Clone LD27553 Report

Search the DGRC for LD27553

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:275
Well:53
Vector:pOT2
Associated Gene/TranscriptCG2678-RA
Protein status:LD27553.pep: gold
Preliminary Size:1861
Sequenced Size:1775

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2678 2001-01-01 Release 2 assignment
CG2678 2001-11-29 Blastp of sequenced clone
CG2678 2003-01-01 Sim4 clustering to Release 3
CG2678 2008-04-29 Release 5.5 accounting
CG2678 2008-08-15 Release 5.9 accounting
CG2678 2008-12-18 5.12 accounting

Clone Sequence Records

LD27553.complete Sequence

1775 bp (1775 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069549

> LD27553.complete
AAATCAATTGAACTCTTTAAAAAATGTGCCGTTTATTCATATAATTTACC
AGCAATAACTGTAAAACCAGCGAAACGGGATTATTAGTTTGCAAAACAAG
GCCAATGTCAATGGTCAATTCATAAGATGTCGTAAACTGTTCTTTTATTA
AAAAACATTGCATTTGGTTGTTGATTTAGATGATGCACAGCGCGAAGAAC
GTGTGCCGGACTTGTATGGACGAGACCGGCACCCTGGTAGATATATTCGC
CAATGTAAGGGATCCTGTGCTCGACGAACCGGAGATGAGCCTCTCGCACA
TCCTGGCCAGGTGTACCGAACGTCCAGTGAAACGCGGCGACCTGCTGCCG
CAGTTCATATGCGTTTCCTGCGTCCTGGCCGTGCAGAATGCTTTCCGGTT
CAAGTGGCAAAGCGAGCAGAGCTACCAGCACTTCTTCCGCGTCCTAAACC
AGTCGGGTGCTCCGGAAAACCAAGTGCACTTAGCTGCATGTAATGGGGAT
AAGAACCAGATAATAAACCAGAAAATGCAGCTCAAAAGCGATCGTCAACA
GGATACGCAGCAAATGACAAAAACGCAGAAACCAGATGATGATCTTAGTC
AAAAACAAACACTCCAAGCGAAGCTCCAAGAGGGAAATATTGATGGCCCA
CCGGAGTCCTTCACCCTGCATCCTCGTAAGCGGACTTGTCGCACAGAAGA
ACAGGCAGACATGATCCCAAAGGAAGCTACAAGAAGTACCAAAATGATCT
GCGATGCCGATGGCTACTACAACTGCCCGCACTGTTCTAAGCGATTTTGT
TCCCAGACCCAGTTAAGGACCCACATCACCGATCTGTGCAACAGGTGTCC
CTACTGCCCACGCACTTATATGCAAAAATCGAACCTCAAGCGGCATTTGC
GAAACCACCTAAGCAAGCCAGCGCACAAGTGTTTCCACTGCTCGAAGGCT
TTCATGCGTAAAGATCACCTTAAAAGGCACCTGCGCACCCACGACAGTGA
CGGTCCGCTCTCCTGCAGCCAGTGCTCAGCGGTATTTATCGAACACGTTC
AGCTGGAAATCCATCGCAGAGAGCACAAACAAAGGCCGGGCTCTTCAAAA
TCGGAGTCCACGAAGGATCCTGACTCGGACGACAGCGATCAAGCGCAGGA
TCTAAAACCAAAGTGGACTAAGAACACCTTCAATGGCACGTGCAGCATTC
CACCTATGCTAAAGCCGAAACCGATATGCGATATTTGCCAAAAGAAGTTC
AGTAGTGTCTACGCCTTGAAGCGGCATATGCTTACTCACAATCGCCAACA
TCATCTTAAAAAATGTACCTATTGTTCCGAGGAGTTCAAAACAGAAAAAC
ATCTCAAAAGGCACGAGCGTGGTCACATGGGAGATCTGTTTCGTTGCGAA
TTTTGCTCATTGGTATTTGTAGATGTTAACTACTTGCGAAAGCACAAAAA
ACGCATTCACAGCAACAACGTAATAGCGATGTAGGAGAAGATCATGTCCA
AACGGGTGACTACCGGTTATACTCTTGGAAAACAACCATTGAATTAAGCA
GATTAATATATGTGAAAGGAATATAAACGATTTATTATTCATTATAATTA
TAATGACCGCAGGTCTAAACTTCTGTTGTTGATTCTTACTTTGAATTTTC
TTAAATATGATTCTTTTGTTACTTTCATAAGCTCAAAATTAATATTATTT
AAGTTTCGTTTTAATTATATATTTCACAGAAACTCAAATATACTGAGAAT
AAGCTCTAAAAAAAAAAAAAAAAAA

