Clone LD27655 Report

Search the DGRC for LD27655

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:276
Well:55
Vector:pOT2
Associated Gene/TranscriptCG10417-RA
Protein status:LD27655.pep: gold
Preliminary Size:2734
Sequenced Size:2510

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10417 2001-01-01 Release 2 assignment
CG10417 2001-07-04 Blastp of sequenced clone
CG10417 2003-01-01 Sim4 clustering to Release 3
CG10417 2008-04-29 Release 5.5 accounting
CG10417 2008-08-15 Release 5.9 accounting
CG10417 2008-12-18 5.12 accounting

Clone Sequence Records

LD27655.complete Sequence

2510 bp (2510 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051748

> LD27655.complete
AGATTTCGCAAATAAGTTTAAGTCGATTTCATTGATATATTAAACTAAGT
ATAGTTTTCCAAAAGTCCTACCAAGGACTATACTTCTTACTACGTTAACT
TACATTTGTAGTAATCACCGTTTTAAATAATTATATATAATAAAATTATT
TTTCTAACTAAAAAACATTACAGTAAATGTTTGCAAGTACAGCCTATACG
TAGAATTTTATGCACAAAACCTTAGCTTGGTTACAAGTTGTACAATATGG
GTGCCTATTTGTCCCATCCGAAAACGGATAAAACATCCACAGATCAGTTT
AATGAATTGCTAGCCGTTGGAGCTAGCTCTATGCAAGGATGGCGGAACAG
CCAAGAGGATGCACATAATTCTATTTTAAATTTTGACAACAACACATCGT
TTTTTGCTGTGTATGATGGTCACGGCGGAGCTGAGGTAGCGCAATATTGT
GCTGACAAGTTACCACATTTTCTTAAAAACCTTGAAACCTACAAAAATGG
ACAATTTGAAGTGGCACTCAAGGAAGCATTTTTGGGATTTGACAAAACGC
TGCTTGATCCATCGATAGTCAGCATACTAAAAATATTGGCTGGGGAACAC
AACTTCGTGGATGCCGAAGCGGACGATTACGAAGAAGAAGATTTAGCTGA
ATTGCAAGAGGAAAGCAATTTACCACTAAATGAAGTTCTGGAAAAATACA
AAGGTCTTCCGCAAAAAAAAGACTTGGATCTTAAGAGTTCTGACCATAAA
GAAAATTTCAAAATGCGCTCTCCATATTTTCGCGGGCGCCGAGCTGCAGC
ATTAGCTGCTGAAGCTACTAATAAAGCTGTAATGGACCCCTCTGCAAAGC
CAGATGGTTCTTCCACCTCCGCAGCAGCGGCTGCAGCAGCGCTATCCGCC
GATGGTGTAGCTAATTCCCGTAATCCGAGCAATGTTGTAAATCCTATGGC
TGGGGCTGATAGCAATACCACTACCAGTATCAACGATTTATCCACCAAGA
ATGCTGCATTAAAAGATGATTCTGTTAATGACCAAAATGAGGGCTCAAAT
GGAACCGATTTCAAGCATACGTTGGTTTCTTCTAGTAATAAAAAATTATT
CGCTACTGGTTCTAACGACATGACCGAATTAAATCAGTCCTCGAAAAACG
AGTTCACAAACTCATCTACAAGCAAAGAGTTTGAAAGGAATATAAACAGC
TCCCAAGACGATGAGTTCACAGACGATGATGCGGACTATGAAGAAAATGA
TAATGTCAAGAGTCCTGATACTTCATCCGCAGAAAGCTCTGACTGCACTG
AAAATGATGACGACGGTGACGAAGATGGTAATGAGGATAGTGATGAAGAA
GAGACTGATGAAGATCAGATGGCTAATGATAATTTTTGTGCAAATATGAT
TGAGGAACCTGGAAAAGATAGTGGATGTACTGCAGTTGTATGTTTGTTGC
AAGGTCGGGACCTTTACGTGGCAAACGCAGGGGACTCGCGATGTGTTATA
TCACGCAGTGGACAAGCCATTGAAATGAGCATCGACCACAAGCCCGAAGA
TGACGAAGAAGCCTCGCGCATAATAAAGGCAGGTGGTCGGGTTACACTTG
ATGGACGCGTAAATGGAGGCCTTAATTTGTCTCGAGCCCTTGGAGACCAT
GCCTATAAAACGAACGTAACCCTACCAGCTGAGGAACAAATGATATCTGC
CCTACCTGACATAAAGAAGCTAATTATCACGCCAGAGGACGAGTTTATGG
TACTGGCCTGTGATGGTATATGGAATTATATGTCTAGTGAGGAAGTTGTA
GAATTTGTACGTTGCAGACTAAAAGATAACAAAAAATTGTCAACGATTTG
TGAAGAGCTTTTTGATAACTGTTTAGCTCCGAATACAATGGGTGATGGGA
CTGGATGCGACAACATGACTGCCGTAATCGTCCAGTTTAAGAAAAAGCTG
CAAGAGCTGCAGTCCACCATTCCTCCAAATCAAACTGAAGATAAGTTACT
TAAGACATCTGAAAATGTTTCACATAGTTTAAATGATCAAAGTGCGTCTA
AGCGATGCGCATCACAAAATGCTGATGCTGACGACGAAATTCTTGAAAAA
AACAACTCTAAACGATTAAAAACTGATCTGGAACAAGAAAACATTAAAGA
CAGAACCCCATCACCGAGCAATCAGAATGAAGACCCTACCCAGAAGGCCA
TTAAGGAAGTTACTATAATTGTTTCTTCATCGTAATTTACTTGACATTCG
GAAGTGCACTCATCTTAATTCACATTTAATCGTAACATGCATTTTAATTG
TAGACATTTAAGCTTGTAGATCGAAGTGCGAAAAACTGTGCCACTTTTCA
AAATGATATTGATGACAGGTTTATGCAAACAAATATTCTTTAATAAGAAC
ATATATTAACTATATTTTAAGAAATATTTATATTTCTTTCTCGTAAATTG
CTAAATAAAGTCGCAATGAAATAAATCTTTTATTTATAGAGCAAAAAAAA
AAAAAAAAAA

