BDGP Sequence Production Resources |
Search the DGRC for LD27564
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 275 |
Well: | 64 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9986-RA |
Protein status: | LD27564.pep: gold |
Preliminary Size: | 1984 |
Sequenced Size: | 2138 |
Gene | Date | Evidence |
---|---|---|
CG9986 | 2001-01-01 | Release 2 assignment |
CG9986 | 2001-11-29 | Blastp of sequenced clone |
CG9986 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9986 | 2008-04-29 | Release 5.5 accounting |
CG9986 | 2008-08-15 | Release 5.9 accounting |
CG9986 | 2008-12-18 | 5.12 accounting |
2138 bp (2138 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069550
> LD27564.complete TAACTAACTAAAACACCGACTAAGGACCTCTGAAATGGACTCTACTGCCA CTCGCACGCTGCCCTTTGTGTACAAGTATAAAAATCATAAAGGCCAAGAC TGCGAATCCCGGCTGGACATCACTTTTCCCTTTGACCAGGAAAATCTGGA GGAGTGTATCACCCAGCTGATGGCTCCCAACCAGATGGACCCTATGATGC GGTACCTGGACGAGAATATCAAACTCGAACGGGAGCTGCAGAAATTCGTG GATACGGAGCAGCAAAATTTCCTGGACGACCAAGCCGAAAAGCTACTCAA ACAGGCGGCCAACGAGGAGATGGACATCGAGGCCATTGTGCGGGACACAG AGAGGCTGTACAAGGAGGAACTACTGCAATTTGCCGATCGTGTGGGTCCC AGCGATGCTGACATATTCGCCCAGAGCTTCCATCGCCTGGTGCACTCTTC GTCCCTGGAGGACATACTCAAGCGAGAGCGTGCATATGCCAAGGTGGTGT CCGACATGACCGATCTTATGGACAGCGAGGTGGAGACGTTGAACAACTCT CAGCAGCAGGAAATGGATAGCCAGATAAATCAGTTGGACATCACCACCAC CTCGGAGGATATCAACAATCTGCTGGCGCAGCAGTACACCACGCAGAATT ATGTGCGGAAGCGATACGAATCCGAACTAGAAGCAATGATGGGTCATCAG AAGAATGAGTATCGAAATTGGATCACCAGTCAGGTCAGTCAGATGTTTCA AGTGTCGCCGGTGGCCACGCCGCTGGGTAACCGCTCCTCCATGTTCGTCT CGCAACAGCCCTCCATGGAGGAGAGCTTCACCATTCACCTGGGCTCCCAG CTGAAGCACATGCACAACATACGCATCCTGAGTGCCAATGTCACGGAGCT CTGCAGTCCGCTGCACGCCGAGGAGAGTCTTAATGGCCTTAACATGGCTC TGGGATTGTACTCCAGTTCCCTCTGCGGCGTCGTCGTGCTGACCCCATCG ATTCAGGCCCAGGCCAACAAGAATATCATTAAAAATGCCAACAAGTCCAC CGAGTTTCATTTTGAGCAAATAGACGTTCAGATGGAAAAGATCGAGAAGC AGATTAAGAATTTGACCACTGAAGATTCCAGTGGCAGTAGTACTAGCAAC AGCAGTGCCGAGGGCAGTGGCACACCCTCGCCGACCAAGAAGAGCGTGCC CAGACTGAAAACAGGCGACTTCTTCATCACCAAGCACTCGAATCTCTCGC AAACGCATGTTATTTTTCACCTGATTTCGGACGAACCCATCAACAGTCCC AGTGAGATCAACTCGCGGCATCCAGTGATCTTGGGTTTGCGAAACATCCT AAAGACAGCCAGCAGGCACGACATCACCACGCTGACCATTCCGGCTCTGC TGCGTCACGAGATGAGCGAGGACATGACCGTCCAGTGGTGCATCAGAAGA GCAGAGCTGGTGTTTAAGTGCGCCAAGGGGTTTATGATAGAATCTGCATC TTGGGGCGGAGCTGAGTTAAGCACCTTGCAACTGCTACTGCCTGATGACA TATCGGAAAGTTTGTTCACCACTCTGGCGGGAATGGTTCCCAGCGTTTTT CACGTGGCCAATCCCAAGATACTTGTGGACACCAGCAAGTAGGCCGCGAA AACATTCCTCAAACTTCACTTTGCAAATAGACTTTAAATTATTTGTATGA ATATACAGTTTTATTCAGATTCAGAGTTATATATGTATGTATATGCTTCG TTATTCGTCGCTTCGCTCAAAAAGTTGTTTAAACTTCAACACACTCAGAA TTTTCTGTAAATGTTCCTGTATCAATTTTTGTCAATAATTCATCGCAACC TTTTCAAAACTACAACACTACAATGTATAAGTACATATTCTCATATATAT AGTTATATTTTAGGCATAGGTATCATGTGTGTATATTACTTCCAAATGTA AATGTTTATCTTTGGTTTCGAACCCCCATGCATTTCGTGTTGTGTGTGTA TCTCTGTGGATTGTATTTTAGTCTGTTCGGTTATCTATTACGATTATAAT AATGATACTTTGAATAACTCTGACCATTAACTTGTAAATATGCTTTTGAA ATATATATTTATGTATATCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9986.a | 2387 | CG9986.a | 262..2384 | 1..2123 | 10615 | 100 | Plus |