LD27553.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:51:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG2678-RA 1971 CG2678-RA 135..1894 1..1760 8800 100 Plus
CG2678.b 1650 CG2678.b 69..1650 179..1760 7910 100 Plus
CG2678.a 1777 CG2678.a 49..1234 1..1186 5930 100 Plus
CG2678.a 1777 CG2678.a 1234..1777 1217..1760 2720 100 Plus
CG2678-RA 1971 CG2678-RA 1883..1934 1677..1728 170 88.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 3739941..3740673 1..733 3665 100 Plus
chr3R 27901430 chr3R 3741949..3742489 1217..1757 2705 100 Plus
chr3R 27901430 chr3R 3740826..3741311 732..1217 2430 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:19:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:58:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7913905..7914637 1..733 3665 100 Plus
3R 32079331 3R 7915913..7916456 1217..1760 2720 100 Plus
3R 32079331 3R 7914790..7915275 732..1217 2430 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:17:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 7654736..7655468 1..733 3665 100 Plus
3R 31820162 3R 7656744..7657287 1217..1760 2720 100 Plus
3R 31820162 3R 7655621..7656106 732..1217 2430 100 Plus
3R 31820162 3R 7657276..7657327 1677..1728 170 88.4 Plus
Blast to na_te.dros performed 2019-03-16 00:58:57
Subject Length Description Subject Range Query Range Score Percent Strand
S2 1735 S2 S2 1735bp 1571..1653 86..1 116 62.8 Minus

LD27553.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:00:04 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 3739941..3740673 1..733 100 -> Plus
chr3R 3740828..3741310 734..1216 100 -> Plus
chr3R 3741949..3742489 1217..1757 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:06:53 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 1..1305 180..1484 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:20:56 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 1..1305 180..1484 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:00:24 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 1..1305 180..1484 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:47:15 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 1..1305 180..1484 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:18:15 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 1..1305 180..1484 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:55:02 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 49..1805 1..1757 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:20:56 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 49..1805 1..1757 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:00:24 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 55..1811 1..1757 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:47:15 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 49..1805 1..1757 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:18:15 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
CG2678-RA 55..1811 1..1757 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:04 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7913905..7914637 1..733 100 -> Plus
3R 7914792..7915274 734..1216 100 -> Plus
3R 7915913..7916453 1217..1757 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:04 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7913905..7914637 1..733 100 -> Plus
3R 7914792..7915274 734..1216 100 -> Plus
3R 7915913..7916453 1217..1757 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:00:04 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7913905..7914637 1..733 100 -> Plus
3R 7914792..7915274 734..1216 100 -> Plus
3R 7915913..7916453 1217..1757 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:00:24 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3739627..3740359 1..733 100 -> Plus
arm_3R 3740514..3740996 734..1216 100 -> Plus
arm_3R 3741635..3742175 1217..1757 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:23:39 Download gff for LD27553.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7654736..7655468 1..733 100 -> Plus
3R 7655623..7656105 734..1216 100 -> Plus
3R 7656744..7657284 1217..1757 100   Plus