LD27655.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10417-RA 2582 CG10417-RA 49..2545 1..2497 12485 100 Plus
CG10417-RB 2418 CG10417-RB 76..2418 155..2497 11640 99.7 Plus
CG10417.a 2337 CG10417.a 69..2337 229..2497 11345 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:36:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 1249010..1249981 1327..356 4815 99.7 Minus
chr2R 21145070 chr2R 1247743..1248379 2492..1856 3185 100 Minus
chr2R 21145070 chr2R 1248431..1248961 1857..1327 2640 99.8 Minus
chr2R 21145070 chr2R 1250240..1250470 231..1 1155 100 Minus
chr2R 21145070 chr2R 1250039..1250168 358..229 650 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:19:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:36:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5361598..5362569 1327..356 4860 100 Minus
2R 25286936 2R 5360326..5360967 2497..1856 3210 100 Minus
2R 25286936 2R 5361019..5361549 1857..1327 2655 100 Minus
2R 25286936 2R 5362828..5363058 231..1 1155 100 Minus
2R 25286936 2R 5362627..5362756 358..229 650 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 5362797..5363768 1327..356 4860 100 Minus
2R 25260384 2R 5361525..5362166 2497..1856 3210 100 Minus
2R 25260384 2R 5362218..5362748 1857..1327 2655 100 Minus
2R 25260384 2R 5364027..5364257 231..1 1155 100 Minus
2R 25260384 2R 5363826..5363955 358..229 650 100 Minus
Blast to na_te.dros performed 2019-03-16 16:36:31
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 1416..1483 189..121 135 68.1 Minus
Stalker2 7672 Stalker2 STALKER2 7672bp 1438..1514 121..189 124 67.5 Plus

