BDGP Sequence Production Resources |
Search the DGRC for LD27619
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 276 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | Naa60-RB |
Protein status: | LD27619.pep: gold |
Sequenced Size: | 2170 |
Gene | Date | Evidence |
---|---|---|
CG18177 | 2002-11-13 | Blastp of sequenced clone |
CG18177 | 2008-04-29 | Release 5.5 accounting |
CG18177 | 2008-08-15 | Release 5.9 accounting |
CG18177 | 2008-12-18 | 5.12 accounting |
2170 bp assembled on 2006-11-09
GenBank Submission: BT001491
> LD27619.complete AGGACAAATGAGGCATCATCGCGGGCCAACTGAATTGTGACCAGCGGGCA GCAGCAGCGGCATGCGACACCGACACCATCAGCGCATCAGCACCACCTGG CCAGCGTTGTAAGGGATTCTCCCACCCTCCCCAAAGAGCCAACGATTCCA CTTGAGACCCAAAAGTCCCAGTTTAAAACCAAAATCAAAATCAGCGGAGC ACCCGCACACCAGCGAGAGCAAGTGGTTTCTACATGATCCGGCGACACGC TGCCCCCCTCTCCGTGCTGCATGCTCCATGCTCCAGCTCAATGTAAATGT TAATTAAAGCCAATTGAGCGCACACCCAAAAACACGCACCAAACTGAAAA CGAATACGAATACGAATCACTCACCCGGAGGAGAAGGCTCCGTTGGACAA GATTTCGCGCTTAACCTGTACAGGCGACAACGGCGGTGGCGGTGGTGCTG CAATAAATGGACATAATTGCTCTAATTGGACAGAGCAGCAGCAGACGCAG TGGCAGTGGCAGTGGGAACGGAGGAGCACCAGCACCAGCACCATCAGCAG CAGCAGCACCCCCCCTTGCAATAGGATGGCACAATTCACACTCTACAACA AACACAGTGCGCCGCCCAGTAGCGAGAGTACGCGTGTGGACTGCGAACAC GTACCGCTGTGCTCGATTAACGATGTGCAGCTAAGGTTCCTGGTGCCCGA CGATCTGACGGAGGTGCGACAGCTGTGCCAAGAATGGTTTCCAATCGACT ATCCACTATCATGGTATGAGGATATTACCTCAAGCACGCGCTTCTTTGCG CTGGCAGCTGTATATAATCTGGCCATAATTGGTTTAATCGTTGCCGAAAT CAAACCCTATCGAAATGTGAACAAGGAGGACAAGGGCATCCTGCCGGACT CGATGGGTCGTTCCGCCGATGTCGGTTATATACTGTCGCTGGGCGTCCAT CGTTCGCATCGACGCAATGGCATCGGATCGCTGCTGTTGGACGCGCTAAT GAACCACCTGACGACGGCCGAGCGGCATTCGGTGAAGGCGATCTTCCTGC ACACGCTGACCACCAATCAACCTGCCATATTTTTCTACGAGAAGAGAAGA TTTACGCTTCACTCATTCCTGCCCTACTACTACAATATACGGGGCAAGGG CAAGGACGGATTCACCTATGTGAACTACATTAACGGCGGCCATCCACCCT GGACTTTATTAGATCACATCAAGCACTACGCGTCGATGGTGCGCCACACC AGCAGCCTTTGCGCCTGGCTGGCCGGACGAGTCCAGCAGGTGGTGCGGTG GTTCTACCACAAGCTGCTCACTCGCTTCAACTTTATCGAGTGAATCTCGA CGGCGCAGCACAAGCACTGGCCAGGCATATACACGCATCCTTCCTAGACA CACGAGCACTTTGAGGGCGATGATGAGTGTGTCCGCCGCATTATGTCATC CCGTCGAGCATAAACAGAAACAGAAACACAAACAAACACAAACATTTATA TGTACTATGGCACCCAATCACCACCACAGACAGACACACCTTCATTATAA ATGTTAGGCAACACCTCCGCAGAATCATTACGTTTTTATACGGAAGCTAA TAGAGAAGATGTGAGACGAGAAGGAGAAGGAGAAGAAGATCTAGCAAAGA ACAACATCAAAGGCATAAGTTGAAAGTTGTAACATAGTTCGCTAAGTGTA TTATTACGTTTTAAAAGATATCTATCTGTTCACTACTGCTGTAAATAGTC TTATGATGTTTTGTTTGAATCGAGCTGTAACCGAGTGATTTGGAATTAGC ATAGCCCCCTTATCTTTTGAATGTAGCCCGTGTGTATGTTTTTCCTAAGT TTTAAGTTCCACGCACAAGACAGTCATTTAGTTTAGCGAAGACAAACAAC AAAGATGCTCATGCTTTAATGCTTAATTTATGAAATCTGCACGTAAATAG CTTTGAACTGAGAATGGCAAGAATATCTATCCAGTTGAATACCCGAACCA ACCATTTAAATTCAAATCCCGTTCGCTGTTTCTATAGTATTTTGTAAAAG TATTTTAATGCATATTGTTTCGCAGCTAAATCTGATTACTTTAGGCACAA TTTATCTAGCAAATTGTAATATTTTTTAAAATAAAAACTTGTAAAGTTAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18177-RB | 2222 | CG18177-RB | 75..2222 | 1..2148 | 10740 | 100 | Plus |
CG18177-RA | 2285 | CG18177-RA | 1014..2285 | 877..2148 | 6360 | 100 | Plus |
CG18177-RA | 2285 | CG18177-RA | 75..953 | 1..879 | 4395 | 100 | Plus |
CG18177.a | 1424 | CG18177.a | 75..788 | 1..714 | 3570 | 100 | Plus |
CG18177.a | 1424 | CG18177.a | 784..1424 | 875..1515 | 3205 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9720567..9721504 | 1211..2148 | 4690 | 100 | Plus |