LD27553.pep Sequence

Translation from 179 to 1483

> LD27553.pep
MMHSAKNVCRTCMDETGTLVDIFANVRDPVLDEPEMSLSHILARCTERPV
KRGDLLPQFICVSCVLAVQNAFRFKWQSEQSYQHFFRVLNQSGAPENQVH
LAACNGDKNQIINQKMQLKSDRQQDTQQMTKTQKPDDDLSQKQTLQAKLQ
EGNIDGPPESFTLHPRKRTCRTEEQADMIPKEATRSTKMICDADGYYNCP
HCSKRFCSQTQLRTHITDLCNRCPYCPRTYMQKSNLKRHLRNHLSKPAHK
CFHCSKAFMRKDHLKRHLRTHDSDGPLSCSQCSAVFIEHVQLEIHRREHK
QRPGSSKSESTKDPDSDDSDQAQDLKPKWTKNTFNGTCSIPPMLKPKPIC
DICQKKFSSVYALKRHMLTHNRQHHLKKCTYCSEEFKTEKHLKRHERGHM
GDLFRCEFCSLVFVDVNYLRKHKKRIHSNNVIAM*

LD27553.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20428-PA 883 GF20428-PA 557..750 197..431 239 27.7 Plus
Dana\GF20428-PA 883 GF20428-PA 460..633 221..425 232 33.5 Plus
Dana\GF23400-PA 940 GF23400-PA 433..705 159..432 230 27.3 Plus
Dana\GF17155-PA 388 GF17155-PA 4..372 8..422 225 24.8 Plus
Dana\GF10403-PA 578 GF10403-PA 280..511 161..424 224 27.5 Plus
Dana\GF20119-PA 304 GF20119-PA 2..295 4..310 215 27.5 Plus
Dana\GF23400-PA 940 GF23400-PA 303..525 192..425 209 27.2 Plus
Dana\GF23400-PA 940 GF23400-PA 377..614 159..430 208 26 Plus
Dana\GF23400-PA 940 GF23400-PA 254..498 170..422 196 26.3 Plus
Dana\GF23400-PA 940 GF23400-PA 252..470 197..422 190 25.4 Plus
Dana\GF23400-PA 940 GF23400-PA 349..557 159..430 184 26.1 Plus
Dana\GF10403-PA 578 GF10403-PA 377..571 197..399 182 28 Plus
Dana\GF20428-PA 883 GF20428-PA 36..223 8..242 153 26.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14285-PA 456 GG14285-PA 1..430 1..431 1505 67.4 Plus
Dere\GG13746-PA 574 GG13746-PA 13..455 9..429 287 23.9 Plus
Dere\GG20118-PA 556 GG20118-PA 4..469 8..429 272 25.5 Plus
Dere\GG13562-PA 298 GG13562-PA 5..298 8..301 270 26.5 Plus
Dere\GG13743-PA 341 GG13743-PA 1..323 2..295 261 28.1 Plus
Dere\GG13746-PA 574 GG13746-PA 291..509 197..424 199 26.5 Plus
Dere\GG13746-PA 574 GG13746-PA 372..570 194..399 197 31 Plus
Dere\GG20118-PA 556 GG20118-PA 389..555 197..403 191 28.3 Plus
Dere\GG13743-PA 341 GG13743-PA 222..299 222..299 153 35.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:26:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13680-PA 384 GH13680-PA 2..375 6..422 368 27.9 Plus
Dgri\GH10681-PA 355 GH10681-PA 2..346 6..422 361 28.3 Plus
Dgri\GH13049-PA 345 GH13049-PA 4..336 8..402 293 26 Plus
Dgri\GH18569-PA 479 GH18569-PA 4..440 8..431 290 24.9 Plus
Dgri\GH10788-PA 338 GH10788-PA 92..288 197..429 233 27.8 Plus
Dgri\GH10788-PA 338 GH10788-PA 118..234 192..303 193 36.8 Plus
Dgri\GH10788-PA 338 GH10788-PA 41..253 171..422 160 23.6 Plus
Dgri\GH13680-PA 384 GH13680-PA 273..381 197..301 154 32.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG2678-PA 434 CG2678-PA 1..434 1..434 2381 100 Plus
CG2678-PB 346 CG2678-PB 1..346 1..346 1891 100 Plus
CG15436-PA 346 CG15436-PA 4..340 8..395 366 26.6 Plus
Meics-PB 571 CG8474-PB 21..451 9..428 343 24.2 Plus