LD27655.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:37:39 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 1247743..1248377 1858..2492 100 <- Minus
chr2R 1248431..1248961 1327..1857 99 <- Minus
chr2R 1249011..1249979 358..1326 99 <- Minus
chr2R 1250040..1250167 230..357 100 <- Minus
chr2R 1250242..1250470 1..229 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:07:05 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RB 1..1989 247..2235 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:20:55 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RB 1..1989 247..2235 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:19:41 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RA 1..1989 247..2235 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:52:35 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RB 1..1989 247..2235 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:35:25 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RA 1..1989 247..2235 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:17:30 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RA 46..2537 1..2492 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:20:55 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RA 46..2537 1..2492 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:41 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RA 47..2538 1..2492 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:52:35 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RA 46..2537 1..2492 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:35:25 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
CG10417-RA 47..2538 1..2492 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:39 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5360331..5360965 1858..2492 100 <- Minus
2R 5361019..5361549 1327..1857 100 <- Minus
2R 5361599..5362567 358..1326 100 <- Minus
2R 5362628..5362755 230..357 100 <- Minus
2R 5362830..5363058 1..229 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:39 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5360331..5360965 1858..2492 100 <- Minus
2R 5361019..5361549 1327..1857 100 <- Minus
2R 5361599..5362567 358..1326 100 <- Minus
2R 5362628..5362755 230..357 100 <- Minus
2R 5362830..5363058 1..229 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:39 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5360331..5360965 1858..2492 100 <- Minus
2R 5361019..5361549 1327..1857 100 <- Minus
2R 5361599..5362567 358..1326 100 <- Minus
2R 5362628..5362755 230..357 100 <- Minus
2R 5362830..5363058 1..229 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:41 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1250335..1250563 1..229 100   Minus
arm_2R 1247836..1248470 1858..2492 100 <- Minus
arm_2R 1248524..1249054 1327..1857 100 <- Minus
arm_2R 1249104..1250072 358..1326 100 <- Minus
arm_2R 1250133..1250260 230..357 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:31:06 Download gff for LD27655.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5361530..5362164 1858..2492 100 <- Minus
2R 5362218..5362748 1327..1857 100 <- Minus
2R 5362798..5363766 358..1326 100 <- Minus
2R 5363827..5363954 230..357 100 <- Minus
2R 5364029..5364257 1..229 100   Minus

LD27655.pep Sequence

Translation from 246 to 2234

> LD27655.pep
MGAYLSHPKTDKTSTDQFNELLAVGASSMQGWRNSQEDAHNSILNFDNNT
SFFAVYDGHGGAEVAQYCADKLPHFLKNLETYKNGQFEVALKEAFLGFDK
TLLDPSIVSILKILAGEHNFVDAEADDYEEEDLAELQEESNLPLNEVLEK
YKGLPQKKDLDLKSSDHKENFKMRSPYFRGRRAAALAAEATNKAVMDPSA
KPDGSSTSAAAAAAALSADGVANSRNPSNVVNPMAGADSNTTTSINDLST
KNAALKDDSVNDQNEGSNGTDFKHTLVSSSNKKLFATGSNDMTELNQSSK
NEFTNSSTSKEFERNINSSQDDEFTDDDADYEENDNVKSPDTSSAESSDC
TENDDDGDEDGNEDSDEEETDEDQMANDNFCANMIEEPGKDSGCTAVVCL
LQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVT
LDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEF
MVLACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGD
GTGCDNMTAVIVQFKKKLQELQSTIPPNQTEDKLLKTSENVSHSLNDQSA
SKRCASQNADADDEILEKNNSKRLKTDLEQENIKDRTPSPSNQNEDPTQK
AIKEVTIIVSSS*