chr3L | 24539361 | chr3L | 9718832..9719423 | 1..592 | 2915 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 9720065..9720287 | 877..1099 | 1115 | 100 | Plus |
chr3L | 24539361 | chr3L | 9719837..9720004 | 712..879 | 840 | 100 | Plus |
chr3L | 24539361 | chr3L | 9719641..9719764 | 593..716 | 620 | 100 | Plus |
chr3L | 24539361 | chr3L | 9720356..9720473 | 1098..1215 | 575 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9728713..9729651 | 1211..2149 | 4695 | 100 | Plus |
3L | 28110227 | 3L | 9726978..9727569 | 1..592 | 2960 | 100 | Plus |
3L | 28110227 | 3L | 9728211..9728433 | 877..1099 | 1115 | 100 | Plus |
3L | 28110227 | 3L | 9727983..9728150 | 712..879 | 840 | 100 | Plus |
3L | 28110227 | 3L | 9727787..9727909 | 593..715 | 615 | 100 | Plus |
3L | 28110227 | 3L | 9728502..9728619 | 1098..1215 | 575 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9721813..9722751 | 1211..2149 | 4695 | 100 | Plus |
3L | 28103327 | 3L | 9720078..9720669 | 1..592 | 2960 | 100 | Plus |
3L | 28103327 | 3L | 9721311..9721533 | 877..1099 | 1115 | 100 | Plus |
3L | 28103327 | 3L | 9721083..9721250 | 712..879 | 840 | 100 | Plus |
3L | 28103327 | 3L | 9720887..9721009 | 593..715 | 615 | 100 | Plus |
3L | 28103327 | 3L | 9721602..9721719 | 1098..1215 | 575 | 99.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9718832..9719314 | 1..483 | 99 | == | Plus |
chr3L | 9719390..9719423 | 559..592 | 100 | -> | Plus |
chr3L | 9719641..9719761 | 593..713 | 100 | -> | Plus |
chr3L | 9719839..9720003 | 714..878 | 100 | -> | Plus |
chr3L | 9720067..9720287 | 879..1099 | 100 | -> | Plus |
chr3L | 9720358..9720470 | 1100..1212 | 99 | -> | Plus |
chr3L | 9720569..9721471 | 1213..2115 | 96 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RB | 1..768 | 576..1343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RB | 1..768 | 576..1343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naa60-RB | 1..768 | 576..1343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RB | 1..768 | 576..1343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naa60-RB | 1..768 | 576..1343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RB | 49..2196 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RB | 75..2222 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naa60-RB | 84..2231 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RB | 49..2196 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naa60-RB | 84..2231 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9726978..9727569 | 1..592 | 100 | -> | Plus |
3L | 9727787..9727907 | 593..713 | 100 | -> | Plus |
3L | 9727985..9728149 | 714..878 | 100 | -> | Plus |
3L | 9728213..9728433 | 879..1099 | 100 | -> | Plus |
3L | 9728504..9728616 | 1100..1212 | 99 | -> | Plus |
3L | 9728715..9729650 | 1213..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9726978..9727569 | 1..592 | 100 | -> | Plus |
3L | 9727787..9727907 | 593..713 | 100 | -> | Plus |
3L | 9727985..9728149 | 714..878 | 100 | -> | Plus |
3L | 9728213..9728433 | 879..1099 | 100 | -> | Plus |
3L | 9728504..9728616 | 1100..1212 | 99 | -> | Plus |
3L | 9728715..9729650 | 1213..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9726978..9727569 | 1..592 | 100 | -> | Plus |
3L | 9727787..9727907 | 593..713 | 100 | -> | Plus |