Meics-PA 583 CG8474-PA 21..522 9..429 327 24.7 Plus
crol-PD 878 CG14938-PD 346..641 159..427 308 28.7 Plus
crol-PG 878 CG14938-PG 302..527 194..430 304 30.2 Plus
crol-PB 891 CG14938-PB 346..611 159..430 299 27.7 Plus
crol-PI 962 CG14938-PI 346..611 159..430 299 27.7 Plus
crol-PE 962 CG14938-PE 346..611 159..430 299 27.7 Plus
crol-PA 962 CG14938-PA 346..611 159..430 299 27.7 Plus
crol-PG 878 CG14938-PG 346..641 159..427 295 27.4 Plus
crol-PB 891 CG14938-PB 374..639 159..430 293 27 Plus
crol-PI 962 CG14938-PI 374..639 159..430 293 27 Plus
crol-PE 962 CG14938-PE 374..639 159..430 293 27 Plus
crol-PA 962 CG14938-PA 374..639 159..430 293 27 Plus
crol-PF 907 CG14938-PF 346..670 159..427 292 27.4 Plus
crol-PI 962 CG14938-PI 430..725 159..427 290 27.4 Plus
crol-PE 962 CG14938-PE 430..725 159..427 290 27.4 Plus
crol-PA 962 CG14938-PA 430..725 159..427 290 27.4 Plus
crol-PC 756 CG14938-PC 224..519 159..427 290 27.4 Plus
CG5245-PA 501 CG5245-PA 85..294 172..422 288 29.4 Plus
crol-PG 878 CG14938-PG 333..555 197..430 286 27.7 Plus
CG5245-PA 501 CG5245-PA 221..434 197..422 286 30.8 Plus
crol-PC 756 CG14938-PC 180..433 171..430 286 27.1 Plus
CG44002-PA 345 CG44002-PA 2..306 6..299 285 26.5 Plus
crol-PH 686 CG14938-PH 180..434 171..430 285 27 Plus
CG2202-PA 889 CG2202-PA 571..764 197..431 285 27.7 Plus
CG17359-PA 339 CG17359-PA 6..334 8..312 284 26.5 Plus
crol-PF 907 CG14938-PF 302..527 194..430 278 28.6 Plus
CG15436-PA 346 CG15436-PA 126..313 197..423 276 27.9 Plus
CG8319-PA 383 CG8319-PA 2..375 6..402 276 23.7 Plus
crol-PG 878 CG14938-PG 277..498 197..430 275 28.9 Plus
crol-PB 891 CG14938-PB 302..523 194..422 274 28.5 Plus
crol-PI 962 CG14938-PI 302..523 194..422 274 28.5 Plus
crol-PE 962 CG14938-PE 302..523 194..422 274 28.5 Plus
crol-PA 962 CG14938-PA 302..523 194..422 274 28.5 Plus
CG5245-PA 501 CG5245-PA 77..378 122..422 273 24.8 Plus
crol-PD 878 CG14938-PD 302..527 194..430 272 28.6 Plus
CG2202-PA 889 CG2202-PA 474..647 221..425 269 32 Plus
Neu2-PA 382 CG7204-PA 10..377 33..403 266 25.8 Plus
crol-PD 878 CG14938-PD 333..555 197..430 263 27.7 Plus
CG5245-PA 501 CG5245-PA 276..493 197..425 262 26.5 Plus
crol-PD 878 CG14938-PD 277..498 197..430 258 27.7 Plus
Kr-h1-PA 791 CG45074-PA 217..413 197..403 250 31.1 Plus
Kr-h1-PB 845 CG45074-PB 271..467 197..403 250 31.1 Plus
Meics-PB 571 CG8474-PB 372..567 197..399 249 30.9 Plus
Meics-PA 583 CG8474-PA 384..579 197..399 249 30.9 Plus
crol-PF 907 CG14938-PF 277..468 197..422 248 26 Plus
Neu2-PB 308 CG7204-PB 10..293 33..312 248 26.7 Plus
CG42726-PA 441 CG42726-PA 41..293 170..427 248 27.6 Plus
crol-PH 686 CG14938-PH 258..479 164..414 245 24.2 Plus
CG3281-PA 538 CG3281-PA 11..426 5..425 244 22.5 Plus
crol-PD 878 CG14938-PD 249..466 197..425 242 25.7 Plus
prg-PB 558 CG9233-PB 257..488 188..424 242 26.3 Plus
prg-PA 558 CG9233-PA 257..488 188..424 242 26.3 Plus
