Dana\GF23684-PA | 1010 | GF23684-PA | 1..54 | 1..54 | 290 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15718-PA | 580 | GG15718-PA | 13..580 | 53..620 | 2854 | 93.7 | Plus |
Dere\GG15717-PA | 430 | GG15717-PA | 1..51 | 1..51 | 293 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14829-PA | 678 | GH14829-PA | 1..676 | 1..616 | 2604 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CTPsyn-PB | 623 | CG45070-PB | 1..623 | 1..623 | 3275 | 100 | Plus |
CTPsyn-PC | 627 | CG45070-PC | 57..627 | 53..623 | 2991 | 100 | Plus |
CTPsyn-PA | 627 | CG45070-PA | 57..627 | 53..623 | 2991 | 100 | Plus |
CG45071-PB | 379 | CG45071-PB | 1..53 | 1..53 | 283 | 96.2 | Plus |
CG45071-PA | 429 | CG45071-PA | 1..54 | 1..54 | 281 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13933-PA | 689 | GI13933-PA | 1..685 | 1..615 | 2689 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24720-PA | 928 | GL24720-PA | 341..921 | 53..622 | 2715 | 88.7 | Plus |
Dper\GL24720-PA | 928 | GL24720-PA | 1..54 | 1..54 | 291 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23623-PA | 690 | GA23623-PA | 1..683 | 1..622 | 2938 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25505-PA | 585 | GM25505-PA | 4..584 | 52..622 | 2903 | 94.1 | Plus |
Dsec\GM25504-PA | 429 | GM25504-PA | 1..51 | 1..51 | 294 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14523-PA | 1013 | GD14523-PA | 414..1012 | 34..622 | 2920 | 91.8 | Plus |
Dsim\GD14523-PA | 1013 | GD14523-PA | 1..54 | 1..54 | 290 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13723-PA | 665 | GJ13723-PA | 1..663 | 1..616 | 2726 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17769-PA | 738 | GK17769-PA | 165..730 | 53..621 | 2632 | 87.1 | Plus |
Translation from 224 to 2095
> LD27537.hyp MAPKKSTIVLNVEQFIHDIEERPAIWNRNFHCNKAFLEQMWDELSGAHKL PSEVYVLDDGAEVDLDLGNYERFLDVTLHRDNNITTGKIYKLVIEKERTG EYLGKTVQVVPHITDAIQEWVERVAQTPVQGSSKPQVCIVELGGTIGDIE GMPFVEAFRQFQFRVKRENFCLAHVSLVPLPKATGEPKTKPTQSSVRELR GCGLSPDLIVCRSEKPIGLEVKEKISNFCHVGPDQVICIHDLNSIYHVPL LMEQNGVIEYLNERLQLNIDMSKRTKCLQQWRDLARRTETVRREVCIAVV GKYTKFTDSYASVVKALQHAALAVNRKLELVFIESCLLEEETLHSEPSKY HKEWQKLCDSHGILVPGGFGSRGMEGKIRACQWARENQKPLLGICLGLQA AVIEFARNKLGLKDANTTEIDPNTANALVIDMPEHHTGQLGGTMRLGKRI TVFSDGPSVIRQLYGNPKSVQERHRHRYEVNPKYVHLLEEQGMRFVGTDV DKTRMEIIELSGHPYFVATQYHPEYLSRPLKPSPPFLGLILASVDRLNQY IQRGCRLSPRQLSDASSDEEDSVVGLAGATKSLSSLKIPITPTNGISKSC NGSISTSDSEGACGGVDPTNGHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CTPsyn-PB | 623 | CG45070-PB | 1..623 | 1..623 | 3275 | 100 | Plus |
CTPsyn-PC | 627 | CG45070-PC | 57..627 | 53..623 | 2991 | 100 | Plus |
CTPsyn-PA | 627 | CG45070-PA | 57..627 | 53..623 | 2991 | 100 | Plus |
CG45071-PB | 379 | CG45071-PB | 1..53 | 1..53 | 283 | 96.2 | Plus |
CG45071-PA | 429 | CG45071-PA | 1..54 | 1..54 | 281 | 96.3 | Plus |