3L | 9727985..9728149 | 714..878 | 100 | -> | Plus |
3L | 9728213..9728433 | 879..1099 | 100 | -> | Plus |
3L | 9728504..9728616 | 1100..1212 | 99 | -> | Plus |
3L | 9728715..9729650 | 1213..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9720078..9720669 | 1..592 | 100 | -> | Plus |
arm_3L | 9720887..9721007 | 593..713 | 100 | -> | Plus |
arm_3L | 9721085..9721249 | 714..878 | 100 | -> | Plus |
arm_3L | 9721313..9721533 | 879..1099 | 100 | -> | Plus |
arm_3L | 9721604..9721716 | 1100..1212 | 99 | -> | Plus |
arm_3L | 9721815..9722750 | 1213..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9721085..9721249 | 714..878 | 100 | -> | Plus |
3L | 9720078..9720669 | 1..592 | 100 | -> | Plus |
3L | 9720887..9721007 | 593..713 | 100 | -> | Plus |
3L | 9721313..9721533 | 879..1099 | 100 | -> | Plus |
3L | 9721604..9721716 | 1100..1212 | 99 | -> | Plus |
3L | 9721815..9722750 | 1213..2148 | 100 | Plus |
Translation from 575 to 1342
> LD27619.pep MAQFTLYNKHSAPPSSESTRVDCEHVPLCSINDVQLRFLVPDDLTEVRQL CQEWFPIDYPLSWYEDITSSTRFFALAAVYNLAIIGLIVAEIKPYRNVNK EDKGILPDSMGRSADVGYILSLGVHRSHRRNGIGSLLLDALMNHLTTAER HSVKAIFLHTLTTNQPAIFFYEKRRFTLHSFLPYYYNIRGKGKDGFTYVN YINGGHPPWTLLDHIKHYASMVRHTSSLCAWLAGRVQQVVRWFYHKLLTR FNFIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24673-PA | 254 | GF24673-PA | 1..254 | 1..255 | 1336 | 97.3 | Plus |
Dana\GF12549-PA | 184 | GF12549-PA | 4..139 | 32..186 | 140 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15408-PA | 255 | GG15408-PA | 1..255 | 1..255 | 1356 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15428-PA | 258 | GH15428-PA | 1..258 | 1..255 | 1254 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Naa60-PB | 255 | CG18177-PB | 1..255 | 1..255 | 1370 | 100 | Plus |
Naa60-PA | 276 | CG18177-PA | 1..276 | 1..255 | 1338 | 92.4 | Plus |
Naa60-PC | 239 | CG18177-PC | 1..218 | 1..218 | 1134 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13029-PA | 258 | GI13029-PA | 1..258 | 1..255 | 1262 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16291-PA | 255 | GL16291-PA | 1..255 | 1..255 | 1314 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23434-PA | 255 | GA23434-PA | 1..255 | 1..255 | 1314 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25182-PA | 255 | GM25182-PA | 1..255 | 1..255 | 1367 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14213-PA | 456 | GD14213-PA | 1..234 | 1..234 | 1252 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12125-PA | 258 | GJ12125-PA | 1..258 | 1..255 | 1247 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11823-PA | 256 | GK11823-PA | 1..256 | 1..255 | 1287 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20874-PA | 255 | GE20874-PA | 1..255 | 1..255 | 1363 | 98.8 | Plus |
Translation from 575 to 1342
> LD27619.hyp MAQFTLYNKHSAPPSSESTRVDCEHVPLCSINDVQLRFLVPDDLTEVRQL CQEWFPIDYPLSWYEDITSSTRFFALAAVYNLAIIGLIVAEIKPYRNVNK EDKGILPDSMGRSADVGYILSLGVHRSHRRNGIGSLLLDALMNHLTTAER HSVKAIFLHTLTTNQPAIFFYEKRRFTLHSFLPYYYNIRGKGKDGFTYVN YINGGHPPWTLLYHIKHYASMVRHTSSLCAWLAGRVQQVVRWFYHKLLTR FNFIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Naa60-PB | 255 | CG18177-PB | 1..255 | 1..255 | 1361 | 99.6 | Plus |
Naa60-PA | 276 | CG18177-PA | 1..276 | 1..255 | 1329 | 92 | Plus |
Naa60-PC | 239 | CG18177-PC | 1..218 | 1..218 | 1144 | 98.2 | Plus |