CG17612-PA 618 CG17612-PA 187..584 9..422 242 22.8 Plus
CG17612-PB 618 CG17612-PB 187..584 9..422 242 22.8 Plus
CG12299-PA 736 CG12299-PA 254..446 197..428 237 27.4 Plus
crol-PB 891 CG14938-PB 249..466 197..425 236 25.2 Plus
crol-PI 962 CG14938-PI 249..466 197..425 236 25.2 Plus
crol-PE 962 CG14938-PE 249..466 197..425 236 25.2 Plus
crol-PA 962 CG14938-PA 249..466 197..425 236 25.2 Plus
Oaz-PB 1228 CG17390-PB 151..410 194..431 235 25.7 Plus
Oaz-PC 1366 CG42702-PC 289..548 194..431 235 25.7 Plus
su(Hw)-PC 941 CG8573-PC 348..571 197..422 234 29.6 Plus
su(Hw)-PB 941 CG8573-PB 348..571 197..422 234 29.6 Plus
su(Hw)-PA 941 CG8573-PA 348..571 197..422 234 29.6 Plus
trem-PA 439 CG4413-PA 11..409 8..373 233 22.5 Plus
CG6654-PA 639 CG6654-PA 381..598 195..422 227 24.3 Plus
CG32772-PE 520 CG32772-PE 65..350 126..425 226 23.1 Plus
CG32772-PC 520 CG32772-PC 65..350 126..425 226 23.1 Plus
crol-PB 891 CG14938-PB 486..641 159..303 225 32.1 Plus
crol-PH 686 CG14938-PH 281..436 159..303 225 32.1 Plus
CG4360-PB 385 CG4360-PB 143..358 222..424 225 25.7 Plus
CG4360-PA 556 CG4360-PA 143..358 222..424 225 25.7 Plus
CG4282-PA 652 CG4282-PA 383..619 196..427 224 25.5 Plus
pita-PB 623 CG3941-PB 222..442 193..422 222 27.8 Plus
pita-PA 683 CG3941-PA 282..502 193..422 222 27.8 Plus
CG15436-PA 346 CG15436-PA 128..288 223..427 221 26.1 Plus
CG15269-PA 587 CG15269-PA 357..521 199..381 220 29.9 Plus
CTCF-PA 818 CG8591-PA 282..492 186..431 219 25 Plus
Neu2-PA 382 CG7204-PA 116..279 246..425 218 32.2 Plus
Neu2-PB 308 CG7204-PB 116..279 246..425 218 32.2 Plus
CG17328-PA 413 CG17328-PA 1..344 1..376 218 23.2 Plus
dwg-PA 592 CG2711-PA 228..524 86..428 216 22.8 Plus
CG11247-PC 522 CG11247-PC 92..374 196..427 215 22.9 Plus
CG11247-PA 522 CG11247-PA 92..374 196..427 215 22.9 Plus
CG11247-PB 522 CG11247-PB 92..374 196..427 215 22.9 Plus
CG5245-PA 501 CG5245-PA 63..239 228..422 213 29.6 Plus
CG5245-PA 501 CG5245-PA 325..466 163..299 209 31.7 Plus
crol-PB 891 CG14938-PB 519..664 164..299 202 30.8 Plus
pita-PB 623 CG3941-PB 338..497 197..395 200 27.3 Plus
pita-PA 683 CG3941-PA 398..557 197..395 200 27.3 Plus
su(Hw)-PC 941 CG8573-PC 278..517 207..424 198 26 Plus
su(Hw)-PB 941 CG8573-PB 278..517 207..424 198 26 Plus
su(Hw)-PA 941 CG8573-PA 278..517 207..424 198 26 Plus
crol-PG 878 CG14938-PG 220..411 214..422 192 26.7 Plus
su(Hw)-PC 941 CG8573-PC 441..617 197..369 190 28.3 Plus
su(Hw)-PB 941 CG8573-PB 441..617 197..369 190 28.3 Plus
su(Hw)-PA 941 CG8573-PA 441..617 197..369 190 28.3 Plus
CG15269-PA 587 CG15269-PA 291..485 214..422 187 26.4 Plus
crol-PD 878 CG14938-PD 220..410 214..425 183 25.5 Plus
crol-PF 907 CG14938-PF 220..407 214..422 180 25.4 Plus
trem-PA 439 CG4413-PA 300..426 197..326 178 29.1 Plus
CG32772-PE 520 CG32772-PE 70..377 103..395 175 22.2 Plus