LD27655.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18976-PA 707 GF18976-PA 1..588 1..581 1737 64.7 Plus
Dana\GF24758-PA 349 GF24758-PA 114..286 392..564 413 50 Plus
Dana\GF24378-PA 374 GF24378-PA 115..283 392..562 405 48.5 Plus
Dana\GF20730-PA 366 GF20730-PA 111..276 390..562 332 41.6 Plus
Dana\GF23353-PA 371 GF23353-PA 117..309 390..592 311 36.9 Plus
Dana\GF24378-PA 374 GF24378-PA 1..105 1..103 226 45.7 Plus
Dana\GF24758-PA 349 GF24758-PA 1..104 1..103 219 45.7 Plus
Dana\GF23353-PA 371 GF23353-PA 1..107 1..104 173 34.6 Plus
Dana\GF20730-PA 366 GF20730-PA 1..102 1..99 161 33.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10863-PA 664 GG10863-PA 1..664 1..662 2816 86.8 Plus
Dere\GG14729-PA 353 GG14729-PA 113..284 390..562 430 51.4 Plus
Dere\GG14269-PA 370 GG14269-PA 114..310 392..601 407 42.9 Plus
Dere\GG12191-PA 367 GG12191-PA 111..273 390..558 329 42.9 Plus
Dere\GG11671-PA 374 GG11671-PA 117..309 390..592 315 36.9 Plus
Dere\GG14729-PA 353 GG14729-PA 1..105 1..103 232 46.7 Plus
Dere\GG14269-PA 370 GG14269-PA 1..104 1..103 216 46.7 Plus
Dere\GG12191-PA 367 GG12191-PA 1..105 1..102 187 33.3 Plus
Dere\GG11671-PA 374 GG11671-PA 1..105 1..102 179 35.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23728-PA 302 GH23728-PA 1..230 384..606 994 80.4 Plus
Dgri\GH20157-PA 774 GH20157-PA 1..217 1..208 672 71 Plus
Dgri\GH15705-PA 335 GH15705-PA 114..283 392..562 417 51.5 Plus
Dgri\GH16235-PA 323 GH16235-PA 113..284 390..562 402 48.6 Plus
Dgri\GH18902-PA 371 GH18902-PA 113..284 386..564 320 41.3 Plus
Dgri\GH16235-PA 323 GH16235-PA 1..104 1..102 237 46.2 Plus
Dgri\GH15705-PA 335 GH15705-PA 1..104 1..103 228 47.6 Plus
Dgri\GH18902-PA 371 GH18902-PA 1..105 1..102 190 38.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10417-PB 662 CG10417-PB 1..662 1..662 3413 100 Plus
CG10417-PA 662 CG10417-PA 1..662 1..662 3413 100 Plus
Ppm1-PA 352 CG12169-PA 115..284 392..562 427 49.7 Plus
CG17746-PB 371 CG17746-PB 114..353 392..653 398 38.2 Plus
CG17746-PA 371 CG17746-PA 114..353 392..653 398 38.2 Plus
CG6036-PA 371 CG6036-PA 116..281 390..562 314 41 Plus
alph-PC 368 CG1906-PC 114..359 387..638 312 34.5 Plus
alph-PD 368 CG1906-PD 114..359 387..638 312 34.5 Plus
alph-PA 368 CG1906-PA 114..359 387..638 312 34.5 Plus
alph-PB 371 CG1906-PB 114..359 387..638 312 34.5 Plus
alph-PE 374 CG1906-PE 114..359 387..638 312 34.5 Plus
alph-PF 332 CG1906-PF 114..309 387..592 311 37.4 Plus
Ppm1-PA 352 CG12169-PA 1..105 1..103 235 48.6 Plus
CG7115-PC 469 CG7115-PC 267..437 392..574 225 34.8 Plus
CG7115-PD 471 CG7115-PD 269..439 392..574 225 34.8 Plus
CG7115-PE 524 CG7115-PE 322..492 392..574 225 34.8 Plus
CG7115-PB 524 CG7115-PB 322..492 392..574 225 34.8 Plus
CG7115-PA 524 CG7115-PA 322..492 392..574 225 34.8 Plus
CG17746-PB 371 CG17746-PB 1..104 1..103 201 45.7 Plus
CG17746-PA 371 CG17746-PA 1..104 1..103 201 45.7 Plus
CG10376-PA 428 CG10376-PA 259..424 392..569 196 30.8 Plus
CG6036-PA 371 CG6036-PA 5..109 1..102 180 32.4 Plus
alph-PF 332 CG1906-PF 1..105 1..102 173 35.2 Plus
alph-PC 368 CG1906-PC 1..105 1..102 173 35.2 Plus
alph-PD 368 CG1906-PD 1..105 1..102 173 35.2 Plus
alph-PA 368 CG1906-PA 1..105 1..102 173 35.2 Plus
alph-PB 371 CG1906-PB 1..105 1..102 173 35.2 Plus
alph-PE 374 CG1906-PE 1..105 1..102 173 35.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:37:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20667-PA 747 GI20667-PA 1..689 1..627 1772 59.1 Plus
Dmoj\GI12760-PA 328 GI12760-PA 115..283 392..562 423 49.1 Plus
Dmoj\GI16663-PA 329 GI16663-PA 115..284 392..562 415 50.3 Plus
Dmoj\GI23119-PA 371 GI23119-PA 113..284 386..564 316 41.3 Plus
Dmoj\GI16663-PA 329 GI16663-PA 1..105 1..103 248 48.6 Plus
Dmoj\GI21350-PA 520 GI21350-PA 319..489 392..574 233 33.7 Plus
Dmoj\GI12760-PA 328 GI12760-PA 1..105 1..103 223 46.7 Plus
Dmoj\GI23119-PA 371 GI23119-PA 1..105 1..102 184 37.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:37:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11046-PA 668 GL11046-PA 1..647 1..606 1801 63.8 Plus
Dper\GL22499-PA 319 GL22499-PA 115..286 392..564 429 49.1 Plus