CG9986-RA | 2387 | CG9986-RA | 262..2384 | 1..2123 | 10615 | 100 | Plus |
CG10011-RA | 8709 | CG10011-RA | 8269..8709 | 2123..1683 | 2205 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 24429474..24430773 | 222..1521 | 6365 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 24430831..24431431 | 1520..2120 | 2990 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 24429197..24429417 | 1..221 | 1060 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 28606411..28607710 | 222..1521 | 6500 | 100 | Plus |
3R | 32079331 | 3R | 28607768..28608371 | 1520..2123 | 3020 | 100 | Plus |
3R | 32079331 | 3R | 28606134..28606354 | 1..221 | 1105 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 28347242..28348541 | 222..1521 | 6500 | 100 | Plus |
3R | 31820162 | 3R | 28348599..28349202 | 1520..2123 | 3020 | 100 | Plus |
3R | 31820162 | 3R | 28346965..28347185 | 1..221 | 1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24429197..24429417 | 1..221 | 98 | -> | Plus |
chr3R | 24429474..24430773 | 222..1521 | 99 | -> | Plus |
chr3R | 24430833..24431431 | 1522..2120 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 1..1608 | 35..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 1..1608 | 35..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 1..1608 | 35..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 1..1608 | 35..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 1..1608 | 35..1642 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 1..2117 | 4..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 1..2117 | 4..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 56..2175 | 1..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 1..2117 | 4..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9986-RA | 56..2175 | 1..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28606134..28606354 | 1..221 | 100 | -> | Plus |
3R | 28606411..28607710 | 222..1521 | 100 | -> | Plus |
3R | 28607770..28608368 | 1522..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28606134..28606354 | 1..221 | 100 | -> | Plus |
3R | 28606411..28607710 | 222..1521 | 100 | -> | Plus |
3R | 28607770..28608368 | 1522..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28606134..28606354 | 1..221 | 100 | -> | Plus |
3R | 28606411..28607710 | 222..1521 | 100 | -> | Plus |
3R | 28607770..28608368 | 1522..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24431856..24432076 | 1..221 | 100 | -> | Plus |
arm_3R | 24432133..24433432 | 222..1521 | 100 | -> | Plus |