CG32772-PC 520 CG32772-PC 70..377 103..395 175 22.2 Plus
CG8319-PA 383 CG8319-PA 263..379 194..307 171 31.4 Plus
crol-PB 891 CG14938-PB 220..413 214..429 166 24.5 Plus
crol-PI 962 CG14938-PI 220..413 214..429 166 24.5 Plus
crol-PE 962 CG14938-PE 220..413 214..429 166 24.5 Plus
crol-PA 962 CG14938-PA 220..413 214..429 166 24.5 Plus
CG15269-PA 587 CG15269-PA 383..489 197..299 159 29 Plus
dwg-PA 592 CG2711-PA 405..525 185..301 155 29.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:26:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17965-PA 403 GI17965-PA 2..396 6..422 349 26 Plus
Dmoj\GI11127-PA 384 GI11127-PA 4..382 8..428 328 29.1 Plus
Dmoj\GI13598-PA 345 GI13598-PA 5..333 9..402 291 25.4 Plus
Dmoj\GI11721-PA 343 GI11721-PA 3..293 8..299 245 28.2 Plus
Dmoj\GI14828-PA 1155 GI14828-PA 829..1022 197..431 239 26.9 Plus
Dmoj\GI14828-PA 1155 GI14828-PA 732..905 221..425 236 32.5 Plus
Dmoj\GI17965-PA 403 GI17965-PA 294..402 197..301 161 33 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26275-PA 880 GL26275-PA 273..693 6..430 332 26.2 Plus
Dper\GL20492-PA 419 GL20492-PA 2..364 6..413 296 26.7 Plus
Dper\GL17891-PA 464 GL17891-PA 15..346 7..303 291 28.8 Plus
Dper\GL20485-PA 318 GL20485-PA 1..309 13..323 282 27.6 Plus
Dper\GL15688-PA 533 GL15688-PA 8..441 4..422 262 24.3 Plus
Dper\GL26275-PA 880 GL26275-PA 5..269 38..286 248 27 Plus
Dper\GL20492-PA 419 GL20492-PA 130..345 197..422 242 30.9 Plus
Dper\GL26275-PA 880 GL26275-PA 605..819 192..422 232 31.5 Plus
Dper\GL26275-PA 880 GL26275-PA 711..848 161..296 191 33.6 Plus
Dper\GL26275-PA 880 GL26275-PA 664..880 193..419 189 27.1 Plus
Dper\GL15688-PA 533 GL15688-PA 339..513 197..372 174 29.5 Plus
Dper\GL15688-PA 533 GL15688-PA 311..514 197..402 165 28.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:26:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28526-PA 464 GA28526-PA 15..346 7..303 289 28.3 Plus
Dpse\GA26117-PA 423 GA26117-PA 1..414 13..422 268 25.6 Plus
Dpse\GA25534-PA 412 GA25534-PA 4..379 8..387 266 27.6 Plus
Dpse\GA25545-PB 362 GA25545-PB 69..360 141..430 255 28.4 Plus
Dpse\GA25549-PA 308 GA25549-PA 4..306 8..286 250 28.9 Plus
Dpse\GA26117-PA 423 GA26117-PA 256..418 197..399 186 29.3 Plus
Dpse\GA25549-PA 308 GA25549-PA 131..287 223..422 182 28.7 Plus
Dpse\GA25534-PA 412 GA25534-PA 129..304 222..422 174 27.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:26:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10985-PA 250 GM10985-PA 1..228 231..433 884 75.9 Plus
Dsec\GM10984-PA 206 GM10984-PA 1..203 1..200 872 81.5 Plus
Dsec\GM18478-PA 345 GM18478-PA 3..339 7..395 293 26.1 Plus
Dsec\GM24571-PA 575 GM24571-PA 13..456 9..429 271 23.2 Plus
Dsec\GM18162-PA 418 GM18162-PA 1..380 19..423 253 24.9 Plus
Dsec\GM18478-PA 345 GM18478-PA 125..312 197..423 209 29.5 Plus
Dsec\GM24571-PA 575 GM24571-PA 279..510 161..424 204 25.7 Plus