Dper\GL22500-PA 319 GL22500-PA 113..286 390..564 426 48.6 Plus
Dper\GL21276-PA 375 GL21276-PA 115..283 392..562 408 49.1 Plus
Dper\GL26287-PA 366 GL26287-PA 110..277 388..562 340 42.3 Plus
Dper\GL22500-PA 319 GL22500-PA 1..105 1..103 234 46.7 Plus
Dper\GL21276-PA 375 GL21276-PA 1..105 1..103 226 45.7 Plus
Dper\GL22499-PA 319 GL22499-PA 1..105 1..103 223 45.7 Plus
Dper\GL26287-PA 366 GL26287-PA 1..102 1..99 183 37.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:37:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22252-PA 710 GA22252-PA 1..710 1..661 1818 60.4 Plus
Dpse\GA24460-PA 319 GA24460-PA 113..286 390..564 431 49.1 Plus
Dpse\GA24456-PA 319 GA24456-PA 115..286 392..564 430 49.1 Plus
Dpse\GA14642-PA 375 GA14642-PA 115..283 392..562 408 49.1 Plus
Dpse\GA28805-PA 366 GA28805-PA 110..277 388..562 341 42.3 Plus
Dpse\GA24460-PA 319 GA24460-PA 1..105 1..103 235 46.7 Plus
Dpse\GA14642-PA 375 GA14642-PA 1..105 1..103 226 45.7 Plus
Dpse\GA24456-PA 319 GA24456-PA 1..105 1..103 223 45.7 Plus
Dpse\GA28805-PA 366 GA28805-PA 1..102 1..99 179 36.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:37:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11092-PA 662 GM11092-PA 1..662 1..662 3069 94.4 Plus
Dsec\GM14345-PA 353 GM14345-PA 115..284 392..562 441 50.9 Plus
Dsec\GM14062-PA 370 GM14062-PA 114..282 392..562 418 49.7 Plus
Dsec\GM10187-PA 305 GM10187-PA 50..211 390..558 325 42 Plus
Dsec\GM12795-PA 374 GM12795-PA 117..309 390..592 314 36.9 Plus
Dsec\GM14345-PA 353 GM14345-PA 1..105 1..103 246 48.6 Plus
Dsec\GM14062-PA 370 GM14062-PA 1..104 1..103 213 45.7 Plus
Dsec\GM12795-PA 374 GM12795-PA 1..105 1..102 178 35.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:37:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10360-PA 485 GD10360-PA 1..353 1..353 1604 93.2 Plus
Dsim\GD10360-PA 485 GD10360-PA 364..485 541..662 578 91.8 Plus
Dsim\GD17616-PA 353 GD17616-PA 113..284 390..562 440 50.3 Plus
Dsim\GD13337-PA 370 GD13337-PA 114..310 392..601 418 43.3 Plus
Dsim\GD18139-PA 305 GD18139-PA 50..211 390..558 323 42 Plus
Dsim\GD21442-PA 374 GD21442-PA 117..309 390..592 314 36.9 Plus
Dsim\GD17616-PA 353 GD17616-PA 1..105 1..103 241 47.6 Plus
Dsim\GD13337-PA 370 GD13337-PA 1..104 1..103 213 45.7 Plus
Dsim\GD21442-PA 374 GD21442-PA 1..105 1..102 178 35.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:37:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20416-PA 729 GJ20416-PA 1..729 1..662 1837 59.7 Plus
Dvir\GJ15526-PA 329 GJ15526-PA 115..283 392..562 444 52 Plus
Dvir\GJ12915-PA 335 GJ12915-PA 115..284 392..562 420 49.1 Plus
Dvir\GJ10608-PA 371 GJ10608-PA 113..284 386..564 317 41.3 Plus
Dvir\GJ11141-PA 520 GJ11141-PA 289..518 359..602 237 31 Plus
Dvir\GJ12915-PA 335 GJ12915-PA 1..105 1..103 231 45.7 Plus
Dvir\GJ15526-PA 329 GJ15526-PA 1..105 1..103 225 46.7 Plus
Dvir\GJ10608-PA 371 GJ10608-PA 1..105 1..102 189 38.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:37:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10630-PA 721 GK10630-PA 408..721 358..662 1076 68.2 Plus
Dwil\GK16640-PA 378 GK16640-PA 125..296 392..564 435 49.7 Plus
Dwil\GK10512-PA 391 GK10512-PA 115..283 392..562 406 48.5 Plus
Dwil\GK11903-PA 371 GK11903-PA 113..309 386..592 319 37.7 Plus
Dwil\GK22356-PA 170 GK22356-PA 3..122 441..562 258 45.1 Plus
Dwil\GK16640-PA 378 GK16640-PA 11..115 1..103 230 44.8 Plus
Dwil\GK10512-PA 391 GK10512-PA 1..105 1..103 229 46.7 Plus
Dwil\GK11903-PA 371 GK11903-PA 1..107 1..104 185 36.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:37:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11243-PA 634 GE11243-PA 1..634 1..662 2652 84.6 Plus
Dyak\GE21091-PA 358 GE21091-PA 113..284 390..562 420 49.1 Plus
Dyak\GE20697-PA 370 GE20697-PA 114..282 392..562 411 49.1 Plus
Dyak\GE10634-PA 367 GE10634-PA 112..273 390..558 336 43.8 Plus
Dyak\GE23859-PA 374 GE23859-PA 117..309 390..592 315 36.9 Plus
Dyak\GE21091-PA 358 GE21091-PA 1..105 1..103 233 46.7 Plus
Dyak\GE20697-PA 370 GE20697-PA 1..104 1..103 216 46.7 Plus
Dyak\GE10634-PA 367 GE10634-PA 1..102 1..99 181 33.3 Plus
Dyak\GE23859-PA 374 GE23859-PA 1..105 1..102 179 35.2 Plus