arm_3R | 24433492..24434090 | 1522..2120 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28346965..28347185 | 1..221 | 100 | -> | Plus |
3R | 28347242..28348541 | 222..1521 | 100 | -> | Plus |
3R | 28348601..28349199 | 1522..2120 | 100 | Plus |
Translation from 34 to 1641
> LD27564.pep MDSTATRTLPFVYKYKNHKGQDCESRLDITFPFDQENLEECITQLMAPNQ MDPMMRYLDENIKLERELQKFVDTEQQNFLDDQAEKLLKQAANEEMDIEA IVRDTERLYKEELLQFADRVGPSDADIFAQSFHRLVHSSSLEDILKRERA YAKVVSDMTDLMDSEVETLNNSQQQEMDSQINQLDITTTSEDINNLLAQQ YTTQNYVRKRYESELEAMMGHQKNEYRNWITSQVSQMFQVSPVATPLGNR SSMFVSQQPSMEESFTIHLGSQLKHMHNIRILSANVTELCSPLHAEESLN GLNMALGLYSSSLCGVVVLTPSIQAQANKNIIKNANKSTEFHFEQIDVQM EKIEKQIKNLTTEDSSGSSTSNSSAEGSGTPSPTKKSVPRLKTGDFFITK HSNLSQTHVIFHLISDEPINSPSEINSRHPVILGLRNILKTASRHDITTL TIPALLRHEMSEDMTVQWCIRRAELVFKCAKGFMIESASWGGAELSTLQL LLPDDISESLFTTLAGMVPSVFHVANPKILVDTSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18583-PA | 542 | GF18583-PA | 1..542 | 1..535 | 2584 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11604-PA | 535 | GG11604-PA | 1..535 | 1..535 | 2796 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17126-PA | 535 | GH17126-PA | 3..535 | 5..535 | 2386 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9986-PA | 535 | CG9986-PA | 1..535 | 1..535 | 2725 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10578-PA | 538 | GI10578-PA | 3..538 | 6..535 | 2336 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13792-PA | 538 | GL13792-PA | 1..535 | 1..534 | 2563 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22168-PA | 538 | GA22168-PA | 1..535 | 1..534 | 2568 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16386-PA | 515 | GM16386-PA | 1..514 | 1..534 | 2433 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21375-PA | 535 | GD21375-PA | 1..535 | 1..535 | 2835 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22935-PA | 537 | GJ22935-PA | 5..537 | 7..535 | 2373 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12097-PA | 540 | GK12097-PA | 10..535 | 5..532 | 2418 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23792-PA | 536 | GE23792-PA | 1..536 | 1..535 | 2799 | 97.2 | Plus |
Translation from 34 to 1641
> LD27564.hyp MDSTATRTLPFVYKYKNHKGQDCESRLDITFPFDQENLEECITQLMAPNQ MDPMMRYLDENIKLERELQKFVDTEQQNFLDDQAEKLLKQAANEEMDIEA IVRDTERLYKEELLQFADRVGPSDADIFAQSFHRLVHSSSLEDILKRERA YAKVVSDMTDLMDSEVETLNNSQQQEMDSQINQLDITTTSEDINNLLAQQ YTTQNYVRKRYESELEAMMGHQKNEYRNWITSQVSQMFQVSPVATPLGNR SSMFVSQQPSMEESFTIHLGSQLKHMHNIRILSANVTELCSPLHAEESLN GLNMALGLYSSSLCGVVVLTPSIQAQANKNIIKNANKSTEFHFEQIDVQM EKIEKQIKNLTTEDSSGSSTSNSSAEGSGTPSPTKKSVPRLKTGDFFITK HSNLSQTHVIFHLISDEPINSPSEINSRHPVILGLRNILKTASRHDITTL TIPALLRHEMSEDMTVQWCIRRAELVFKCAKGFMIESASWGGAELSTLQL LLPDDISESLFTTLAGMVPSVFHVANPKILVDTSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9986-PA | 535 | CG9986-PA | 1..535 | 1..535 | 2725 | 100 | Plus |