Dsec\GM24571-PA 575 GM24571-PA 376..571 197..399 195 31.4 Plus
Dsec\GM18162-PA 418 GM18162-PA 249..411 197..399 165 27.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:26:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19958-PA 483 GD19958-PA 1..462 1..434 1891 78.7 Plus
Dsim\GD12643-PA 575 GD12643-PA 13..456 9..429 274 23 Plus
Dsim\GD22772-PA 392 GD22772-PA 1..358 19..423 258 24.9 Plus
Dsim\GD12116-PA 360 GD12116-PA 10..257 33..303 249 27.9 Plus
Dsim\GD22773-PA 325 GD22773-PA 1..286 19..299 221 24.8 Plus
Dsim\GD12643-PA 575 GD12643-PA 279..510 161..424 202 25.7 Plus
Dsim\GD12643-PA 575 GD12643-PA 376..571 197..399 195 31.4 Plus
Dsim\GD12116-PA 360 GD12116-PA 116..279 246..425 179 34.4 Plus
Dsim\GD22772-PA 392 GD22772-PA 227..389 197..399 170 27.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:26:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16305-PA 405 GJ16305-PA 2..396 6..422 362 27.7 Plus
Dvir\GJ18319-PA 411 GJ18319-PA 4..409 8..428 308 29.1 Plus
Dvir\GJ13935-PA 362 GJ13935-PA 4..343 8..399 302 25.9 Plus
Dvir\GJ11385-PA 430 GJ11385-PA 3..410 7..422 297 27.3 Plus
Dvir\GJ11512-PA 511 GJ11512-PA 2..353 6..402 273 25.1 Plus
Dvir\GJ18319-PA 411 GJ18319-PA 155..354 217..429 204 27.1 Plus
Dvir\GJ11512-PA 511 GJ11512-PA 244..508 197..422 167 24.9 Plus
Dvir\GJ16305-PA 405 GJ16305-PA 322..400 197..271 162 41.8 Plus
Dvir\GJ16305-PA 405 GJ16305-PA 294..402 197..301 158 31.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:26:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13252-PA 418 GK13252-PA 10..401 6..431 322 28.2 Plus
Dwil\GK18485-PA 331 GK18485-PA 1..293 8..296 255 27.4 Plus
Dwil\GK12031-PA 273 GK12031-PA 6..252 4..312 252 28.6 Plus
Dwil\GK16454-PA 881 GK16454-PA 537..730 197..431 236 27.7 Plus
Dwil\GK14973-PA 1011 GK14973-PA 383..619 159..430 232 27.7 Plus
Dwil\GK14973-PA 1011 GK14973-PA 309..532 192..422 225 29.1 Plus
Dwil\GK16454-PA 881 GK16454-PA 441..613 221..425 223 32.5 Plus
Dwil\GK14973-PA 1011 GK14973-PA 495..767 159..432 223 26.6 Plus
Dwil\GK14973-PA 1011 GK14973-PA 439..676 159..430 218 26.7 Plus
Dwil\GK14973-PA 1011 GK14973-PA 258..476 197..422 189 25.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:26:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24954-PA 456 GE24954-PA 1..430 1..434 1713 74.3 Plus
Dyak\GE18294-PA 346 GE18294-PA 2..342 6..399 314 25.2 Plus
Dyak\GE20043-PA 573 GE20043-PA 13..455 9..429 293 23.2 Plus
Dyak\GE18295-PA 346 GE18295-PA 4..340 8..395 281 25.1 Plus
Dyak\GE17974-PA 438 GE17974-PA 1..425 19..424 268 25.7 Plus
Dyak\GE18295-PA 346 GE18295-PA 126..319 197..430 226 28.7 Plus
Dyak\GE20043-PA 573 GE20043-PA 278..539 161..422 219 27.7 Plus
Dyak\GE20043-PA 573 GE20043-PA 372..570 194..399 204 31.9 Plus
Dyak\GE20043-PA 573 GE20043-PA 291..509 197..424 201 26.9 Plus