LD27655.hyp Sequence

Translation from 246 to 2234

> LD27655.hyp
MGAYLSHPKTDKTSTDQFNELLAVGASSMQGWRNSQEDAHNSILNFDNNT
SFFAVYDGHGGAEVAQYCADKLPHFLKNLETYKNGQFEVALKEAFLGFDK
TLLDPSIVSILKILAGEHNFVDAEADDYEEEDLAELQEESNLPLNEVLEK
YKGLPQKKDLDLKSSDHKENFKMRSPYFRGRRAAALAAEATNKAVMDPSA
KPDGSSTSAAAAAAALSADGVANSRNPSNVVNPMAGADSNTTTSINDLST
KNAALKDDSVNDQNEGSNGTDFKHTLVSSSNKKLFATGSNDMTELNQSSK
NEFTNSSTSKEFERNINSSQDDEFTDDDADYEENDNVKSPDTSSAESSDC
TENDDDGDEDGNEDSDEEETDEDQMANDNFCANMIEEPGKDSGCTAVVCL
LQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVT
LDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEF
MVLACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGD
GTGCDNMTAVIVQFKKKLQELQSTIPPNQTEDKLLKTSENVSHSLNDQSA
SKRCASQNADADDEILEKNNSKRLKTDLEQENIKDRTPSPSNQNEDPTQK
AIKEVTIIVSSS*

LD27655.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:20:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG10417-PB 662 CG10417-PB 1..662 1..662 3413 100 Plus
CG10417-PA 662 CG10417-PA 1..662 1..662 3413 100 Plus
Ppm1-PA 352 CG12169-PA 115..284 392..562 427 49.7 Plus
CG17746-PB 371 CG17746-PB 114..353 392..653 398 38.2 Plus
CG17746-PA 371 CG17746-PA 114..353 392..653 398 38.2 Plus
Ppm1-PA 352 CG12169-PA 1..105 1..103 235 48.6 Plus
CG17746-PB 371 CG17746-PB 1..104 1..103 201 45.7 Plus