LD27553.hyp Sequence

Translation from 179 to 1483

> LD27553.hyp
MMHSAKNVCRTCMDETGTLVDIFANVRDPVLDEPEMSLSHILARCTERPV
KRGDLLPQFICVSCVLAVQNAFRFKWQSEQSYQHFFRVLNQSGAPENQVH
LAACNGDKNQIINQKMQLKSDRQQDTQQMTKTQKPDDDLSQKQTLQAKLQ
EGNIDGPPESFTLHPRKRTCRTEEQADMIPKEATRSTKMICDADGYYNCP
HCSKRFCSQTQLRTHITDLCNRCPYCPRTYMQKSNLKRHLRNHLSKPAHK
CFHCSKAFMRKDHLKRHLRTHDSDGPLSCSQCSAVFIEHVQLEIHRREHK
QRPGSSKSESTKDPDSDDSDQAQDLKPKWTKNTFNGTCSIPPMLKPKPIC
DICQKKFSSVYALKRHMLTHNRQHHLKKCTYCSEEFKTEKHLKRHERGHM
GDLFRCEFCSLVFVDVNYLRKHKKRIHSNNVIAM*

LD27553.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:24:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG2678-PA 434 CG2678-PA 1..434 1..434 2381 100 Plus
CG2678-PB 346 CG2678-PB 1..346 1..346 1891 100 Plus
CG15436-PA 346 CG15436-PA 4..340 8..395 366 26.6 Plus
Meics-PB 571 CG8474-PB 21..451 9..428 343 24.2 Plus
crol-PD 878 CG14938-PD 346..641 159..427 308 28.7 Plus
CG15436-PA 346 CG15436-PA 126..313 197..423 276 27.9 Plus
Meics-PB 571 CG8474-PB 372..567 197..399 249 30.9 Plus
CG15436-PA 346 CG15436-PA 128..288 223..427 221 26.1 Plus